Os03g0226300

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0226300| Description = Similar to Pto kinase interactor 1| Version = NM_001055973.1 GI:115451674 GeneID:4332124| Length = 3284 bp| Definit...")
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Gene Name

Os03g0226300

Description

Similar to Pto kinase interactor 1

Version

NM_001055973.1 GI:115451674 GeneID:4332124

Length

3284 bp

Definition

Oryza sativa Japonica Group Os03g0226300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6654297..6657580

Sequence Coding Region

6654773..6654872,6655415..6655668,6655777..6655903,6656039..6656312,6656458..6656590
,6656740..6656826,6656909..6657028

Expression

GEO Profiles:Os03g0226300

Genome Context

<gbrowseImage1> name=NC_008396:6654297..6657580 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6654297..6657580 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatttgctgcggcggcgaggaggaggagacgtacgctccccgtgcagccagtcgcagtcgcagcaggcgcccgacacctgcgacgcagtacaatgcaggccctcgtaagccaagaggaccaaatgcacccaggagcggcggcccgccaccgaaggtgctctccatcgacgtgccagccatctccatgggcgagctgaacaacatcaccggacactttggacagagtgccttgataggagaaggttcgtacggtcgaatctacagggcggtgctgacctccggggagccggttgccataaaaaagcttgatcccagcgtgtcaagcgactctgaagcagacttctctgctcagctgtcaatggtttcgaggctcaagaacgagtatttcatccggctgatgggctactacctggatgcaaaccgaagaatcctggtctaccagtttgccacgcacggctccctgcatgacatcctacacgggaagaagggcgtgagggacgcggcgccggggccggcgctgaactggagccagcgggtgaaggtggcgtacggcgccgcgagagggctcgagtacctccacgagaaggcccagccgcccatcgtccaccgcgacgtgcggtcgagcaacgttctcctcttcgacggctacgagtccaagctcgccgacttcaacctcaccacccagcctcccgacggcgccgcgcggttgcactccacccgcgtcctcggaaccttcggctaccacgcgcccgagtacgcgatgacgggacagcttaatcagaagagcgatgtgtacagtttcggagtcatcctactggagttactgaccggcaggaagccagtggaccataccatgccgaagagacagcagagtcttgtaacctgggcgacgccaaggttgagcgaggacaaggtgaggcagtgcgtggatccgaaactcggggatgactatcctccaaaagcagttgccaagatggcggcggtagcggcgttgtgcgtgcaatacgagtcagatttccggccgaacatgaccatcgtggtgaaggcgctgcagccacttctcagcaagccagccggagcaggagggccctag</cdnaseq>

Protein Sequence

<aaseq>MICCGGEEEETYAPRAASRSRSRRPTPATQYNAGPRKPRGPNAP RSGGPPPKVLSIDVPAISMGELNNITGHFGQSALIGEGSYGRIYRAVLTSGEPVAIKK LDPSVSSDSEADFSAQLSMVSRLKNEYFIRLMGYYLDANRRILVYQFATHGSLHDILH GKKGVRDAAPGPALNWSQRVKVAYGAARGLEYLHEKAQPPIVHRDVRSSNVLLFDGYE SKLADFNLTTQPPDGAARLHSTRVLGTFGYHAPEYAMTGQLNQKSDVYSFGVILLELL TGRKPVDHTMPKRQQSLVTWATPRLSEDKVRQCVDPKLGDDYPPKAVAKMAAVAALCV QYESDFRPNMTIVVKALQPLLSKPAGAGGP</aaseq>

