Os03g0226800

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0226800| Description = Similar to Chromomethylase CMT3| Version = NM_001055977.2 GI:297600570 GeneID:4332128| Length = 6227 bp| Definition...")
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Gene Name

Os03g0226800

Description

Similar to Chromomethylase CMT3

Version

NM_001055977.2 GI:297600570 GeneID:4332128

Length

6227 bp

Definition

Oryza sativa Japonica Group Os03g0226800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6684940..6691166

Sequence Coding Region

6688696..6689088

Expression

GEO Profiles:Os03g0226800

Genome Context

<gbrowseImage1> name=NC_008396:6684940..6691166 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6684940..6691166 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attcgtaagggtgctgtggatgtcatatgtggtgggcctccatgtcaaggcatcagtgggttcaaccgattcagaaagcataatgatccacttgaggatgaaaagaacaaacagttggttgtttttatggatatagtgaagtatctgaggcccaaatatgtcctcatggaaaatgttgtggacatattgaaatttgcagatggattccttggacgctatgcaatgagttgccttgtggctatgaattatcaagctaggcttgggatgatggcggcaggatattatgggctaccgcagttcagaatgcgggcatttctctggggagcccttccatcaatggtttctctctatgctttcttaatcttattcctttgtgacacttttgcatattaa</cdnaseq>

Protein Sequence

<aaseq>IRKGAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMD IVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGYYGLPQFRM RAFLWGALPSMVSLYAFLILFLCDTFAY</aaseq>

