Os10g0174548

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Revision as of 08:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0174548| Description = EGF-like, type 3 domain containing protein| Version = NM_001189116.1 GI:297727362 GeneID:9271894| Length = 3147 bp| ...")
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Gene Name

Os10g0174548

Description

EGF-like, type 3 domain containing protein

Version

NM_001189116.1 GI:297727362 GeneID:9271894

Length

3147 bp

Definition

Oryza sativa Japonica Group Os10g0174548, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:4838406..4841552

Sequence Coding Region

4838406..4838435,4838464..4838541,4838947..4839488,4840025..4840192,4841102..4841552

Expression

GEO Profiles:Os10g0174548

Genome Context

<gbrowseImage1> name=NC_008403:4838406..4841552 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:4838406..4841552 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaggaagaggaggagaaggagaagcgggaaaggaaatgtaccgccttcctcaccaccgacggccatactggctgctgtctttgttgacagcgaccaaaccgtcgacctcgtccacccctccctcggagtccgcaaactgcacgctgttgtcgccgaccgggtgagccttgtaccacagcagatcttggcctcgctcgcgcgcccccgccgcgcgcgccgcgtcccccacaacgaggggactgacctcaccgccaccatcgcgcgcgagggcttcgacagctacgtcctcgccgtcctccgccgctcccaccgcgagtgccgcggtggccgctcccgccccgggaagaaggcggtggctgcgacagcgggggaccgagcccggcatcctgaagcgcctccccccgatggatctggcctccctggcctcgaccccctcgcaggcggcgatatagatgagtgcgctcttccgggtattatgagcaattgctcctttaatagcgtatgcgtaaacagaccaggaggctttgattgtccatgcaaacgaggaatgacgggcgacggcaaaagaggaacatgcaccgagaatttcccaccagcagcaaaagccgctgtcggcctttcttccttcattgttttcatcgtcctaatttttatggtgaaacaacacctaaaacttaagaagttctacgaacaaaatggtggtccggtattgaaaggtgtgagaaatataaagatctacacaaagaaagaactgaaacaaataacgagtaactatagcagcgacattggagaaggagcctctggtaaagtttatatggggactcttaagggcggacaacaagtggctataaagaagtccaaaaaagttgatgaagaaagaaaaagtgaattcactcaagaggtcatactccaatctgaaatgaagcacaagaatataatccagctctttggttgttgccttgaagttgatgttcctatgttagtgtatgagtttaccgtgaaaggaagtttacatgatgtcctcttcaaatgtgatgagaatatgaaagggaatttacatgacgttctacccaaatacaatgataacaagaaagggaaagggaaagggaaagggaaagtacacgacgcactcgttgaatgtgatggtaacaaaaatgcctaccttgataaaagagaaagggaaaaatgccataaagagattacaccagatgtggaaattaatattcttgaaatgaacctgtccaggataaacgccctgatatga</cdnaseq>

Protein Sequence

<aaseq>MKRKRRRRRSGKGNVPPSSPPTAILAAVFVDSDQTVDLVHPSLG VRKLHAVVADRVSLVPQQILASLARPRRARRVPHNEGTDLTATIAREGFDSYVLAVLR RSHRECRGGRSRPGKKAVAATAGDRARHPEAPPPDGSGLPGLDPLAGGDIDECALPGI MSNCSFNSVCVNRPGGFDCPCKRGMTGDGKRGTCTENFPPAAKAAVGLSSFIVFIVLI FMVKQHLKLKKFYEQNGGPVLKGVRNIKIYTKKELKQITSNYSSDIGEGASGKVYMGT LKGGQQVAIKKSKKVDEERKSEFTQEVILQSEMKHKNIIQLFGCCLEVDVPMLVYEFT VKGSLHDVLFKCDENMKGNLHDVLPKYNDNKKGKGKGKGKVHDALVECDGNKNAYLDK REREKCHKEITPDVEINILEMNLSRINALI</aaseq>

