Os03g0220100

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0220100| Description = Similar to Very-long-chain fatty acid condensing enzyme CUT1| Version = NM_001055941.1 GI:115451610 GeneID:4332090| ...")
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Gene Name

Os03g0220100

Description

Similar to Very-long-chain fatty acid condensing enzyme CUT1

Version

NM_001055941.1 GI:115451610 GeneID:4332090

Length

2057 bp

Definition

Oryza sativa Japonica Group Os03g0220100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6330128..6332184

Sequence Coding Region

6330433..6331206,6331300..6332010

Expression

GEO Profiles:Os03g0220100

Genome Context

<gbrowseImage1> name=NC_008396:6330128..6332184 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6330128..6332184 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgggggcggcggggtactccgggtcggtgaagctgaagtacgtgaagctggggtaccagtatctggtgaaccacttcctgacgctgctgctggtgccggtgatggcggcgacggcgctggagctggcgcggatggggcccggtgagctgctgtcgctgtggcggtcgctgcagctcgacctcgtccacatcctctgctcggtgttcctcgtcgtgttcgtcggcacggtgtacttcatgtcgcggccaaggccggtgtacctcgtcgactactcctgctacaagccgccgcccagctgccgggtgccgttcgccacgttcatggagcacacgcgcctcatcaccgacgacgagaagagcgtgcggttccagaccaggatcctcgagcggtcggggctcggggaggagacctgcctcccgccggccaaccactacatcccgcctaacccgtccatggaggcgtcgcgcgccgaggcccagctcgtaatcttctccgccatcgacgacctcgtccgccgcaccggactcaagcccaaggacatcgacatcctcgtcgtcaactgcagtctcttctccccgacaccgtcgctctccgccatgatcatcaacaagtacaagctccgcagcaacatccgcagcttcaacctgtccggcatgggctgcagcgccggcctcatctccctcgacctcgcccgcgacatgctccaggtgcatcccaactcgaacgcgctggtggtgtcgacggagatcatcacaccaaacttctactggggaacccggcgggacatgatgctgcccaactgcctgttccggatgggcgcggcggcgatcctgctgtcgaacaggaggagggaggcgaggagggccaagtacaggctgatgcacgtggtccgcacgcacaagggcgccgacgaccgcgcgtaccggtgcgtgtacgaggaggaggacgagcaggggcactcggggatctcgctgtccaaggagctgatggccatcgccggcgacgcgctcaagtcgaacatcaccaccatcggcccgctggtgctgcccatgtcggagcagctgctcttcttcttccgcctcgtcggccgcaagctcatcaacaagaagtggaagccgtacatcccggacttcaagctggcgttcgagcacttctgcatccacgccgggggacgcgccgtgatcgacgagctgcagaagaacctggacctgtccgcgcagcacgtggaggcgtcccgcatgacgctgcaccggttcggcaacacgtcgagcagctcgctctggtacgagctcgcctacatcgaggccaaggggcgcatgcgccgcggcgaccgcgtctggcagatcggcttcggcagcggattcaagtgcaacagcgccgtctggaagtgcctccgcacagtcaagacgcccgccgacgggccgtgggacgactgcatccaccgctaccccgtcgacatcccggaggtcgtcaagctgtga</cdnaseq>

Protein Sequence

<aaseq>MPGAAGYSGSVKLKYVKLGYQYLVNHFLTLLLVPVMAATALELA RMGPGELLSLWRSLQLDLVHILCSVFLVVFVGTVYFMSRPRPVYLVDYSCYKPPPSCR VPFATFMEHTRLITDDEKSVRFQTRILERSGLGEETCLPPANHYIPPNPSMEASRAEA QLVIFSAIDDLVRRTGLKPKDIDILVVNCSLFSPTPSLSAMIINKYKLRSNIRSFNLS GMGCSAGLISLDLARDMLQVHPNSNALVVSTEIITPNFYWGTRRDMMLPNCLFRMGAA AILLSNRRREARRAKYRLMHVVRTHKGADDRAYRCVYEEEDEQGHSGISLSKELMAIA GDALKSNITTIGPLVLPMSEQLLFFFRLVGRKLINKKWKPYIPDFKLAFEHFCIHAGG RAVIDELQKNLDLSAQHVEASRMTLHRFGNTSSSSLWYELAYIEAKGRMRRGDRVWQI GFGSGFKCNSAVWKCLRTVKTPADGPWDDCIHRYPVDIPEVVKL</aaseq>

