Os03g0223000

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0223000| Description = Similar to Atypical receptor-like kinase MARK| Version = NM_001055957.1 GI:115451642 GeneID:4332106| Length = 3534 b...")
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Gene Name

Os03g0223000

Description

Similar to Atypical receptor-like kinase MARK

Version

NM_001055957.1 GI:115451642 GeneID:4332106

Length

3534 bp

Definition

Oryza sativa Japonica Group Os03g0223000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6462238..6465771

Sequence Coding Region

6462254..6463775,6464860..6465479

Expression

GEO Profiles:Os03g0223000

Genome Context

<gbrowseImage1> name=NC_008396:6462238..6465771 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6462238..6465771 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cagtgctcgctctccctgagccgagagagtaaaggctctctccttcacacacctaccgcctactctcccactcttcttcccaccccactcgtgtgcgcgccactgccgccggcgatggcgccaatgccggcgccggccgtggctctggcggttctggtgctcctctccgccgttccggggtacttctccgacgacctcaacaccgacgcgcaggcgttgcaggcgctgcggtcggcggtggggaagtcggcgctgccgtcgtggaacagcagcacgccgacgtgcaattggcagggggtgacgtgcgagagcggccgcgtcaccgagctccgcctccccggcgccggcctcatgggcaccctcccgtcgaacgtgctcggcaacctctccgcgctccgcacgctctccctccgctacaacgcgctcacgggccccatccccgacgacctctcccgcctgcccgagctccgggccatctacttccagcacaacagcttctccggcgaggtcccggcgtcggtgttcaccctcaagaacctcgtgaggctggacctcgctgggaacaagttctccggcgagatctcgccggacttcaacaagctgaaccgcctcggcacgctgttcctcgacggcaacagcttcaccggcgagatccccaagctggacctgccgacattgagccagttcaacgtgtcgtacaacaagctcaacgggtccatccctaggtcgctccggaagatgcccaaggactcgttcttgggcactgggctgtgcggtggcccgctcggcctgtgccccggcgagaccgcgctcacgccggccggatctccggaggttcaacctgctggtggaggcgcggcagacgccggcggcgcaagcagcggcacgaagaagaagctctccggtggcgccatcgccggcattgccatcgggtgtgtgttcggcgtgctgctcttgctggccctgatcttcctcctctgccggaagaagtctagctcatccacgccagcgacagcggtggagaagggtcgtgacctccagatggctccgatggacatggaaccaaagggacagaacggctcagcagccggcaacggcgcccacgtcggagcagccgcggcagcgccagccgccgccacctccgccgccgtcgcggcggcggcagcagcagcgaagaccggcggcgcgacgggcgggtccaagaagctcatcttcttcggccccatggcggcggccccgccgttcgacctggaggacctgctccgcgcgtcggcggaggtgctgggcaagggcgcgttcgggacggcgtacaaggcggtgatggagagcggctccgccgtggccgtgaagcgcctcaaggacgtggaccttccggagccggagttccgggagcgcatcgccgccatcggcgccgtgcagcacgagcttgtcgtcccactccgcgcctactacttcagcaaggacgagaagctcctcgtctacgactacatgtccatgggcagcctctccgccctcctccacgggaaccgtgcttccggcaggacgccgctggactgggagacgaggtcggcgatcgcgctggcggcggcgcgcggcgtggcgcacatccactcgacggggccgacggcgtcgcacggcaacatcaagtcgtccaacgtgctgctcaccaagaactacgaggcgcgggtgtcggaccacggcctccccacgctggtcggcccgtcattctcgccgacgagggtgtccggctaccgtgccccggaggtgaccgacattcgccgggtctcgcagaaggccgacgtgtacagcttcggcgtgctgctcctcgagctgctcaccggcaaggcgccgacgcacgccgtcgtcaacgaggagggactcgacctgccgcgctgggtgcagtccgtcgtccgggaggagtggaccgccgaggtgttcgaccaggagctcctcaggtaccagaacgtcgaggaggagatggtgcagctcctccagctcgccatcgactgctcggcgcagcaccccgacaggcggccgtccatgtccgaggtggccgcgaggatcgacgagatccgccgctccagcctcggcgaccgtccggccaccgacagcgccggcgagggcgaggagccttcactataa</cdnaseq>

Protein Sequence

<aaseq>QCSLSLSRESKGSLLHTPTAYSPTLLPTPLVCAPLPPAMAPMPA PAVALAVLVLLSAVPGYFSDDLNTDAQALQALRSAVGKSALPSWNSSTPTCNWQGVTC ESGRVTELRLPGAGLMGTLPSNVLGNLSALRTLSLRYNALTGPIPDDLSRLPELRAIY FQHNSFSGEVPASVFTLKNLVRLDLAGNKFSGEISPDFNKLNRLGTLFLDGNSFTGEI PKLDLPTLSQFNVSYNKLNGSIPRSLRKMPKDSFLGTGLCGGPLGLCPGETALTPAGS PEVQPAGGGAADAGGASSGTKKKLSGGAIAGIAIGCVFGVLLLLALIFLLCRKKSSSS TPATAVEKGRDLQMAPMDMEPKGQNGSAAGNGAHVGAAAAAPAAATSAAVAAAAAAAK TGGATGGSKKLIFFGPMAAAPPFDLEDLLRASAEVLGKGAFGTAYKAVMESGSAVAVK RLKDVDLPEPEFRERIAAIGAVQHELVVPLRAYYFSKDEKLLVYDYMSMGSLSALLHG NRASGRTPLDWETRSAIALAAARGVAHIHSTGPTASHGNIKSSNVLLTKNYEARVSDH GLPTLVGPSFSPTRVSGYRAPEVTDIRRVSQKADVYSFGVLLLELLTGKAPTHAVVNE EGLDLPRWVQSVVREEWTAEVFDQELLRYQNVEEEMVQLLQLAIDCSAQHPDRRPSMS EVAARIDEIRRSSLGDRPATDSAGEGEEPSL</aaseq>

