Os03g0225200

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0225200| Description = Cyclin-like domain containing protein| Version = NM_001055966.1 GI:115451660 GeneID:4332116| Length = 5637 bp| Defi...")
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Gene Name

Os03g0225200

Description

Cyclin-like domain containing protein

Version

NM_001055966.1 GI:115451660 GeneID:4332116

Length

5637 bp

Definition

Oryza sativa Japonica Group Os03g0225200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6583725..6589361

Sequence Coding Region

6585039..6585071,6585195..6585239,6585497..6585677,6585765..6585893,6587113..6587279
,6588343..6588513,6588618..6589301

Expression

GEO Profiles:Os03g0225200

Genome Context

<gbrowseImage1> name=NC_008396:6583725..6589361 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6583725..6589361 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcctaccatgcttgcatcggtgccgacgaggccgcgctcccatcccttccgccggcggcgaggcgcggcggcggcggctcctcctctgctccctgatcagatcgcggcggcggcggcggcggcagccaagcgacccgcggagtcgtccacctcggcctcctcctgcttccacagcgaggtcatctccgccacctccaccacctgccccacctccctcgccgcagctcagcgcccggagaagcggcctcggtaccaggatgtggacgaggagcagcccgccgcctccgagtgctccgagatcatcggtggcgcgaggccgcgcgccgccgaggtcgaggtctccgagtcgtcgtgcctcgcctccgtcctcgagtcctacctcgcctgccccgagcagctcgccaacgacgccgagacgaccgcctactcctcagcccgcgaggacctcacgctgtcggagaccgaggaggaggaggaggaggaggaggtgcgcagtggtccctgcatctgcaccgattgctcgtttagcccccttcatgagtcgtcctcgtcgtccgacgacgacaacgccgtgccctcccccaccttctccctgttcctcgccttggcggagcagttcgtccccttcacgcatcccaaaacgcccaccgccacggatgtcgctctacaagcgggagaggggaagagatttgaggacttggacaatgaggtgagctacgagcggttccggcggcgcgagcggcgaggggtggtagcccgcgactacattgaggtgtactcctccatgctcggcagctacggccgcgccgtcgtggagcagcgcgttgtcatggtgaactggatcatggagcattcacaagcgatgaagctgcagccagagaccgtgttcatggggatagggctgatggaccgcttcttgacacgtggatatgtaaagggctctaggaacctgcagttgctgggaatcgcctgcaccaccttggcaacccgcattgaagagaatcaaccctataattgcatccttcaaaaagctttcaaagtagggatcaatacttacagccgaagtgaggtcgtcgccatggagtggctggttcaggaggtccttgacttccagtgctttgtcacaacaacccatcatttcctctggttctatctgaaggctgcgaatgcagatgacagagtcgaggacctggcgaagtacttggccttgctctcacttctggaccacaaacatctctccttctggccctccactgtggcagccgcagtggtagcccttgcttgccttgccacaaacaatgagtcatcatgccatttggttatggagactcacatgagaacgaagaatgatgatctgcctgaatgcctaatgagtctcgaatggttgaccaattatgcttcctga</cdnaseq>

Protein Sequence

<aaseq>MPPTMLASVPTRPRSHPFRRRRGAAAAAPPLLPDQIAAAAAAAA KRPAESSTSASSCFHSEVISATSTTCPTSLAAAQRPEKRPRYQDVDEEQPAASECSEI IGGARPRAAEVEVSESSCLASVLESYLACPEQLANDAETTAYSSAREDLTLSETEEEE EEEEVRSGPCICTDCSFSPLHESSSSSDDDNAVPSPTFSLFLALAEQFVPFTHPKTPT ATDVALQAGEGKRFEDLDNEVSYERFRRRERRGVVARDYIEVYSSMLGSYGRAVVEQR VVMVNWIMEHSQAMKLQPETVFMGIGLMDRFLTRGYVKGSRNLQLLGIACTTLATRIE ENQPYNCILQKAFKVGINTYSRSEVVAMEWLVQEVLDFQCFVTTTHHFLWFYLKAANA DDRVEDLAKYLALLSLLDHKHLSFWPSTVAAAVVALACLATNNESSCHLVMETHMRTK NDDLPECLMSLEWLTNYAS</aaseq>

