Os03g0221700

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0221700| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001055949.1 GI:115451626 GeneID:433209...")
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Gene Name

Os03g0221700

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001055949.1 GI:115451626 GeneID:4332099

Length

2830 bp

Definition

Oryza sativa Japonica Group Os03g0221700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6404750..6407579

Sequence Coding Region

6404794..6407325

Expression

GEO Profiles:Os03g0221700

Genome Context

<gbrowseImage1> name=NC_008396:6404750..6407579 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6404750..6407579 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcctcgtcggcgtcctcctgctgctcttcttcaacctacatctccccacggccgccattgacaccctcacgctaggccagtctctgctgtggaaccagacgctggtctccaatggcggcaacttcgagctcggcctcttctcgccgggaaagtccaacaagcactaccttggcatctggtacaagaagatctccaagaagacggttgtttgggttgccaaccgtgagcgcccgattcttgagccgtcgagctgccacctcgagctgagcgtccacggcgatctgcggctgttctcgacggcgccgtcgaacaccttgctgtggtcgtcgaacgcgtccgcgtcttcctcgccgtcgcccccgcgcaccaccgtcgccacgctccaggacgacggcaacctcgtggtgaacagcaacgcgacgcggtcgcggtcgcgatcgccgtcgtcgactacgacgacgcacgtggcgtggcagagctttgatcacccgaccgacacatggctccccggagccaggctcggctacgacaggggccgcggcgtccacagcttcctcacgtcgtggacggactccgagaacccggcgcccggcgcgttctccatggtgatcgacgcgcgcgggctggccaagttcgacctcctcgccggcggcgagcaccggtactggacgaccggcctctgggacggcgagatcttcgcgaacgtgccggagatgcggtccggctacttcaccggcgtcccctacgcgccgaacgccagcgtcaacttcttcagctaccgcgaccggctgccgggcgccgtcggcaacttcatgctggacgtgaacgggcagatgcggcggcggcagtggagcgagacggcggggaagtggatcctcttctgctcgttgccccacgacgcgtgcgacgtgtacggctcgtgcgggccctttggagtctgcagcaacgccaccaacccggagtgccggtgccccgccggcttcgagccgcggtcgtcggaggagtggaggctggagaacgccgccggaggctgcgtgaggcggcaccctctcgagtgtcacggagacgggttcctggcgctgccgtacaccgtgcggctcccgaatggctccgtggaggcgccggccggagctgggaacgacaaggcgtgcgcgcacacctgcctggtcgactgctcctgcacggcctacgttcacgacggagcgaagtgcctcgtgtggaacggcgagctcgtcaacatgaaagcctacgcggctaatgagaatggccaaggcgatcctggcctcgccggagcggtgcttcacctccgtgtcgcccactcggaggttccggcgtcgtcgacggagcactcgtggaagaaatcgatggtaatccttggaagcgtcgttgcggcggtggtgctgctcttggcgagcctcgtcaccgtggtggcggtggcggcggtgttgcggatgcggcgtaggaggggcaaggtgacggcggtgcaggggtcgctgctgctgctcgactaccatgccgtgaagaccgcgacgagggacttctcggagaagctcgggagcgggagcttcggcacggtgttcaaaggcgcgctgccggacgggacgcccgtggccgtcaagaagctcgacggtctccggcaaggcgagaagcaattcagaacggaggtggtgacgctcggcatgatccagcacgtcaacctcgtccgactccgtggcttctgctgcgagggaaacaagagggcgctcgtgtacgactacatggccaatggctcgctggactcgcacctgttcgtcatgagcggctccagctccggccccgactccaagcaggtgaccctgacttggagccaacggtacaacgtcgcggttggtgtggcacggggcttggcttacctgcacgagaagtgcagggagtgcatcatacactgcgacgtcaagccggagaacatcctcctcgatcaggagatggcggcgaggctcgcggacttcggcatggccaagctcgtcggccgcgacttcagcagcgtcctgaccaccatgcggggcacggtgggatacctcgcgccggagtggctagccggcacgccggtcaccgcaaaagccgacgtgtacagcttcgggctcctgctcttcgagctcgtctcgggccggcggaacagcaccgcgccgtcgtcgtcgtcggagggcggccctgggatttacttcccggttcatgccgtggtcaagctaaacgaaggcgacgtggccgggctggtcgacgagagggtggccaaggatgccgacccgaaggaggttgagagactctgcaaggtcgcgggctggtgcattcaagacgaggaaggcgaccggccgaccatggggctcgtcgtgcagcagctcgaaggcatcgccaacgtaatgttgccgccgatcccttctcggcttcatatcctggcgattgagaacgaatgggtcagaggtgttccagaggatgagcgctgctcaaagagcggtagtaaaccagaaacagaagcaatagaagaaatgtag</cdnaseq>