Gene Sequence

<dnaseqindica>477..576#1119..1372#1481..1607#1743..2016#2162..2294#2444..2530#2613..2732#gccttctccttcttctccgacggcgaacaccgtccatcgcgagaactcttacctcgtcggcgtcggcgtcggcgtcggcgaggaggagcaaacatttacggctggcttgcaatcttaatcgtacgtacttcttcatggcatatcttgtacagtatttattttttttaatccattaaaagcgtggttgtttttcattgtcctgtccgacgaacaaggccttaaaagttgacatgcatctcgtgaaaaggaaaaaaaaagaagcaacgttttctattgatttgttgcggccagcaacaccttttccattccgtgttctatccatgcgcggtttttctctatctgacgctcgtgacaatttcagttttgcagtgttcgtcattcaggaggctcccggccgatccggtggatcggatcggagcgggagcacaaactgcaaattgccacggtccttgcacttgatttccggagccaggaggatgatttgctgcggcggcgaggaggaggagacgtacgctccccgtgcagccagtcgcagtcgcagcaggcgcccgacacctgcgacgcagtacaatgcaggtgaaatcccgccgtttcctcctccggttctgcaggtggttagctgaaacagaggccaaggtgctcaactgtataatgttgcatcgtgatgataattgaattggcagaaagttcagattaaataccgcactgccagctctgtctttcttagtttcagaggcaattttaatctgaactttcagaaagaaaaattgtatagataagcagctgtaattttttgagggaaaataagaagctgtaattcgttatgactaccatccatattctctgttctaattggatacccatctgcacattcagatttaatgctcaagttactcactataccaaacatcagtaggagaaggtcgtagttcaatcgaccaacttgtgttgccttcgcagcatctcattttagagcttactagtacaagattcttcaacaaggccacatcaacttatgtcatcaatacagagagtttagcacggagtatgccacaatccttatgctgaatctgaagactgaaaattgtgcaaatctcctgtttttggttgtgtatcaggccctcgtaagccaagaggaccaaatgcacccaggagcggcggcccgccaccgaaggtgctctccatcgacgtgccagccatctccatgggcgagctgaacaacatcaccggacactttggacagagtgccttgataggagaaggttcgtacggtcgaatctacagggcggtgctgacctccggggagccggttgccataaaaaagcttgatcccagcgtgtcaagcgactctgaagcagacttctctgctcaggttaacgatcagtaaaacaattacacaacggattcgtgttcaacatcaaacttttgtgctgcaaatctacgttgctgattaaaaccatctggttccgtggacatgcagctgtcaatggtttcgaggctcaagaacgagtatttcatccggctgatgggctactacctggatgcaaaccgaagaatcctggtctaccagtttgccacgcacggctccctgcatgacatcctacacggtatacaaattcttcctccattctgatgatctacatgcattaatgaccacaggtttacagcgaattcttcttggcacatgaaacctgacacgacgtgttggtcgatccggaaaccaaaaaaaaaaaaaactgcagggaagaagggcgtgagggacgcggcgccggggccggcgctgaactggagccagcgggtgaaggtggcgtacggcgccgcgagagggctcgagtacctccacgagaaggcccagccgcccatcgtccaccgcgacgtgcggtcgagcaacgttctcctcttcgacggctacgagtccaagctcgccgacttcaacctcaccacccagcctcccgacggcgccgcgcggttgcactccacccgcgtcctcggaaccttcggctaccacgcgcccgagtaatacattctctgtctgaatccacactgtgtttgattggagaaaaacatgatcagaagattagtagattaattgactttcggtaagaaaggtcaaggttaatttttgaccgggcaaatggattctctctttcgctttctgaaggtacgcgatgacgggacagcttaatcagaagagcgatgtgtacagtttcggagtcatcctactggagttactgaccggcaggaagccagtggaccataccatgccgaagagacagcagagtcttgtaacctgggtagtgtagtaggccatgttcttgcacatcttgttggagcttttcatgtgttccaagagccatatgctcttgtggttgtctgaattctggttttttttttttggacaatgctgaatttctgaacattttctactggtgaaatggactaggcgacgccaaggttgagcgaggacaaggtgaggcagtgcgtggatccgaaactcggggatgactatcctccaaaagcagttgccaaggtaatacaagaccatcagtttcttgcaagtttgcaggaacgatctgagatgctatcttgtcgtgcattgtgtgtgttttcagatggcggcggtagcggcgttgtgcgtgcaatacgagtcagatttccggccgaacatgaccatcgtggtgaaggcgctgcagccacttctcagcaagccagccggagcaggagggccctagcagcacatgcatactaacaccagcccatgcatcaaaccaacttagcatccaaaacacattatgtgctctgttcttcttggatgctgagacttgttaaacagctggtgattgtaccatgtactactcacaaatcaatcaaactgctaaaagggtccaagggctcacagagtttcaggtcattggctgtgattctccattgttccttcagtccttacctttgtttaggtttcagatcagtagatatttttgcaatttcgctgtcccgttctgtaggtacgtaagggtccattccactgcatgactgcaagctacgtcgtgttcttatcttaagacatttattgacatcacaccgatgggagacaaactgacaaccgaaggactgtagagaaaataggaggcctccttatcaaagagagaaacattaatagagacaatatctcagtgtagctgcagtttgtgatgactgtggcttgattgttcgcattacgctgtcagctgttatgggttagtagttataactttctcactatgaacagatgatattttcatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0226300, RefSeq:Os03g0226300