Gene Sequence

<dnaseqindica>4291..4323#4123..4167#3685..3865#3469..3597#2083..2249#849..1019#61..744#gtaggcccgtagcatcacaaattcacaattcacacacaaagcacacagcgccgcacgccaatgcctcctaccatgcttgcatcggtgccgacgaggccgcgctcccatcccttccgccggcggcgaggcgcggcggcggcggctcctcctctgctccctgatcagatcgcggcggcggcggcggcggcagccaagcgacccgcggagtcgtccacctcggcctcctcctgcttccacagcgaggtcatctccgccacctccaccacctgccccacctccctcgccgcagctcagcgcccggagaagcggcctcggtaccaggatgtggacgaggagcagcccgccgcctccgagtgctccgagatcatcggtggcgcgaggccgcgcgccgccgaggtcgaggtctccgagtcgtcgtgcctcgcctccgtcctcgagtcctacctcgcctgccccgagcagctcgccaacgacgccgagacgaccgcctactcctcagcccgcgaggacctcacgctgtcggagaccgaggaggaggaggaggaggaggaggtgcgcagtggtccctgcatctgcaccgattgctcgtttagcccccttcatgagtcgtcctcgtcgtccgacgacgacaacgccgtgccctcccccaccttctccctgttcctcgccttggcggagcagttcgtccccttcacgcatcccaaaacgcccaccgccacggatgtcgctctacaagcgggagaggtaagcaggttccacacagcttctctcaaatttgttggagtttggctgctctctcccgaatcagtgcgacatttgatgtaatcagatgggaattattgtatcaggggaagagatttgaggacttggacaatgaggtgagctacgagcggttccggcggcgcgagcggcgaggggtggtagcccgcgactacattgaggtgtactcctccatgctcggcagctacggccgcgccgtcgtggagcagcgcgttgtcatggtgaactggatcatggaggtcagtatgctctgcattgtacacgtatgctgcgaccatgactttgccttggtccaataattcatctagctcgagcgcaatttgttgtgtggtagctgcagatgtttgttgcacgggtattgtgctgataatgcacatgtatactttcggagtgctgtactgatctagattctatcagcttatctgtctgactgatgtgttctgcaagaacagtagttgcttgcattttgcactaacatgctactctgcagtgtaaatgctgtgctgggtgggagtgctgaggtagcagatccggttgtgatcttgcatattttgtgtaggggaagctatctgataccaatatacgcattgcatttgctgattcgtttatcacacagttagctgcctgtacattttgcagcattccccgtgttagtctgccagcagtgtggtggtaatcctagtgatttcaatgtaactctagtcattaacttttatgtcatcgcattcaagttctatagagcagtgataaagattttctaggtgcttattttggcatgcttgcatattttttttggatgtaatggcatgcttgtatgaaaagaaaagagatacataggatttttctaggtgtttattttcgcacctgaaagttgctctgtagtcatttgccatctgaaatcccatggcattgggcattggcatatggcctccagaaatgtctgcatcactttttacttctaaacctatatatgcaataagtgttagaaaaacatattgccagtgtattccctttttttgtgtatccaccatcatctgaatttaatcttttctaactctagttccatcagtttatatttgcattgaaacttcaggtagcctttgaaaatgaaatcgctgtgtgttttttgtttgaagtttttttgggcaactcagcgataagtacttaagtgatatgatcatttatacttgtaatttgatttttctgaaaataatgtactgtcatttgtggagaatatgtttgttcttacatagagttcatacataacttgcaaagaatgacttgttctctatgcatcgctagcattcacaagcgatgaagctgcagccagagaccgtgttcatggggatagggctgatggaccgcttcttgacacgtggatatgtaaagggctctaggaacctgcagttgctgggaatcgcctgcaccaccttggcaacccgcattgaagagaatcaaccctataattggtaatggctcccttaaatgaccagtttcagtatgaatacttctgcaagttgttggtgtctgcttgtctggtactcacctaaatagttcgtctcatttgaatatagcatgtattattaaatgggatagtgctcaattgcaatgctgcaaattccttagtattctttgatagtttgatttttctgaaagttgaacttaattctaacagacattagcatgagtttatgagtttaattatgttctataaataacttaataacaacaggaacatccgatggtaactcatatctcatctagtagctatttatcactttcaatactgagcactgcatgtgagaactcagaccattggaccattgttctacaaaaaggtttcacacgatgggtattttagaaatgaagggcttgtttggttctaagccattgtgggccataccaattttttggcaatggcaagatttagccactccaaaatcttggcaaaggacttgtttggtttgttgacaaactttttggcaagattgattagtttagtatttagtttgctaccaaggaaaaatattggtgttgccaaaatttggtgacaaaaagaaagctaacaaaattttaggcagaccaaaatattggtatggttttgattggctgagaaccaaacacaccagaagtttcttgattgtgttgactatgatcaagcatctctcaaaataatttaccgcgccagttggcatccttgagctattgttttttaagaaaaaaagaactaagctatcaattattgggagagatgcgattttgagaaattatcacttgcatagatctccttgatatagttttatttctctgtttttgatgttacaataaagctattacatcagcgctctggtgggcgagatattctctgtgttttcccttaagttttaaagactaaactcatatgaatcttcaacatttttgaaagtagaccttatttgtatccctgagaacttgctagtaaatgaatgttttatgtgccacttattactgcacagaagcatgtgaagtgaacccaggaactattcttctttgcctgtctactttgcacgaagtatcacttttgaacttatgagtttgcctctggatgcgcatttgtttcaagcgcctagtttctgtcaagggcaatgtgcaatatagaccttttctttagaacactctacaggaacctaataatacgatctctttcagcatccttcaaaaagctttcaaagtagggatcaatacttacagccgaagtgaggtcgtcgccatggagtggctggttcaggaggtccttgacttccagtgctttgtcacaacaacccatcatttcctctggtactatgcctgtgtgtttgcttcattttctgtgtcagctggacagaatgaataagaaacttacaattgtttggttcaactttgcaggttctatctgaaggctgcgaatgcagatgacagagtcgaggacctggcgaagtacttggccttgctctcacttctggaccacaaacatctctccttctggccctccactgtggcagccgcagtggtagcccttgcttgccttgccacaaacaatgagtcatcatgccatttggttatggaggtaaatactttaatcttccatcactggctatgctatttctcttatatctgcagtctgctattcgttcagaacttccttaaggaaaaagattctgaacttttgctcagttttgtatgttgctgctttcattttatctcgtagccagatgacaaatgccatgaatcacctaggtcttcacatgcttattccaattcacaacatactgatccttgcaaagaatacaaatgtctaaccacttgctcttcacataaatgcagactcacatgagaacgaagaatgatgatctgcctgaatgcctaatggtttgttttctcctcaaattatgattctggtgaaaagtgttgtacacagtttgcagcaatttgactattacccggatctttagcgtgccatggcatataacgtgcagtaatccttttatgcagagtctcgaatggttgaccaattatgcttcctgatttgaacaaacccaggtgatatgccgacccaatcttctgcccattcccagaaacacagtgtagtacgtacagagtcgcttaggaggaggtgtatatagtacacgtgcactgtagctaattcttcgtgcatagcattagtttgacagcagggtagaaaagagggcaaagaagccggctaaacgtggttgtgatggcaccagacttatagggagcatcgcaaccacgaaattttgctactactgccggcttcagtgactacgactaacctcctgttgtaagctgtcttaaaatcagccttcgttgtgttaagggcaaccaaaggttgagactttgttgttctaatcaaacatcctgtttacaaattgcaactggtgccagaatgaaatttgttctccgggtggtattgcactgcacgaggttcgattctgtgaccctgaaagacgcatactcagatactctgatgctcaggtttcagattctgggatgaataaaatgctactagtagtatcatcttcttctggatctgcaaacagatgttcagttagctgaagatccagagtaccacctcgtttgctcaggtacatgtcatcaaaacatctactactaatctctagttttattctctagacttctctattccaatctatctccaggatgcaacaggaagggtctgcatccaggtgggctacctgaagtggacgaagcggtcatcttcgtgccgctgctcgagtggcctagtggggaccccggctgcgcccgatgcctcggccactttaaaaactcggatcgcgagagttcctgcacgccataaaaatgaggaaaacgaggtggggagggcgtggcttcttttctctatgatgaagtgcgtggcatttgttgagccatcctaatcagagtgttgttcatgcatgtgccccgaatgttgggggcgtctgcagaaagaagggagggcgttcgcgtacacccccctttcagccccacttgcgcccgcgctctcgttgagccgtctgccttttggggttctagagtgaatagggtcggcacgttagcggcgagccggcgacgggtaatgtggtgtgccaacaactttcagctgctgctgaagtgaagagcaggtggcgatcaaccagtcccggcactgaactactgaacctgaagtggttactccattcatcgacagagatatttaattatttgtcacttttagatgtaatattttaccacataaacctacaaatcataaacatataagtgacaaattatttaacgccacatcgaaaaatggtaaatgcttatttgccccttcccactctc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0225200, RefSeq:Os03g0225200