Os03g0226600

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0226600| Description = Conserved hypothetical protein| Version = NM_001055975.1 GI:115451678 GeneID:4332126| Length = 6893 bp| Definition ...")
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Gene Name

Os03g0226600

Description

Conserved hypothetical protein

Version

NM_001055975.1 GI:115451678 GeneID:4332126

Length

6893 bp

Definition

Oryza sativa Japonica Group Os03g0226600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6674362..6681254

Sequence Coding Region

6674626..6674724,6675987..6676319,6676550..6676809,6677170..6677311,6677409..6677780
,6677898..6678029,6678749..6678877,6678967..6681030

Expression

GEO Profiles:Os03g0226600

Genome Context

<gbrowseImage1> name=NC_008396:6674362..6681254 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6674362..6681254 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgggtgtggcggcggagacggcggtggcgtcggcgtcgggatcggggatctggtcgcggcggcgggacgagatcacgttggatcgcctccagaagttctggaatggcttgcctcctcaagcgcgacaggagcttctcaaattggataagcaaaccctcattgagcaagcacgcaagaatttgtattgttcaaggtgcaatggattgcttctggaaagtttcatgcaaatagtcatgtatgggaagacactgcagcgtgatgcctcggatattaatcgtctgaacacaactggagaaacaaggattaggcaaggggaacaagaagacccatcagttcatccttggggaggccttgtagcaacaaaagatggcatccttacgcttcttgactgctttgtaaatgcaaaatcattgcgggtgcttcagaatgtatttgataatgcacgggcaagagaaagggaaagagagatgctttatcctgatgcatgtggtggcagtggcagaggatggattagccaacgcctagctagttatagcagggggtatggaacaagagaaacatgtgctctgcatactgctcgcctttcatgtgatacactggtggatttctggtcagcattgagtgaagaaactagattatctcttctgcggatgaaggaggaggatttcatggaaagacttatgcgtaggtttgagagcaagagattctgtcgagattgccgaaggaatgttatccgtgaattcaaggaactgaaggaactgaaacgcatgcgaagggaacctcgctgcaccagttggttctgtgttgcagacactgatttccagtgtgaggtgtttgaggatgctgtcataattgattggcgccaaactttatcagaggcagatggatcttatcatcattttgaatgggccattgggacagatgaagggcaatctgatgttttcggctttgaagatgttgggatgaatgtacaagtccacagagatggtattaatcttgatcagtttgaagactatttcataactttgagagcttggaagcttgatgggacctacacagagctgtgcgttaaagcacatgccttaaagggccaatcgtgcgtacaccacagactggtggtagggaatggttttgtgacaattacaaagggtgaaagtatcagaagtttctttgagcatgctgaagaggctgaggaagaggatgaagaagatgccatggacagggatggaaatgatcttgatggtgatggcttacatccacagaagcatgccaaaagtcctgaactggcaagagaatttcttttagatgccgcggcagttatatttaaagaacaggtcgagaaggcattcagagaaggtacagctcggcaaaatgcacacagtatttttgtgtctcttgcattagaacttttggaagagcgagtccatgtagcatgcaaagaaattattacgttggaaaagcagaacaagcttcttgaagaagaagagaaagaaaagcaagatgaacaagagcgcaggatgaggaggagaacaaaagagagagagaagaaacacaggagaaaagagaggctgaaagaaaaagagagggataaagggaaagaaatccttgggttgaaatcatcagatgataattcatgttcaactctcagaaactcaacatctactaatgatgaatcaacaaatactcctgactctagagattcagctagtgaagaagaagataattccacagtggtggatctttgctcccctgacacctttgttgatcaaacagcttgcagggagattagtgtgcaaaacaatatggactactgcaatacattgacagaatttgctcgaacaaatagcagtgaccttttcacatctggacaatcaaaatcatcaagatggaatctgaggctgagaaaagatttccctcaagatcagtcctcttgttgctatgatgagtgcggagatgaaaatggaagcattggtgattttcagtggcaatcaaaggaaaggacaagacatagtgcccgaagttgtaactcagtgtttactacaaataacagaacaagggatagacacaactacatttccttcagctgtgaccctcgtgatgactatgtaataaatgacagctgttcttcatcatcaactggatcaggtagggagacaaagatggcaagaaaaacaggagttgagagacctagggtgcagtaccgcaggtgctatcctttggacaactttattgtgtcaaaagaaagccgtactggtaatactcagcagaaaaatggtgctccaaagcaagtatgggagccaatggattctcaaaagaagaatttgttagacaacaaaaacaatgggtcgggagcagtttgtaatgttgatccaaccaaattagtggaacaagatagcagtgaatgcccaaattttgacgcagggcatgagccactaagtcaatcttctgaaagatccagggatatctgtaaatcagaaacagatcaaccatgtgaaaacaatgagaaaaatcaagctacttcttgcggtggtactattatggtggataaacaagactgctactcaacaaaagatgaaggttctgggcatgatgaagagctgatgatgaactctaccagttctgatggcttgtcttcatgtacgagtgaagcagatagagaaagcagcacaagcagtgtgacttctttgagcgctcaacatcaagaatcatcatcatctgactctgaggaatctccagagagagtcaacagcatcgaggaagctccatcaacaaagaccgtttcacggtccttacttgaggcttgtgcaggaaaaggtttcagagaataccaaccaaaagccatgcaccggcctcacaacgacagattgggattcaacataccccctttccaagatcagctgttgcatcaccaaagcatgcatgtacctacacattcttcagccacaatggggctccacaaccatccctgggctgctccagcaagtggatacatgcagtatgcccagcctagccacttctattccaatccacttggatttggagtacctggaaagcagtctcctgattttccagtgcagtacagcaatgttcatcacttcccagctcctgcttttagttatgctcctccggagccgattcggaagaccacgccaagcttcagagtcatgcatacatcgccgccttaccgaaatggattgcatcagagtcaaactgttggccatcctcatggagacccgactctagaaaggcatccttctcagcctaagccgttggacctgaaggatgctccaggagagaacaaaagctcgcctgaggggaatgcatccttctcgttgttccaattcaacctgccaatagctccccctgccccaccatcatccaaagatgacacgagtggagagtcagctacaagaacgccgttggctcaggttcaagttcagccttgctcgagggagcagactgatgtcaaagaatacaatctgttttgctcgaaaaatggcagcatgttttcatttatatcgagataa</cdnaseq>

