Os03g0222100

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0222100| Description = Similar to Topoisomerase-like protein| Version = NM_001055952.1 GI:115451632 GeneID:4332101| Length = 2668 bp| Defi...")
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Gene Name

Os03g0222100

Description

Similar to Topoisomerase-like protein

Version

NM_001055952.1 GI:115451632 GeneID:4332101

Length

2668 bp

Definition

Oryza sativa Japonica Group Os03g0222100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6420147..6422814

Sequence Coding Region

6420524..6422359,6422441..6422521

Expression

GEO Profiles:Os03g0222100

Genome Context

<gbrowseImage1> name=NC_008396:6420147..6422814 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6420147..6422814 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcccccatggagtcccgtcctgatgatcttgttcctcccgcgatgcacaagccggcgatccaatgcgccgccgccgaggacgcgagcctgctgcgaagcccgacggtgtcgtcggaggagttcatgcagttcaagaggaaagccacgacgatcttggaggagtacttctccacggacgacgtcgcggcgacggcgaacgagctgagggagctgcgcgtgccgtgctaccactactacttcgtcaagaagctggtctcggtggccatggaccgccacgacagggagaaggagatggcggccgtgctgctgtcctcgctgtacggcgacgtcatcgaccggccgcaggtgtacaaggggttcggcaagctcgccgagtcctgcgacgacctgtccgtcgacacgcccgacgccgtcgacatcctcgccgtgttcgtcgcccgcgccatcatcgacgacatactcccgccggcgttcctggccaagcagctgacgtgcctgccggagggatgcaagggcgccgaggttcttcacagggcggagaaaagctacctgtccgtgccgcaccacggcgagatcatcctgcagaggtggggcgggagcaagagcatcacggtggaggaggccaaggccaagatcgctgacatcctcgaggagtacctcgccgccggcgacatcggagaggcttgccggtgcatcaggggcctcaagatctctttcttccaccacgacatcgtcaagcgcgccctcaccctcgccatggagcgcggcggcggcgccgaggggcacatcctggatctcctcaagtcggcgtccgacgaaggcatcatcaacgagagccagatcaccaaagggttcaaccgcctcatcgattccgtcgacgatctgacgctcgacgtgccaaacgcgaggcgcctcctgaaatcgatgatcctgaaggcctcgtcggagggatggctctgcgcgtcgtcgctgaagccgctgggccccgagccgaagaaggccgtcgtcgaggacgacgctgcggtgcggcagttcaaggcgaagacattgtcgatcataaaggagtacttcttgacaggggacatcatcgaggtgatgagcagcctggaggccgagaactacgcgtgttcctcctcctacaacgccatcttcgtcaagaagctgatcacctccgcgatggaccggaagagccgcgagaaggagatggcgtccgtgctgctgtcctcgctcggaatgccgccggaggacgtcgtgtcggggttccacctcctgatcgagtccgccgaggacgccgcgctggacaaccccgccatcgtcgaggacctgaccatgttcttcgccaggtcagtggtcgacgaggtgatcgcgccatcgaacctagagaaaatggaggaggaggccggccgcggcaagccagggggatcctccaccggcttattggcgctccggaacgcccgtgccctgctcggcgcgaagctctctgcggagcggatactgcgttgctggggcggcggcgccaccggcaaggccgggtgggagctggacgacgtgaaggacaagatcggcaggctgctgcaggagtacgactgcggcggcgacatccgggaggcgtgccagtgcatcaaggagctcgggatgccattcttccaccacgaggtggtgaagaaggcgctggtggcgatcatggagaagcgtggcaaggacgagcggctgtggggcctcctcgccgagtgctacggccgcggcctcatcacgccgaaccagatgaccaagggcttcgagcgggtggccggctgcgtcgacgacctcgcgctcgacgtgccggacgccggcaagcagttatgctgctacgtcgagcgcgccaagaagggtggatggctggacgcgtccttccccaacggtgtgcgctcgtga</cdnaseq>

Protein Sequence

<aaseq>MSPMESRPDDLVPPAMHKPAIQCAAAEDASLLRSPTVSSEEFMQ FKRKATTILEEYFSTDDVAATANELRELRVPCYHYYFVKKLVSVAMDRHDREKEMAAV LLSSLYGDVIDRPQVYKGFGKLAESCDDLSVDTPDAVDILAVFVARAIIDDILPPAFL AKQLTCLPEGCKGAEVLHRAEKSYLSVPHHGEIILQRWGGSKSITVEEAKAKIADILE EYLAAGDIGEACRCIRGLKISFFHHDIVKRALTLAMERGGGAEGHILDLLKSASDEGI INESQITKGFNRLIDSVDDLTLDVPNARRLLKSMILKASSEGWLCASSLKPLGPEPKK AVVEDDAAVRQFKAKTLSIIKEYFLTGDIIEVMSSLEAENYACSSSYNAIFVKKLITS AMDRKSREKEMASVLLSSLGMPPEDVVSGFHLLIESAEDAALDNPAIVEDLTMFFARS VVDEVIAPSNLEKMEEEAGRGKPGGSSTGLLALRNARALLGAKLSAERILRCWGGGAT GKAGWELDDVKDKIGRLLQEYDCGGDIREACQCIKELGMPFFHHEVVKKALVAIMEKR GKDERLWGLLAECYGRGLITPNQMTKGFERVAGCVDDLALDVPDAGKQLCCYVERAKK GGWLDASFPNGVRS</aaseq>