Gene Sequence

<dnaseqindica>979..1752#175..885#ccatcaccaacacaccactgcaaacccatccgcctccgcaccgcatcgcacctacaaattgtgcacgctgcaccgctcaaaaaaaagaagaaactaaagtcgtacgtaggacgcggcgtgcgagcgttggtgcggtgcgcggcggcgcgcggggaagtagtgagagcatcgatcatgccgggggcggcggggtactccgggtcggtgaagctgaagtacgtgaagctggggtaccagtatctggtgaaccacttcctgacgctgctgctggtgccggtgatggcggcgacggcgctggagctggcgcggatggggcccggtgagctgctgtcgctgtggcggtcgctgcagctcgacctcgtccacatcctctgctcggtgttcctcgtcgtgttcgtcggcacggtgtacttcatgtcgcggccaaggccggtgtacctcgtcgactactcctgctacaagccgccgcccagctgccgggtgccgttcgccacgttcatggagcacacgcgcctcatcaccgacgacgagaagagcgtgcggttccagaccaggatcctcgagcggtcggggctcggggaggagacctgcctcccgccggccaaccactacatcccgcctaacccgtccatggaggcgtcgcgcgccgaggcccagctcgtaatcttctccgccatcgacgacctcgtccgccgcaccggactcaagcccaaggacatcgacatcctcgtcgtcaactgcagtctcttctccccgacaccgtcgctctccgccatgatcatcaacaagtacaagctccgcagcaacatccgcagcttcaacctgtccggcatgggctgcagcgccggcctcatctccctcgacctcgcccgcgacatgctccaggtaagtactagccagctctttgatgttactactgtttagctaactaactaatcaggtgagccattaacgagcgacatggacggacacgcgcaggtgcatcccaactcgaacgcgctggtggtgtcgacggagatcatcacaccaaacttctactggggaacccggcgggacatgatgctgcccaactgcctgttccggatgggcgcggcggcgatcctgctgtcgaacaggaggagggaggcgaggagggccaagtacaggctgatgcacgtggtccgcacgcacaagggcgccgacgaccgcgcgtaccggtgcgtgtacgaggaggaggacgagcaggggcactcggggatctcgctgtccaaggagctgatggccatcgccggcgacgcgctcaagtcgaacatcaccaccatcggcccgctggtgctgcccatgtcggagcagctgctcttcttcttccgcctcgtcggccgcaagctcatcaacaagaagtggaagccgtacatcccggacttcaagctggcgttcgagcacttctgcatccacgccgggggacgcgccgtgatcgacgagctgcagaagaacctggacctgtccgcgcagcacgtggaggcgtcccgcatgacgctgcaccggttcggcaacacgtcgagcagctcgctctggtacgagctcgcctacatcgaggccaaggggcgcatgcgccgcggcgaccgcgtctggcagatcggcttcggcagcggattcaagtgcaacagcgccgtctggaagtgcctccgcacagtcaagacgcccgccgacgggccgtgggacgactgcatccaccgctaccccgtcgacatcccggaggtcgtcaagctgtgatcgaatccatggtagcctcagcctcgccctcgccggcggccgtcgcgccgccgccgcattacctcccctacacctgtacgtcacccgcgaagcgtgcgtcctcaaactttggagcttcttaatttgtggtgttttcttctttcctcctttcccctccctcgcttcttaattttttttcttgtcttccttttatttttatttttttcgctataaacacggattaaatcgatatactttgtctgatgtgtcacataaggaatgatcattcacaggagattaattattatatatttttttaattttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0220100, RefSeq:Os03g0220100