Gene Sequence

<dnaseqindica>17..1538#2623..3242#gtgtgtgcctccatgacagtgctcgctctccctgagccgagagagtaaaggctctctccttcacacacctaccgcctactctcccactcttcttcccaccccactcgtgtgcgcgccactgccgccggcgatggcgccaatgccggcgccggccgtggctctggcggttctggtgctcctctccgccgttccggggtacttctccgacgacctcaacaccgacgcgcaggcgttgcaggcgctgcggtcggcggtggggaagtcggcgctgccgtcgtggaacagcagcacgccgacgtgcaattggcagggggtgacgtgcgagagcggccgcgtcaccgagctccgcctccccggcgccggcctcatgggcaccctcccgtcgaacgtgctcggcaacctctccgcgctccgcacgctctccctccgctacaacgcgctcacgggccccatccccgacgacctctcccgcctgcccgagctccgggccatctacttccagcacaacagcttctccggcgaggtcccggcgtcggtgttcaccctcaagaacctcgtgaggctggacctcgctgggaacaagttctccggcgagatctcgccggacttcaacaagctgaaccgcctcggcacgctgttcctcgacggcaacagcttcaccggcgagatccccaagctggacctgccgacattgagccagttcaacgtgtcgtacaacaagctcaacgggtccatccctaggtcgctccggaagatgcccaaggactcgttcttgggcactgggctgtgcggtggcccgctcggcctgtgccccggcgagaccgcgctcacgccggccggatctccggaggttcaacctgctggtggaggcgcggcagacgccggcggcgcaagcagcggcacgaagaagaagctctccggtggcgccatcgccggcattgccatcgggtgtgtgttcggcgtgctgctcttgctggccctgatcttcctcctctgccggaagaagtctagctcatccacgccagcgacagcggtggagaagggtcgtgacctccagatggctccgatggacatggaaccaaagggacagaacggctcagcagccggcaacggcgcccacgtcggagcagccgcggcagcgccagccgccgccacctccgccgccgtcgcggcggcggcagcagcagcgaagaccggcggcgcgacgggcgggtccaagaagctcatcttcttcggccccatggcggcggccccgccgttcgacctggaggacctgctccgcgcgtcggcggaggtgctgggcaagggcgcgttcgggacggcgtacaaggcggtgatggagagcggctccgccgtggccgtgaagcgcctcaaggacgtggaccttccggagccggagttccgggagcgcatcgccgccatcggcgccgtgcagcacgagcttgtcgtcccactccgcgcctactacttcagcaaggacgagaagctcctcgtctacgactacatgtccatgggcagcctctccgccctcctccacggtaaaaaaaattcccccatcctttttttacgcttctgtcggcgaaccgaatccacactatcaaaccatgcgtttttttgagcgatctcgccgttacaccctggcgatattcctccggtctccagtttccaccggtggccgcagtggcgcaccgcgagagtcgtcgcctcgttgggctctcgcgtaaggtgtcgcgtccctctcgtgtgtgcatctcgttttcgtggcgtctgtctcgtcggggtcgcggctcgcgactgtggctgctccgcctcggcaccaatcaatggtggtctcacctactccgatccagtagtgatcctccggtttttcttctcatggtgtggccgtgtgtcgccgagccaagctgagctggttcgacggggcgctgccaaaagccaagtgtacttcgtcctatgggtgagccgcgattagttagtttaccagcaaacaaacactgcttcagtgtttgccagaggggtgagcgtgagatctaatcttagtttaagcccacaacgtgacagccatgactggccccccggcacgtctcggcattcgaactcgcagttgaaacaggtatagcaacttgcggctgttcatttgaaatctctgaactggtgccagtaaagtaagcagagtgccagagtttagtgtaggagggagttgtggtagattggtggtaaatttgggggcaagtggcgcatgtgagccggtgccccgggttgcagtccgggtagggtggtttgatggaccatgtgacgtttggttggcgccactgttcctcgcgattccccttttgcgcgccaataatttagcctcctcctctcctctcctctcctctcctctatctcgcgtacagatttgaagaattattcattcccggacagcgtagacagatcatagatgtacacgcgcactgttgcacacacacttgagacgtgaagctgaagctaccgcgctgtggtcgcgtgcaccgtgcagtgaacattcttaattgtccgccgtcgtgaaaacggagtaaaattcatggggaattcgctgtggatgacgcggtttttttctggtgtatctcatgggggttgcagggaaccgtgcttccggcaggacgccgctggactgggagacgaggtcggcgatcgcgctggcggcggcgcgcggcgtggcgcacatccactcgacggggccgacggcgtcgcacggcaacatcaagtcgtccaacgtgctgctcaccaagaactacgaggcgcgggtgtcggaccacggcctccccacgctggtcggcccgtcattctcgccgacgagggtgtccggctaccgtgccccggaggtgaccgacattcgccgggtctcgcagaaggccgacgtgtacagcttcggcgtgctgctcctcgagctgctcaccggcaaggcgccgacgcacgccgtcgtcaacgaggagggactcgacctgccgcgctgggtgcagtccgtcgtccgggaggagtggaccgccgaggtgttcgaccaggagctcctcaggtaccagaacgtcgaggaggagatggtgcagctcctccagctcgccatcgactgctcggcgcagcaccccgacaggcggccgtccatgtccgaggtggccgcgaggatcgacgagatccgccgctccagcctcggcgaccgtccggccaccgacagcgccggcgagggcgaggagccttcactataaccgaccagccgacattgccgtctggatcaccgtacatcgatctcagcctcagcgaacggaaattaagttggagaattgcttagttctttgcatggatcttgctcccccaggctacttttggttcatcagcaacttgtgcatgtttttttcattactttttctttcttcttcctttcttttttttcccttcttttttttgggcctttctctcacgggctttgattctattctatagcacatgtcactgtactctttgattcttggaaaggaacacttgataatgcgttgtatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0223000, RefSeq:Os03g0223000