Protein Sequence

<aaseq>MPGVAAETAVASASGSGIWSRRRDEITLDRLQKFWNGLPPQARQ ELLKLDKQTLIEQARKNLYCSRCNGLLLESFMQIVMYGKTLQRDASDINRLNTTGETR IRQGEQEDPSVHPWGGLVATKDGILTLLDCFVNAKSLRVLQNVFDNARAREREREMLY PDACGGSGRGWISQRLASYSRGYGTRETCALHTARLSCDTLVDFWSALSEETRLSLLR MKEEDFMERLMRRFESKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADTDFQ CEVFEDAVIIDWRQTLSEADGSYHHFEWAIGTDEGQSDVFGFEDVGMNVQVHRDGINL DQFEDYFITLRAWKLDGTYTELCVKAHALKGQSCVHHRLVVGNGFVTITKGESIRSFF EHAEEAEEEDEEDAMDRDGNDLDGDGLHPQKHAKSPELAREFLLDAAAVIFKEQVEKA FREGTARQNAHSIFVSLALELLEERVHVACKEIITLEKQNKLLEEEEKEKQDEQERRM RRRTKEREKKHRRKERLKEKERDKGKEILGLKSSDDNSCSTLRNSTSTNDESTNTPDS RDSASEEEDNSTVVDLCSPDTFVDQTACREISVQNNMDYCNTLTEFARTNSSDLFTSG QSKSSRWNLRLRKDFPQDQSSCCYDECGDENGSIGDFQWQSKERTRHSARSCNSVFTT NNRTRDRHNYISFSCDPRDDYVINDSCSSSSTGSGRETKMARKTGVERPRVQYRRCYP LDNFIVSKESRTGNTQQKNGAPKQVWEPMDSQKKNLLDNKNNGSGAVCNVDPTKLVEQ DSSECPNFDAGHEPLSQSSERSRDICKSETDQPCENNEKNQATSCGGTIMVDKQDCYS TKDEGSGHDEELMMNSTSSDGLSSCTSEADRESSTSSVTSLSAQHQESSSSDSEESPE RVNSIEEAPSTKTVSRSLLEACAGKGFREYQPKAMHRPHNDRLGFNIPPFQDQLLHHQ SMHVPTHSSATMGLHNHPWAAPASGYMQYAQPSHFYSNPLGFGVPGKQSPDFPVQYSN VHHFPAPAFSYAPPEPIRKTTPSFRVMHTSPPYRNGLHQSQTVGHPHGDPTLERHPSQ PKPLDLKDAPGENKSSPEGNASFSLFQFNLPIAPPAPPSSKDDTSGESATRTPLAQVQ VQPCSREQTDVKEYNLFCSKNGSMFSFISR</aaseq>