Protein Sequence

<aaseq>MLLVGVLLLLFFNLHLPTAAIDTLTLGQSLLWNQTLVSNGGNFE LGLFSPGKSNKHYLGIWYKKISKKTVVWVANRERPILEPSSCHLELSVHGDLRLFSTA PSNTLLWSSNASASSSPSPPRTTVATLQDDGNLVVNSNATRSRSRSPSSTTTTHVAWQ SFDHPTDTWLPGARLGYDRGRGVHSFLTSWTDSENPAPGAFSMVIDARGLAKFDLLAG GEHRYWTTGLWDGEIFANVPEMRSGYFTGVPYAPNASVNFFSYRDRLPGAVGNFMLDV NGQMRRRQWSETAGKWILFCSLPHDACDVYGSCGPFGVCSNATNPECRCPAGFEPRSS EEWRLENAAGGCVRRHPLECHGDGFLALPYTVRLPNGSVEAPAGAGNDKACAHTCLVD CSCTAYVHDGAKCLVWNGELVNMKAYAANENGQGDPGLAGAVLHLRVAHSEVPASSTE HSWKKSMVILGSVVAAVVLLLASLVTVVAVAAVLRMRRRRGKVTAVQGSLLLLDYHAV KTATRDFSEKLGSGSFGTVFKGALPDGTPVAVKKLDGLRQGEKQFRTEVVTLGMIQHV NLVRLRGFCCEGNKRALVYDYMANGSLDSHLFVMSGSSSGPDSKQVTLTWSQRYNVAV GVARGLAYLHEKCRECIIHCDVKPENILLDQEMAARLADFGMAKLVGRDFSSVLTTMR GTVGYLAPEWLAGTPVTAKADVYSFGLLLFELVSGRRNSTAPSSSSEGGPGIYFPVHA VVKLNEGDVAGLVDERVAKDADPKEVERLCKVAGWCIQDEEGDRPTMGLVVQQLEGIA NVMLPPIPSRLHILAIENEWVRGVPEDERCSKSGSKPETEAIEEM</aaseq>

