Os03g0223200

From RiceWiki
Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0223200| Description = Alcohol dehydrogenase superfamily, zinc-containing protein| Version = NM_001186391.1 GI:297721912 GeneID:9266669| Le...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0223200

Description

Alcohol dehydrogenase superfamily, zinc-containing protein

Version

NM_001186391.1 GI:297721912 GeneID:9266669

Length

2372 bp

Definition

Oryza sativa Japonica Group Os03g0223200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6480418..6482789

Sequence Coding Region

6480418..6480500,6481482..6481595,6481690..6482221,6482294..6482447,6482497..6482789

Expression

GEO Profiles:Os03g0223200

Genome Context

<gbrowseImage1> name=NC_008396:6480418..6482789 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6480418..6482789 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagcaacctaagatggtgaccggatgggcggcaagagacgccaacgggctgctctctcctttctcttaccccctcagagctaagggagacgaagacgtcgttgtcaagatactgttctgtggcatttgccactctgatctttctactatcaagaacgagtggggcaacgccaagtatcccgtagtaccaggtcatgaaatcgttggggtcgtcgccgaggtcgggagcagcgtggcgaggttcgccgccggcgacactgtcggcgtcgggtacatcgccagcacatgccgcgcctgcgccaactgccgcgacggcttcgagaactactgcgcgggcctcgtgccgtccttcaacgccgcgctccccgacggcgctacggtgcacggcggcttctcggagctggccgtcgtcaaccagcggtacgtcgtccggatccccggcggcggcggcggcgcgtcgccggcgccgctcgaccgcttggcgccgctgctgtgcgccggcgtcacggtgtactgccccatgaggcggctcgggctggacaggccaggggtgcacctcggcgtggccgggctcggcggcctcggccatctcgctgtcaagttcggcaaggcgttcggcgtgaaggtgaccgtgatcagcaccagcccgtggaaggaagcggaggccgtggagaggcttggcgccgacgcgttcttgctcagcaccaacgccgaacagatgaaggcagctgcgggcaccatggatggcatcatcgacacggtctcggcggtgcacgacctgacgccactcatcacgctgctgcggactcacggccagctcgtcccggtcggatcgccgggaaagccggtgcaactagccctgtaccctctgcaatcaggcccatcaccagttggcccgcgaatagattgggctggaggcccaatcagagctagatgggccgtgctcatggtgtgcgatgtggcagatgggaagagcgtggccgggagcatgatcggcgggatgagggatacgcaggagatggtcgacttcgccgtcgagcacggcgtcgccgccgaggtggaggtcatcggcatggaggacgtcaacggcgcgatggagaggctgcagaagggagacgtgaggtacaggtttgtgatcgacgtagccaacacaatggcccgtgctcgttag</cdnaseq>

Protein Sequence

<aaseq>MEQQPKMVTGWAARDANGLLSPFSYPLRAKGDEDVVVKILFCGI CHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACA NCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLD RLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTVISTSP WKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLV PVGSPGKPVQLALYPLQSGPSPVGPRIDWAGGPIRARWAVLMVCDVADGKSVAGSMIG GMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTMARAR</aaseq>

Gene Sequence

<dnaseqindica>1..83#1065..1178#1273..1804#1877..2030#2080..2372#atggagcagcaacctaagatggtgaccggatgggcggcaagagacgccaacgggctgctctctcctttctcttaccccctcaggtgatctctagctctcttgctctatctttttcctgtgtgttcagatgttcctgggtcttgaaatattcaaagagaagttcacacaaaattcttgagttataccgttttctttttatgaaagcaaagttactgataaatagtcaatagtcatctccattacttcgttaattaattgtagtcaggaattctagttttgaacgggtaccatcaaactgtatcgatcgagatttatgaggaatatggaattgcctttgacaattgacgcaccaagcacataaacgctgccgtctacgttttctaccggtctccggtgatattttctttgtgtaatgaccgatgagaagtactgcatggctcattggttctgtaactctgttaattattgaaaaataactaaattgcttcagtcagtcagtagtaaccaatcgttgggttgccactctaacgaaaacatcactggtgtactgctatatagaaattagaacactgagaactaaagaggtagtattgtctgttgagttttgagcatttttcaagaaatttgcagctacacaatgcgttctgaattacattttttgattaaaaagaaacttatgcttggattgcaaagatatatcatttactgcaggaaagtaaaggctacacgggtgatgaccaattatgcactatacattcatcatgaagcctcgattgccatcttttagaaagaatgaatgatagccattcagtaggtagtagtggcgacgcactcatacccaacttccacggctgaaaggaatcaaaccattttggcaccgatggcttgtttgcacgccattgggcgagttcgagtcgttgcaacagcatttcttccattattcacctgctgatttatgtttatgcattgtcaaactatatgcattctccccaattgttttctttttcgtgagtacagaaaagggttaattaatcgtcatttccaccgtgcatttcatatttcagagctaagggagacgaagacgtcgttgtcaagatactgttctgtggcatttgccactctgatctttctactatcaagaacgagtggggcaacgccaagtatcccgtagtaccagggtcagtacgtacacatgcaatgcaaatcggctaatgcgcaacagaattatccagagatatattattgatcgatcgttttgcgtgcttaatccagtcatgaaatcgttggggtcgtcgccgaggtcgggagcagcgtggcgaggttcgccgccggcgacactgtcggcgtcgggtacatcgccagcacatgccgcgcctgcgccaactgccgcgacggcttcgagaactactgcgcgggcctcgtgccgtccttcaacgccgcgctccccgacggcgctacggtgcacggcggcttctcggagctggccgtcgtcaaccagcggtacgtcgtccggatccccggcggcggcggcggcgcgtcgccggcgccgctcgaccgcttggcgccgctgctgtgcgccggcgtcacggtgtactgccccatgaggcggctcgggctggacaggccaggggtgcacctcggcgtggccgggctcggcggcctcggccatctcgctgtcaagttcggcaaggcgttcggcgtgaaggtgaccgtgatcagcaccagcccgtggaaggaagcggaggccgtggagaggcttggcgccgacgcgttcttgctcagcaccaacgccgaacagatgaaggtgaccaaaaaacaccgatctgtgcgccattttgcatccgaattctgaagctaagaaccaccatatgtgcaggcagctgcgggcaccatggatggcatcatcgacacggtctcggcggtgcacgacctgacgccactcatcacgctgctgcggactcacggccagctcgtcccggtcggatcgccgggaaagccggtgcaactagccctgtaccctctgcaatcaggtgcgtgtggttcatcattactgggccttacagcctcacaccaaaccaggcccatcaccagttggcccgcgaatagattgggctggaggcccaatcagagctagatgggccgtgctcatggtgtgcgatgtggcagatgggaagagcgtggccgggagcatgatcggcgggatgagggatacgcaggagatggtcgacttcgccgtcgagcacggcgtcgccgccgaggtggaggtcatcggcatggaggacgtcaacggcgcgatggagaggctgcagaagggagacgtgaggtacaggtttgtgatcgacgtagccaacacaatggcccgtgctcgttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0223200, RefSeq:Os03g0223200