Gene Sequence

<dnaseqindica>265..363#1626..1958#2189..2448#2809..2950#3048..3419#3537..3668#4388..4516#4606..6669#gccttttacccccacacctcgcctcgcctcgcctcgtctcgcctcggcgctccgctcccctcctcccatctcgctcgccgtctgagccaaaacccactcggctagccaccggcggcggccgatcggacccggggccaagctgcggcgaagcggcgggtcacctccggctgcgtcgtcgctggcggcggccacttggatgggcggtggatcgggggcgagctcgtcgttgtgttgagggcgtctgcgggaggcttgaggggcgtgatgccgggtgtggcggcggagacggcggtggcgtcggcgtcgggatcggggatctggtcgcggcggcgggacgagatcacgttggatcgcctccagaaggtaggctcgcgtgggcaacgactttggtctggtcggggggctgggtttgatgtgagcggtgggaattcggggtgaatcgatggtggtgttatccgaggatcggactgagacagttgcttgcgtgtgggttggattagcgttttttgtttgtgcgtaattcgcagaagagttgtctgcaaatggcgtcggggaaagctaggttgtttggttgatctgtttttgttttatctaagcttgtgagtccatttgagtggtgaattttcatgcttagattcaatcgggttgcacttggtcatgggcatatatcctaattttgacttctgataggctcgattgtactggctttgagctgattctggcggtacattgctctaagctatggtggcaggtagatttgtacgcctggtttggtatataaacgtggggggcaaaatagtgttaccgattacttcctgtatgaattttggaattgaatcagtcattcctcgttttgcaagagcatggggcacttgatttgaaatgaagtaaaaaagttggggactggttttaggtcgttcatgattatttgagtagcctgtaagtgctgttatgctgatgaaatctgatgtatgaaaatgttcttgttaggaaaataaaattctgtcagaataattttaggaaagcaagccattggctcgtgtagaatgttttttttctttctaactctattaagtttttacgagtttctgaccttatcaacaaactatgcatattgtacacactcttcaatcataaatttcatgccttgcatatttgttcaattgctcatcctgttatttattttcttccattggagcaagctgataaactagtatagttgtaaatataatttgattgaagagtaactgctaaataagacataacgatatttgaacttctttccccattttggcacacagatattttgtttgcagctctgttgaagcatctccaatgatgcaccacctctgatgcttaaaatgtgatgctccaatagtcttgattagagttgtggttgattgatactgtcattaaactactgcagagctatctcattttatcgttgaacagtagattatactggattttattgtttttatgactttaaagtagcacttccctttgtgctggaaagcaaaccaaatagcttatttaagtgtgtcttagtgttatggaggtttttgtgatagccatgttgcaaagggaactgagcatgtcatggttgtggattaaacttgtttcagttctggaatggcttgcctcctcaagcgcgacaggagcttctcaaattggataagcaaaccctcattgagcaagcacgcaagaatttgtattgttcaaggtgcaatggattgcttctggaaagtttcatgcaaatagtcatgtatgggaagacactgcagcgtgatgcctcggatattaatcgtctgaacacaactggagaaacaaggattaggcaaggggaacaagaagacccatcagttcatccttggggaggccttgtagcaacaaaagatggcatccttacgcttcttgactgctttgtaaatgcaaaatcattgcgggtgcttcagaatgtaagttttcaacttgggattcatgtctctttttgtgtagttcattggcgattgtacaattaataactaatttgctctgatttttatattgatcccttctgttactttttcttaagcaacctccaagtcatgtttgtggagttaagttaacctagaagtttcaatgctagtacaggataggtttacttgattagcttataccttaatgcattcaacattggtttaatcaggtatttgataatgcacgggcaagagaaagggaaagagagatgctttatcctgatgcatgtggtggcagtggcagaggatggattagccaacgcctagctagttatagcagggggtatggaacaagagaaacatgtgctctgcatactgctcgcctttcatgtgatacactggtggatttctggtcagcattgagtgaagaaactagattatctcttctgcggatgaaggaggaggatttcatggaaagacttatgcgtaggtgagcataatgaagttgacctccatatcatgcaaatttaaattagtgataacaagttgttttgacctgaataggcattcagctcatggacattattagtaacatagttgaactagtgagttcataactgacttgcagatattcagtgaattctaattaacgatcatagctatctgatgcaaatacaataagggcctgctattttctttttcatatactgatagctatctatgatctacctagatatgtagggatttttttttttgccaataatgcatctatttgtttgtatttatccagcaactgacaattgatcagtgtaggattgattttattttttcttaatacaaatgtcaataggtttgagagcaagagattctgtcgagattgccgaaggaatgttatccgtgaattcaaggaactgaaggaactgaaacgcatgcgaagggaacctcgctgcaccagttggttctgtgttgcagacactgatttccagtgtgaggtcagggtgcctcctcgatgcccacttcactattctaacttcaattcaatagcttctgagttatattcaagttacatgtggcttctctattttctaggtgtttgaggatgctgtcataattgattggcgccaaactttatcagaggcagatggatcttatcatcattttgaatgggccattgggacagatgaagggcaatctgatgttttcggctttgaagatgttgggatgaatgtacaagtccacagagatggtattaatcttgatcagtttgaagactatttcataactttgagagcttggaagcttgatgggacctacacagagctgtgcgttaaagcacatgccttaaagggccaatcgtgcgtacaccacagactggtggtagggaatggttttgtgacaattacaaagggtgaaagtatcagaagtttctttgagcatgctgaagaggctgaggaagaggatgtacgtgattaccactaatggtggactatatctaactaggctagacttaattaggacatttattattggtgctaaaagttgccattctgagtttctgacccataaaaatatttgcaggaagaagatgccatggacagggatggaaatgatcttgatggtgatggcttacatccacagaagcatgccaaaagtcctgaactggcaagagaatttcttttagatgccgcggcagttatatttaaagaacaggtaatttgtaatcaaagtatagaaaagaaatgttggaagcaatacttgttgtaatgattgtggctgtacaaagaaagaaaaaaaacttgattttctaaaccacagctcccaaatttgggtgcacaacctgcatatcatacattccatttcaataagatatattttccttcaattgctacttcataatgaaggaacagtaacttaccagtgtttgtgattgctatatgaagtcctccacccacatacaccgtgtgatttgtctatcttatcaaatggcaactgagtggtatgttatttccagcagcactactcctttacctaaggttcatgaataaaagttgttttttgttgttcttgtttctacccgtcttgcccccatcatagcattgtcagtcactttagtcacttctgaggttgtgttttctagccactgttgtagccattaagtacatgccaatctagttctggacctccacatatcaaagtcaattttctttttttattattcaagatatttaatgcaataaaaaaattaaagaacgattctccacagagatatgtacataaggggatccatattcttttatcctgtaatattactagtagtggttactgtagttactaagatcaaatcaagatttatttattgagggttttgctaaaatttcagatgcttatgttacaagcttaagcatatgctaaatatgggttaattgcaggtcgagaaggcattcagagaaggtacagctcggcaaaatgcacacagtatttttgtgtctcttgcattagaacttttggaagagcgagtccatgtagcatgcaaagaaattattacgttggaaaagcaggtacttgtggtgattgcatagaagtcataaaatatttcatatcatccatgattttgtgcacatcaacttcgttgacacacttcttgcagaacaagcttcttgaagaagaagagaaagaaaagcaagatgaacaagagcgcaggatgaggaggagaacaaaagagagagagaagaaacacaggagaaaagagaggctgaaagaaaaagagagggataaagggaaagaaatccttgggttgaaatcatcagatgataattcatgttcaactctcagaaactcaacatctactaatgatgaatcaacaaatactcctgactctagagattcagctagtgaagaagaagataattccacagtggtggatctttgctcccctgacacctttgttgatcaaacagcttgcagggagattagtgtgcaaaacaatatggactactgcaatacattgacagaatttgctcgaacaaatagcagtgaccttttcacatctggacaatcaaaatcatcaagatggaatctgaggctgagaaaagatttccctcaagatcagtcctcttgttgctatgatgagtgcggagatgaaaatggaagcattggtgattttcagtggcaatcaaaggaaaggacaagacatagtgcccgaagttgtaactcagtgtttactacaaataacagaacaagggatagacacaactacatttccttcagctgtgaccctcgtgatgactatgtaataaatgacagctgttcttcatcatcaactggatcaggtagggagacaaagatggcaagaaaaacaggagttgagagacctagggtgcagtaccgcaggtgctatcctttggacaactttattgtgtcaaaagaaagccgtactggtaatactcagcagaaaaatggtgctccaaagcaagtatgggagccaatggattctcaaaagaagaatttgttagacaacaaaaacaatgggtcgggagcagtttgtaatgttgatccaaccaaattagtggaacaagatagcagtgaatgcccaaattttgacgcagggcatgagccactaagtcaatcttctgaaagatccagggatatctgtaaatcagaaacagatcaaccatgtgaaaacaatgagaaaaatcaagctacttcttgcggtggtactattatggtggataaacaagactgctactcaacaaaagatgaaggttctgggcatgatgaagagctgatgatgaactctaccagttctgatggcttgtcttcatgtacgagtgaagcagatagagaaagcagcacaagcagtgtgacttctttgagcgctcaacatcaagaatcatcatcatctgactctgaggaatctccagagagagtcaacagcatcgaggaagctccatcaacaaagaccgtttcacggtccttacttgaggcttgtgcaggaaaaggtttcagagaataccaaccaaaagccatgcaccggcctcacaacgacagattgggattcaacataccccctttccaagatcagctgttgcatcaccaaagcatgcatgtacctacacattcttcagccacaatggggctccacaaccatccctgggctgctccagcaagtggatacatgcagtatgcccagcctagccacttctattccaatccacttggatttggagtacctggaaagcagtctcctgattttccagtgcagtacagcaatgttcatcacttcccagctcctgcttttagttatgctcctccggagccgattcggaagaccacgccaagcttcagagtcatgcatacatcgccgccttaccgaaatggattgcatcagagtcaaactgttggccatcctcatggagacccgactctagaaaggcatccttctcagcctaagccgttggacctgaaggatgctccaggagagaacaaaagctcgcctgaggggaatgcatccttctcgttgttccaattcaacctgccaatagctccccctgccccaccatcatccaaagatgacacgagtggagagtcagctacaagaacgccgttggctcaggttcaagttcagccttgctcgagggagcagactgatgtcaaagaatacaatctgttttgctcgaaaaatggcagcatgttttcatttatatcgagataaaagcaacacacgcgggagatctgtactgttgttgctgttgtggttggcactatacttggtgagtgatttgtattgtccgaacgaaataaaagatgcttgagttttttccttgtattggctgcctctgtcttctttattttagcctcctccttgtacgttcctcgtgtgtatgaaaacttagtaaaggcatagatttcagaaatgcggtaaagttctagttcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0226600, RefSeq:Os03g0226600