Gene Sequence

<dnaseqindica>3118..3147#3012..3089#2065..2606#1361..1528#1..451#atgaagaggaagaggaggagaaggagaagcgggaaaggaaatgtaccgccttcctcaccaccgacggccatactggctgctgtctttgttgacagcgaccaaaccgtcgacctcgtccacccctccctcggagtccgcaaactgcacgctgttgtcgccgaccgggtgagccttgtaccacagcagatcttggcctcgctcgcgcgcccccgccgcgcgcgccgcgtcccccacaacgaggggactgacctcaccgccaccatcgcgcgcgagggcttcgacagctacgtcctcgccgtcctccgccgctcccaccgcgagtgccgcggtggccgctcccgccccgggaagaaggcggtggctgcgacagcgggggaccgagcccggcatcctgaagcgcctccccccgatggatctggcctccctggcctcgaccccctcgcaggcggcggtgcgagctagataagtgaacgtgagtggacacgagggatggataaggttgaggcgtgacgaggagataaggctgaggatgcgaggtggcaacgtgcgctgtgcggctcggctccggccagtttttttataggtgccttttttcgaaggaaccgacaactatggctactattataaaaattaaaattaaagatgtttttctgatactttgttatgtcattcttatttgagtcggtttttaagtttattcaatttcggaaatacagatgcatgtttgagtcaatttttaagttcgttcgttttacgaaatacataaggagttgtataagaaatctctttaaaaatactcgcatgctaatttgagttgatcggactcctaattgcagctcttgattttgtaaacaaaaatatacaagcgaattccagcaatcaatttcacctaagctaaactgtagcacagtaataacattaaaatagccttcacccgttgcaatgcacgaatatttttttctagtatataaaaaaaccaacatctataatattagtaccttttttcactagaaccgacacttataatgtaagtataggtgctggttcttttaaaaaatcagtacctctactatttgtacctatagttcttaaagatgccggttcttatttttttcatcgtgcggaggtagaaatatgccgataggtgtcggttttaaatgaaccggcacctataagactggtgcctacgagggttttgtagtagtggtatcgaatggggtagtgacaatagcctagcctacattaaacaatatattcgaaaaccaaagaacttattatccggttaatattccttttaaaaatataaattatcctatggataactcagtgtatattaacacgtataattcttactttgcagatatagatgagtgcgctcttccgggtattatgagcaattgctcctttaatagcgtatgcgtaaacagaccaggaggctttgattgtccatgcaaacgaggaatgacgggcgacggcaaaagaggaacatgcaccgagaatttcccaccagcagcaaaagccgctgtcggtaagctagtcggcacgcatttaaatttggatttaactaataataagtcatcaacttgttctttcataggctagagtgttgcataatatttgtttgctctaataattcacaaaaaaagttgataccaaattcggaagatgattgttgtcagtctttttctacatttcaatcttgaatttcataagttaaaatgttccccaagacctagtcatcttaaaacaagctaccggtgtttcaggaatatacaagtgtcaactccttctgcaaacatgttggaatttctcctcataatatcatttatgtcctttgttatgaaatttaaaatcttacagagaaacataatatataagtcataattttatcctcatgtggattctgaaaaaaagttcaatctagctagagatattcattttgcttttatcttgcatatatagtattattgacgacttgactggtatgttaattaaggattgctgaactgtcaaataaaattgtttaattactaatgctgacctattttccaatctcacgtgcaggcctttcttccttcattgttttcatcgtcctaatttttatggtgaaacaacacctaaaacttaagaagttctacgaacaaaatggtggtccggtattgaaaggtgtgagaaatataaagatctacacaaagaaagaactgaaacaaataacgagtaactatagcagcgacattggagaaggagcctctggtaaagtttatatggggactcttaagggcggacaacaagtggctataaagaagtccaaaaaagttgatgaagaaagaaaaagtgaattcactcaagaggtcatactccaatctgaaatgaagcacaagaatataatccagctctttggttgttgccttgaagttgatgttcctatgttagtgtatgagtttaccgtgaaaggaagtttacatgatgtcctcttcaaatgtgatgagaatatgaaagggaatttacatgacgttctacccaaatacaatgataacaagaaagggaaagggaaagggaaagggaaagtacacgacgcactcgttgaatgtgatggtaacaaaaatgtgagtttgcatgatgtcctcttcaaatgcggggataaaattgcaatagatacacttctggagatcgctattggatcagctgaaggactaacttatatgcatacagcacgggagactcccatccgtcatggtgatctcaaatctggtaatatacttatagacaataatttcgtccctaaaatttcagactttggaacatcaagatcactggttgcaggtcataaatttaggcctgataaattcattcctgcggacatgaattatatagatccagtatatatggaagatggaatgctcacggagaaaagtgacatctatagctttggaattgttcttattgaacttgttacaaggaagcccgcaaaatatgatgacgacaggagctatgttcgaaacttcattcaggcctaccttgataaaagagaaagggaaaaatgccataaagagattacaccagatgtggaaattaatattcttgaaatggttagtgaagttgctgtggcatgtttagaacctgtccaggataaacgccctgatatga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0174548, RefSeq:Os10g0174548