Gene Sequence

<dnaseqindica>45..2576#gctaagtaagtaagaattgtggttgccactcggcactcgccaccatgctcctcgtcggcgtcctcctgctgctcttcttcaacctacatctccccacggccgccattgacaccctcacgctaggccagtctctgctgtggaaccagacgctggtctccaatggcggcaacttcgagctcggcctcttctcgccgggaaagtccaacaagcactaccttggcatctggtacaagaagatctccaagaagacggttgtttgggttgccaaccgtgagcgcccgattcttgagccgtcgagctgccacctcgagctgagcgtccacggcgatctgcggctgttctcgacggcgccgtcgaacaccttgctgtggtcgtcgaacgcgtccgcgtcttcctcgccgtcgcccccgcgcaccaccgtcgccacgctccaggacgacggcaacctcgtggtgaacagcaacgcgacgcggtcgcggtcgcgatcgccgtcgtcgactacgacgacgcacgtggcgtggcagagctttgatcacccgaccgacacatggctccccggagccaggctcggctacgacaggggccgcggcgtccacagcttcctcacgtcgtggacggactccgagaacccggcgcccggcgcgttctccatggtgatcgacgcgcgcgggctggccaagttcgacctcctcgccggcggcgagcaccggtactggacgaccggcctctgggacggcgagatcttcgcgaacgtgccggagatgcggtccggctacttcaccggcgtcccctacgcgccgaacgccagcgtcaacttcttcagctaccgcgaccggctgccgggcgccgtcggcaacttcatgctggacgtgaacgggcagatgcggcggcggcagtggagcgagacggcggggaagtggatcctcttctgctcgttgccccacgacgcgtgcgacgtgtacggctcgtgcgggccctttggagtctgcagcaacgccaccaacccggagtgccggtgccccgccggcttcgagccgcggtcgtcggaggagtggaggctggagaacgccgccggaggctgcgtgaggcggcaccctctcgagtgtcacggagacgggttcctggcgctgccgtacaccgtgcggctcccgaatggctccgtggaggcgccggccggagctgggaacgacaaggcgtgcgcgcacacctgcctggtcgactgctcctgcacggcctacgttcacgacggagcgaagtgcctcgtgtggaacggcgagctcgtcaacatgaaagcctacgcggctaatgagaatggccaaggcgatcctggcctcgccggagcggtgcttcacctccgtgtcgcccactcggaggttccggcgtcgtcgacggagcactcgtggaagaaatcgatggtaatccttggaagcgtcgttgcggcggtggtgctgctcttggcgagcctcgtcaccgtggtggcggtggcggcggtgttgcggatgcggcgtaggaggggcaaggtgacggcggtgcaggggtcgctgctgctgctcgactaccatgccgtgaagaccgcgacgagggacttctcggagaagctcgggagcgggagcttcggcacggtgttcaaaggcgcgctgccggacgggacgcccgtggccgtcaagaagctcgacggtctccggcaaggcgagaagcaattcagaacggaggtggtgacgctcggcatgatccagcacgtcaacctcgtccgactccgtggcttctgctgcgagggaaacaagagggcgctcgtgtacgactacatggccaatggctcgctggactcgcacctgttcgtcatgagcggctccagctccggccccgactccaagcaggtgaccctgacttggagccaacggtacaacgtcgcggttggtgtggcacggggcttggcttacctgcacgagaagtgcagggagtgcatcatacactgcgacgtcaagccggagaacatcctcctcgatcaggagatggcggcgaggctcgcggacttcggcatggccaagctcgtcggccgcgacttcagcagcgtcctgaccaccatgcggggcacggtgggatacctcgcgccggagtggctagccggcacgccggtcaccgcaaaagccgacgtgtacagcttcgggctcctgctcttcgagctcgtctcgggccggcggaacagcaccgcgccgtcgtcgtcgtcggagggcggccctgggatttacttcccggttcatgccgtggtcaagctaaacgaaggcgacgtggccgggctggtcgacgagagggtggccaaggatgccgacccgaaggaggttgagagactctgcaaggtcgcgggctggtgcattcaagacgaggaaggcgaccggccgaccatggggctcgtcgtgcagcagctcgaaggcatcgccaacgtaatgttgccgccgatcccttctcggcttcatatcctggcgattgagaacgaatgggtcagaggtgttccagaggatgagcgctgctcaaagagcggtagtaaaccagaaacagaagcaatagaagaaatgtagaactgaaaagaatctgggagcaccctacagctgaagtgaagatgcagcgtcagatatgaaaatgtagttgtaatgtcagcatagttgatatttcccgtgtggatgtatagccagtactgtactgcaactgttctgtaaattccttaaattccggaaacaggatcagacaagtaccttctctcgttttgttcccatctaattctggtccatccttgctgacagctgcacctttattgaagaaatccattagtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0221700, RefSeq:Os03g0221700