Gene Sequence

<dnaseqindica>456..2291#294..374#acagctctctctcaatcgctccctgagctagagctgtccctgccaaaggcaaataataccagatgaacacggcagcctctcgatctcgacaactcggggcggaataattctggtgttcttctcatcaccgatcgtttctgtacatgtaacaagttgaggatcgtggcgcctgcatgcatttggtggacgccacgtcaagaataaccgaggttacaggtgtctccccctgcatgcagcagggggcatctgcagcttgcggaactcggatggtttgagtttgaacgagttgcagcatgtcccccatggagtcccgtcctgatgatcttgttcctcccgcgatgcacaagccggcgatccaatgcgccgccgccgaggtagatccgtatttgcgttgattttgcctctgcgttttttttcttttaactatcatggcgaggtggttaatttgtcatcaggacgcgagcctgctgcgaagcccgacggtgtcgtcggaggagttcatgcagttcaagaggaaagccacgacgatcttggaggagtacttctccacggacgacgtcgcggcgacggcgaacgagctgagggagctgcgcgtgccgtgctaccactactacttcgtcaagaagctggtctcggtggccatggaccgccacgacagggagaaggagatggcggccgtgctgctgtcctcgctgtacggcgacgtcatcgaccggccgcaggtgtacaaggggttcggcaagctcgccgagtcctgcgacgacctgtccgtcgacacgcccgacgccgtcgacatcctcgccgtgttcgtcgcccgcgccatcatcgacgacatactcccgccggcgttcctggccaagcagctgacgtgcctgccggagggatgcaagggcgccgaggttcttcacagggcggagaaaagctacctgtccgtgccgcaccacggcgagatcatcctgcagaggtggggcgggagcaagagcatcacggtggaggaggccaaggccaagatcgctgacatcctcgaggagtacctcgccgccggcgacatcggagaggcttgccggtgcatcaggggcctcaagatctctttcttccaccacgacatcgtcaagcgcgccctcaccctcgccatggagcgcggcggcggcgccgaggggcacatcctggatctcctcaagtcggcgtccgacgaaggcatcatcaacgagagccagatcaccaaagggttcaaccgcctcatcgattccgtcgacgatctgacgctcgacgtgccaaacgcgaggcgcctcctgaaatcgatgatcctgaaggcctcgtcggagggatggctctgcgcgtcgtcgctgaagccgctgggccccgagccgaagaaggccgtcgtcgaggacgacgctgcggtgcggcagttcaaggcgaagacattgtcgatcataaaggagtacttcttgacaggggacatcatcgaggtgatgagcagcctggaggccgagaactacgcgtgttcctcctcctacaacgccatcttcgtcaagaagctgatcacctccgcgatggaccggaagagccgcgagaaggagatggcgtccgtgctgctgtcctcgctcggaatgccgccggaggacgtcgtgtcggggttccacctcctgatcgagtccgccgaggacgccgcgctggacaaccccgccatcgtcgaggacctgaccatgttcttcgccaggtcagtggtcgacgaggtgatcgcgccatcgaacctagagaaaatggaggaggaggccggccgcggcaagccagggggatcctccaccggcttattggcgctccggaacgcccgtgccctgctcggcgcgaagctctctgcggagcggatactgcgttgctggggcggcggcgccaccggcaaggccgggtgggagctggacgacgtgaaggacaagatcggcaggctgctgcaggagtacgactgcggcggcgacatccgggaggcgtgccagtgcatcaaggagctcgggatgccattcttccaccacgaggtggtgaagaaggcgctggtggcgatcatggagaagcgtggcaaggacgagcggctgtggggcctcctcgccgagtgctacggccgcggcctcatcacgccgaaccagatgaccaagggcttcgagcgggtggccggctgcgtcgacgacctcgcgctcgacgtgccggacgccggcaagcagttatgctgctacgtcgagcgcgccaagaagggtggatggctggacgcgtccttccccaacggtgtgcgctcgtgaagaacacccggttaatttatatacatgcagatgcagcactggcattccaggggatttcatttgcaactttacacagctatatactactttgcattccgttccatgtatgtatcagcaaagggaatatgactagcacaagaaagaaaattgttgtcataggattaggaagctttgatcttccattttagcagttgcgcggcgtttagcccggaggatttgtgcattgaagagtttgtgttgtttttaatatgatgtgagagtttctgttgtttttgttttgtgaattggctgctgagagaattaccatgctacaccttgttatcttatcacatcctatatatctataaagtttatctccactaaatgtagttaatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0222100, RefSeq:Os03g0222100