Os03g0219300

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Revision as of 12:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0219300| Description = Similar to Tubulin alpha-2 chain (Alpha-2 tubulin)| Version = NM_001055935.1 GI:115451598 GeneID:4332083| Length = 3...")
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Gene Name

Os03g0219300

Description

Similar to Tubulin alpha-2 chain (Alpha-2 tubulin)

Version

NM_001055935.1 GI:115451598 GeneID:4332083

Length

3635 bp

Definition

Oryza sativa Japonica Group Os03g0219300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6303165..6306799

Sequence Coding Region

6303329..6303641,6303734..6304242,6305324..6305523,6305967..6306181,6306618..6306730

Expression

GEO Profiles:Os03g0219300

Genome Context

<gbrowseImage1> name=NC_008396:6303165..6306799 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6303165..6306799 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagataataagcatccacatagggcaggcgggcatccaggtggggaattcttgctgggaactatactgcctcgagcatggcatccagccggacggcctcatgcccagcgacacaactcctggaattgcaagggatgcattcaacacgttcttcagcgagacgagttcaggcaagcacgtcccaagggcgttgttcgtcgacctggagcccacggtgattgatgaggtgaagaccgggccataccgccagctcttccacccagagcagctcatctcctacaaggaagacgctgctaacaactttgctcgtgggcactacacagttggaagagaggtggtagatctttgccttgatcgactaagaaaactggcagataactgcactggtctccaaggttttctggttttcaatgctgttggtggaggaaccggctctggacttggttcattacttttggagcgcctatcagtagattacggtaggaagtcgaagctcgggttcacaatatatccttcaccacagatctcaacggccgtggtggagccttacaacagcgtgctctcgacccactccctgatcgagcacaccgacgtcgtcgtcctcctggacaacgaggccatctacgacatctgcaagaggtcgctggacatcgagcggccgacgtacaccaacctgaacaggctcatctcccaggtgatctcgtcgctgaccacgtcgctgcggttcgacggcgccatcaacgtcgacatcaccgagttccagaccaacctggtgccgtacccgaggatccacttcatgctgtcctcctacgcccccatcatctccgtcgagaaggcgttccacgagcagcactccgtcccggagatcaccaactccgtcttcgagcccgccagcgtcatggccaagtgcgaccccaggcacggcaagtacatggcctgctgcctgatgtaccgcggcgacgtcgtccccaaggacgtcaacgccgccgtccactccatcaagaccaggaggactgtgcagttcgtcgactggtgtccgacagggttcaagtgcgggataaactaccagccgccgacggcggtgccgggaggggacctggcgaaggtgaggagggcggtgtgcatgatcagcaacaacacggcggtggcggaggtgttctcgcggatcgaccgcaagttcgacctcatgtacgccaagcgcgcgttcgtgcactggtacgtgggcgaagggatggaggaaggggagttctccgaggccagggaggacctcgccgcgctggagaaggactacgaggaggtcggcgccgaagtcgaggacgacgacgaggaacagggcgagtactga</cdnaseq>

Protein Sequence

<aaseq>MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGI ARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANN FARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD YGRKSKLGFTIYPSPQISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLD IERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPII SVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHS IKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRID RKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEVEDDDEEQGEY</aaseq>

