Os11g0648000

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OsNHX3(Os11g0648000), is a Na+‡and H+‡exchanger in rice (Oryza sativa)[1].

Annotated Information

Function

Figure 1. Genomic organization of the OsNHX3 genes.(from reference [1]).
  • OsNHX3 can suppress the Na+, Li+, and hygromycin sensitivity of yeast nhx1 mutants and their sensitivity to a high K+ concentration. The expression of OsNHX1, OsNHX2, OsNHX3, and OsNHX5 is regulated differently in rice tissues and is increased by salt stress, hyperosmotic stress, and ABA[1].
  • The genomic organization of OsNHX3 is graphically presented in Figure 1. OsNHX3 had 15 exons[1].

GO assignment(s): GO:0006814, GO:0006885, GO:0015299, GO:0015385, GO:0016021

Expression

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Evolution

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Knowledge Extension

Labs working on this gene

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References

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Structured Information

Gene Name

Os11g0648000

Description

Similar to Na+/H+ antiporter

Version

NM_001074903.1 GI:115486454 GeneID:4351027

Length

4072 bp

Definition

Oryza sativa Japonica Group Os11g0648000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27611114..27615185

Sequence Coding Region

27611400..27611741,27611875..27611958,27612174..27612236,27612323..27612461,27612565..27612672
,27612803..27612903,27613014..27613080,27613181..27613227,27613303..27613544
,27613637..27613696,27613775..27613872,27614376..27614494,27614613..27614780

Expression

GEO Profiles:Os11g0648000

Genome Context

<gbrowseImage1> name=NC_008404:27611114..27615185 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27611114..27615185 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctcgggttggggatggggatggggctgggcgacccgcctgcggactacggctcgatcgcggcggtggggatgttcgtggcgctcatctgcgtctgcatcgtcgtcggccacctcctcgaggagagccgatggatgaacgagtccatcaccgcgctaatcatcgggttgggtactggaggagtgattttgatggtgtcgagctggaagcactcgcgcatactggtgttcagcgaggatctcttcttcatttacctgctcccgccgatcatattcaatgcggggttccaagttaagaagaaacaatttttccgcaacttcatgactattacgttgtttggtgcgattgggaccctaatctctttcagtgtaatttccctcggttctctaggactaatatcaaggctgaacataggttcccttgatcttggagattatcttgcacttggggcaatattctcggcaacagactctgtatgcaccttgcaggttttgaaccaagatgaaacacccttcttgtacagcctggttttcggggaaggtgttgtcaatgatgcaacatcagttgtgctattcaacgcaatgcagaactttgatcttgcaaatttcagcagtgttaaattcttgcaattcattggcaattttctttatctgtttgccacgagcacctttcttggagttgctgctggacttctcagtgcttatatcataaaaaagctgtacttcggcaggcattccactgatcgtgaagtttctattatgatgctcatggcttacttgtcttacatgcttgctgaattgcttgatttgagtggtattcttacggtgttcttctgtggtattgtaatgtcgcactatacctggcataatgtaacagagagttccagggtcacaaccaagcacgccttcgccacattgtcatttatcgccgagacatttctatttctttatgttggtatggatgcattggatatggagaagtggaagattgtcggtgaaacattcagcccaatgaaatctattgctttgagctccactattttgttcttggtgctggtcgcaagagctgcttttgttttcccactatcttttttggcaaatttgaccaaaaaaactgaagagggaaagatctctattaagcagcaagttattatttggtgggcgggtctgatgagaggtgctgtgtccattgcattggcctacaacaagttcacaaggtcaggccacactcaactccctagtaatgctatcatgatcactagtacaatcactgttgttcttttcagcacgatggtctttgggctcctgactaagccattaatcagactcctaattccagcaagacacctcaaccgggaatcgagtgcgctttcggatccacctagcccgaaatccttccttgatccactgatcctgaacggttccgatgtcgatcctgagattggtgtgggcattcgccgaccgacaagcctccgacttctcctagcaagcccgacacagtcggtccaccattactggcgcaagttcgacaacgccttcatgaggccggtgtttgggggccgaggattcgtccccttcgtccccggctcaccaactgaaaggagtgtgccattactccagggaaatgagaactag</cdnaseq>

Protein Sequence

<aaseq>MELGLGMGMGLGDPPADYGSIAAVGMFVALICVCIVVGHLLEES RWMNESITALIIGLGTGGVILMVSSWKHSRILVFSEDLFFIYLLPPIIFNAGFQVKKK QFFRNFMTITLFGAIGTLISFSVISLGSLGLISRLNIGSLDLGDYLALGAIFSATDSV CTLQVLNQDETPFLYSLVFGEGVVNDATSVVLFNAMQNFDLANFSSVKFLQFIGNFLY LFATSTFLGVAAGLLSAYIIKKLYFGRHSTDREVSIMMLMAYLSYMLAELLDLSGILT VFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAETFLFLYVGMDALDMEKWKIVGE TFSPMKSIALSSTILFLVLVARAAFVFPLSFLANLTKKTEEGKISIKQQVIIWWAGLM RGAVSIALAYNKFTRSGHTQLPSNAIMITSTITVVLFSTMVFGLLTKPLIRLLIPARH LNRESSALSDPPSPKSFLDPLILNGSDVDPEIGVGIRRPTSLRLLLASPTQSVHHYWR KFDNAFMRPVFGGRGFVPFVPGSPTERSVPLLQGNEN</aaseq>

Gene Sequence

<dnaseqindica>3445..3786#3228..3311#2950..3012#2725..2863#2514..2621#2283..2383#2106..2172#1959..2005#1642..1883#1490..1549#1314..1411#692..810#406..573#atactatctcgaaacgataaaaaagagcacaaattcttctcctgttagtaattctgttcgaattcctctccttccccaaaaaagagtggagttcatctccgccacgcggggttaccgataaaaatcccccaaatttccgctcccaccccgtcggattctcccccgaatccgagagttcatcgttttccgccgatttattttatctggttttgtaaaccagcagcccaattgctctctgccttcgtctacctcgtggaagattccgggtcaaattctagactttttggtgggttgcgtgcgaggggtggaggttgcttcgaaggcaagcgttggggggggggggggggattggattttgaggagggagggagggagtagggtttggtaattggaggaggtggagtaatggagctcgggttggggatggggatggggctgggcgacccgcctgcggactacggctcgatcgcggcggtggggatgttcgtggcgctcatctgcgtctgcatcgtcgtcggccacctcctcgaggagagccgatggatgaacgagtccatcaccgcgctaatcatcgtgagtcgatgagttcttgttgagttgtgctgtttattatgtgagattttgggagatgatggtggttttcgtttggtgtttgattgtttgtggtgtgtgtgtctggggtttcttgcaggggttgggtactggaggagtgattttgatggtgtcgagctggaagcactcgcgcatactggtgttcagcgaggatctcttcttcatttacctgctcccgccgatcatattcaatgcggggtaagctgtttcatgtgaattaagattgtgctatcatggtgatgattttctttataattagagtcgtctttgcaaaagtagtgagtgataaggaagaaaatatgcaggggcaattagttgtgagttccatgctggaacgtgatataattgggttgttactaaatggagctgctattgcttctctctttgaaattatcatgctaattaaggcaatatcacttatgagatgtatgcgtttttgtagtacacgtaaattgtgcctcttcagttctgtagtaggagtatttggaatgggaaattttacttttccacttctttgtatcaaactgattttgctaattaaggtacacctagctatcaaatgcatacacatagtgcacattattatagcaattaaactctctaatcttccagtaggaaattctgttacatcatttaaagtttaacattagtcagcaaggtgaagcttactgttcctttttttctctttctttcctgagcaggttccaagttaagaagaaacaatttttccgcaacttcatgactattacgttgtttggtgcgattgggaccctaatctctttcagtgtaatttccctcggtaagttgttttcctctttaaattttacctggcatgttcttttgtgctcatctctctcactcgtacattccatcacaggttctctaggactaatatcaaggctgaacataggttcccttgatcttggagattatcttggtcagttcttatatgaacctaatgcgtaagcatttcgattgcatgcctgtggttctgtgttttgacttgttccgcatgtgaacttttttcagcacttggggcaatattctcggcaacagactctgtatgcaccttgcaggttttgaaccaagatgaaacacccttcttgtacagcctggttttcggggaaggtgttgtcaatgatgcaacatcagttgtgctattcaacgcaatgcagaactttgatcttgcaaatttcagcagtgttaaattcttgcaattcattggcaattttctttatctgtttgccacgagcacctttcttggagttgctgtaagttctttcctgctcactccaatctttatctttgtcaatgtttctttttcctaaagcatgatatgactgcaggctggacttctcagtgcttatatcataaaaaagctgtacttcggcaggtttgtacaacacaccacattatgtggttgatatttgtatgatcaatcaccagacattttataataattctctaatccatgaattataccttcaatccaggcattccactgatcgtgaagtttctattatgatgctcatggcttacttgtcttacatgcttgctgaagtaagcaccctgtactattagcatcatatagatcctgcagatttgagcaatgtcagctaaatttaattgtaatggataatctgatattaacctgtttctttttgtggcagttgcttgatttgagtggtattcttacggtgttcttctgtggtattgtaatgtcgcactatacctggcataatgtaacagagagttccagggtcacaaccaagtaagtatctttatggtttgtttcagcaaacttattattccattttcatttttttaacttgatgatttcaaatatgtatttcctgaaattgtgtatcacactgatgcttctctaattgtatactctataggcacgccttcgccacattgtcatttatcgccgagacatttctatttctttatgttggtatggatgcattggatatggagaagtggaagattgtcggtgaaacattcaggtatgctctctgtgggtgtgggaagtaaccatatatgttgttcagttgcccaattaatagataataattgtaatatgtgtaacatatttcttatcctgtgcagcccaatgaaatctattgctttgagctccactattttgttcttggtgctggtcgcaagagctgcttttgttttcccactatcttttttggcaaatttgaccaaaaaaactgaagagggaaagatctctattaagcagcaagtgagtgttttatttagcagcatcttaggcttgctatcttctcttataaggggactttcaggttacttatgatgtgggttattcaggttattatttggtgggcgggtctgatgagaggtgctgtgtccattgcattggcctacaacaaggtaacatttgatctgttcgacctgtgctttagcttgtacaagtttgtgtgatcttgaaatttcatatttgactggctgcttgataaagacacgtgcagcttgcctgtttataaactaacttgtttgaggctggattttttttgtttgctttcgtgtattaactattgttcgtaattcatgctttgatctgaaacttgtcacttcgacacttgcagttcacaaggtcaggccacactcaactccctagtaatgctatcatgatcactagtacaatcactgttgttcttttcagcacgatggtaagttctctctcaaacaaacacaaccctgtgcaatacatccttcggttcaaagggagacagtatgaaagctgatccctgaacaattccacaagttggttctgataaaatcatctctcttatgttccctcaggtctttgggctcctgactaagccattaatcagactcctaattccagcaagacacctcaaccgggaatcgagtgcgctttcggatccacctagcccgaaatccttccttgatccactgatcctgaacggttccgatgtcgatcctgagattggtgtgggcattcgccgaccgacaagcctccgacttctcctagcaagcccgacacagtcggtccaccattactggcgcaagttcgacaacgccttcatgaggccggtgtttgggggccgaggattcgtccccttcgtccccggctcaccaactgaaaggagtgtgccattactccagggaaatgagaactagaaaactttttcaaaggagcgtgccattactccagggaaatgagagctagaaaacataaacaaaggttgtgtaaatctgaggtagaagaacaatcagcaaacacagtttctgtaaatttatctgaggtagtaacagcgttcttggtagctgtggtacatgctgatgtgttatgtacctaatattgtagatagcatggatgtatatatataaagcctctgtagtttagcaagaaatggtgctgaaaattttgccacgatttatacaatatggtatgatttttgcattc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0648000, RefSeq:Os11g0648000

  1. ↑ 1.0 1.1 1.2 1.3 Cite error: Invalid <ref> tag; no text was provided for refs named ref1
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