Gene Sequence

<dnaseqindica>3159..3471#2558..3066#1277..1476#619..833#70..182#gtcttcctctgaaccctgaaccaatcccgaactctgaactctgaaggctgcagagacaggcagagagatatgagggagataataagcatccacatagggcaggcgggcatccaggtggggaattcttgctgggaactatactgcctcgagcatggcatccagccggacggcctcatgcccaggttcttctcgatcccaattcttgctcgtctgcatctcttgctgtcttttcctacttaattttgtgaaattctgatattcggatgatggttttgtcctgtttggttggttcttgctgtagcctaaaaaagaattgatcttgaggagaattttggggcagagtctccagctccagtcatgtatgacaatcagaagtgaaattagcgatttttattcgatgtttgatttgcaccatgcatgctagcactgttcttgtagagatgctatctgtgaatctgtgatccccaagccggttgctttgagagtagaaagcctgtgccttttttgtgaagcgaatttcatttcaagaagaatactagtctgtgacttgctgcggtgcctagtggctcctagtttacgatatcctaatccttggtcatatctgacgcttgcttgcagcgacacaactcctggaattgcaagggatgcattcaacacgttcttcagcgagacgagttcaggcaagcacgtcccaagggcgttgttcgtcgacctggagcccacggtgattgatgaggtgaagaccgggccataccgccagctcttccacccagagcagctcatctcctacaaggaagacgctgctaacaactttgctcgtgggcactacacaggtgtgatgcttaccctgaaactgagccattttgcagaaataaaatgtgtctatgaaaatgtctaaaccaacatattgatatactccaactagaatagtattcacaagaaacattctacaggtatgattgatccacaaagatatggtttgggtggatttagaggagtctgaatccatgatattgcttacatatccttgggatccataaggattattgctcacataaggaataacattaattgtttataacttatatccttggggtgacttgtaataataatttaggaacttacgacatgccgactattttttagtgaaaaatatgacgccataaatttagcttcctccataaataaattgtcatactagagaaactgtcatattcctttataatgaaaatatttttttagtaatgattcaaatccttttttttttctgctgcagttggaagagaggtggtagatctttgccttgatcgactaagaaaactggcagataactgcactggtctccaaggttttctggttttcaatgctgttggtggaggaaccggctctggacttggttcattacttttggagcgcctatcagtagattacggtaggaagtcgaagctcgggttcacaatatatccttcaccacaggtaatcaagaaaagtattcatgatttgttaccatgtttgtgttcattacagcgtattgtagtgccatggaaaaaaatagaatactccagcaaaagaatgtcttctgtgatgttgaatcatttatttgacaagtgcatggataaaattctcagggaaaaccgaagtaaattatgttcatcagcaaatgcaatttcttataaaactgattctcccatgatcctaaacacatgtccaattttcagcatatttttcattccatcattatctcttttttttcgaaaggccattccataagtatctgaaaatgaccacagtaactactgtaaacatctgattcttatgattaaaaaaaatctacatatgtctgccggaccctattttgaatagaaagacccttccaaacaatctaatctttatggaagacttaatctaaaaaaatctttatggaagagctgtgcaaaattacgtaatcaccaactgttcatatgtccttatccaaaggcgtagaatgtaggcaggtgtaccttcacactttttgtgggagcaacatcaacctgttattgatggaaacaactgtttttctttttatactacttcctccgttttacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtatgaactatttccttgataatttttacagaggtcagtataggtctataagagtcagatataggacaatacatcatctacataatcgagagcgagtgaaaaaaaaagttatttttagttttcttttttcagaaggctgtgaaccatactttaatttaactatgtaagactattaataatcgtactagtatttttttatgtcatcatcatgcatgcacatcatgtcagatactcagatatctcaatgcaaggtaaacatgtaccctccgaatggactagagaagctaaatttgtcgatgttaacatacaagctctgtactgaaaaccactccctgtgtgttgcagatctcaacggccgtggtggagccttacaacagcgtgctctcgacccactccctgatcgagcacaccgacgtcgtcgtcctcctggacaacgaggccatctacgacatctgcaagaggtcgctggacatcgagcggccgacgtacaccaacctgaacaggctcatctcccaggtgatctcgtcgctgaccacgtcgctgcggttcgacggcgccatcaacgtcgacatcaccgagttccagaccaacctggtgccgtacccgaggatccacttcatgctgtcctcctacgcccccatcatctccgtcgagaaggcgttccacgagcagcactccgtcccggagatcaccaactccgtcttcgagcccgccagcgtcatggccaagtgcgaccccaggcacggcaagtacatggcctgctgcctgatgtaccgcggcgacgtcgtccccaaggacgtcaacgccgccgtccactccatcaagaccaggaggactgtgcagttcgtcgactggtacgttaactccatcatctcgctgaattccagagattttagccggagatgatgacgatgatgatgacgaagacggtgatcttgtgtttcaggtgtccgacagggttcaagtgcgggataaactaccagccgccgacggcggtgccgggaggggacctggcgaaggtgaggagggcggtgtgcatgatcagcaacaacacggcggtggcggaggtgttctcgcggatcgaccgcaagttcgacctcatgtacgccaagcgcgcgttcgtgcactggtacgtgggcgaagggatggaggaaggggagttctccgaggccagggaggacctcgccgcgctggagaaggactacgaggaggtcggcgccgaagtcgaggacgacgacgaggaacagggcgagtactgatcgggctagcctgctaggtgaatctagcacggtagataaaccgcaagtttgtaaggtcggtggaagggggtctctcggtttacatggactcttgtgactttgtggtgtgagagtgggttttgttgtacttgcatcacaaaaaataaaagaattcgtcagaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0219300, RefSeq:Os03g0219300