Gene Sequence

<dnaseqindica>3757..4149#gtcacgcattcccgcgaatccggcctgctcgagacctcctcccgtcgcgacgccgcaagccatcaaagcgcctcctgcttccgctcctatccaaggcgaaccacactctgcgatcgagagctcgctgagccgtaaaaccctagctaatccttctctctccccccctctcgctgtcgtctccgtctccgtctccgatctccgcggcctcggttgcgggctgcggctgcgccggtgcggctccatggtcccggagccggctcccgcggcggcgacggagccgaggcgctccacgcgcaggcgcctaatgacggccgccgcgatggaggccgaggcggaggcggtggccgacctcgacgagatcgaccgcgagatgtcgcgcgccgagtcgcgcaagcgccagcgcaggacggcgaaggagaagcctggtgcccgtaagggagcgaccgaatggaagccggaggacgtggagaaggcggcggcggcggagggggtggccgagctcgacgagatcgaccgcgagatgccgcgccccgagttgcgcaagcgccagcgcaggacggcgaaggagaagcctagtgcccatgagggagcgaccgaatggaagccggaggacgtggagaaggcggcggcgcaggagcccgaggggaccgagctcgacagtgggttgtcgcccgcagagtcacgcggcaagcggcagcgcggggtggagaaggtcaagcgtcgtacccgtaagaagacggccaaggagaagacgaaggagacgaccgagaagtcggcggctcaggcgcccgagaagatgaaggtgaacgatgcgggtggcgcgctggccgaagacgtgtgcgcggatgagccggacgccgaacagatggccatggaggaggaggaggaggcagccgacgtgctggaagcagaggagaggatgggtaagtgtgtcggagaaggatcagccgagaaggctgcgacgaggaagagggtggcgcggccaagcactgcgagaagggtggaggactcagatgaccactttgtgggcgatccagtaccggatgatgaagcgcgacaacgatggcccgtgaggtacagtagaaaggtaagaatttctagtaaacctctaactctattctagagttatctcctggaatactaaagtttgttatcacttcgattttgagatgattttgaaaaataaaactgacatgctcttttgtttttgttgcaggggtctgattcgcttcttaagcaggagtatgtgtgtttttacgctaacattgttctgaaagtactcttaatctcttcttatgctgcttttataatggtgatcagaattttcatttatgcaggcctgacgaagatgaagaaatgaaggctcgatgtcactacctggctgctaatgtggatgatgaaatctatcatcttgatgatgatgtctatgtcaaggtcagtcatgaatatcttgttcacacttcttagaactttattaaccaatgttgtttcctagttttatgtattgcttttacgatagcatttttatatgactgactaacaagggatgattaatgtaccttttactttctgccatttttgttttgctcttcattataattgttattaaacttattatcctactatttgttctactggttgttaaccacgagatattaagttttcgattaatttgttggcactcattttgtacgcacgtaaattttctcatatcattgttctgtgcatatcaattttgtgtgggaaatgggtacataacttgatttgactgtggagattaataagaatatcatttcgtttggcttgcatatgctctatggtgtatcgttgtaaattattcatgcgttatctatttgcttatcatatgtcttgtctactaggtccatatgaaccaaactaactaatttgcaggctggtcctgatgaggaaaattacattggacggattactgaattttttgaaggagtcgaccgtggatcatatttctcttgtcagtggtttttccgtacagcagatacggtatgtctgaactctgaagtacctttttgttgctttttaatggaaatgtaacacttataagagacatgtatttgcaggtcatctcatcaaagttgttaaaggtgcatgatcatagacataaccataagcgtgtttttctttcaaaggagaagaatgacaacttgattgagtgcatagtctcaaaagtaaagattgcccatgttgatccaaatgtaagtgatatattcattaggcatatatcctatttaatgcttattatgttgtcatgttacagatgattttttgttgttgctaatatttaaacaaattcagatgacgcctcaagcaagagctcatgctatatctgattgtgacctgtactatgacatgtcttactctgttgcatattccacgtttgcaaatcttccagcaggtaattgtttacatgattcttttcccattgcaattatcataggtgtgtatgtgcatcattcactttgttgttaacttacataagagaccttttatgataaactgtatgagaaaaatattttatattatattactattttgaatatttgacagatgcaaaaatacacttgttgcttcaatattgtcaatctcaatgtttattgtcttatcttctgagggagctattttcttgtagataatgatggtgcattggggagtgaggcaacatcaaatatttcctgcgatgatgctgacaattcttctaagggaaaattgtcggctgatattgtggcaccatatagtgaacaaacagagacagcttctctgcttgatctttactcaggatgtggcgctatgtcaactgggctttgtttgggttttgcattttctggcataaatttagagactgtacgttttgtacttggtgtgactcctaactgcctactaagctcttttgtctattgacaatgttaatacttgctttattgtgcagaggtgggctgttgacataaacaaatatgcttgtgcttgtctcaaacataatcacccatactcgcaggtagtacattcctgtttccacttgtgtactgccactagatagtatcaccttgcacatccaccacatagacaaattcatgtgtttgcttttgcctctactttgtaggtgcggaacgagaaaactgaggattttcttgcccttattcagcagtgggatgcactttgtagaaaatatgttgtccacaaaaacgatacactagaacctagtatagatatgcccttaaatgatgctgacgatgtaaatgagcctcttccagaagatatattcgatgtagaggagctccttgagatatgctatggtgatccaagtaacacaggaaaaaatggcttgtggtttaaggtaatagacttaatgtttactagttaactagcattcctttaatttcatatttatttgtattaatctagtgtggtactatattattgaaaaagtaccctgtgaattatattttatataggtgcggtggaaagggtatgatccaagttatgatacatgggagccaattgatgggctcaggttggtatctctttcattatgcccctttcacattttttgttttattgttagtgcctaatcgttacaaatttcagtgattgccctgagcgtattaaagaatttgtagagaaaggacacaaggaaaatattttgcccttgcccgtaagtatctttctcatcttctttttttccttttcagttttgttgtcatgccatcttatcatgtcctttaaattcgtaagggtgctgtggatgtcatatgtggtgggcctccatgtcaaggcatcagtgggttcaaccgattcagaaagcataatgatccacttgaggatgaaaagaacaaacagttggttgtttttatggatatagtgaagtatctgaggcccaaatatgtcctcatggaaaatgttgtggacatattgaaatttgcagatggattccttggacgctatgcaatgagttgccttgtggctatgaattatcaagctaggcttgggatgatggcggcaggatattatgggctaccgcagttcagaatgcgggcatttctctggggagcccttccatcaatggtttctctctatgctttcttaatcttattcctttgtgacacttttgcatattaagatgttacattcaccaataggtattaccaaaattcccacttcctacccatgatgctgttgtgcgtggaatagtaccaactacattttcggtaagagaattgagtaaataattgccaagatttcattattgtattatgtattgtcttaatatttggctgctccatttgcagcaaagtgttgttgcatacaatgaggtagacacccgttgcctacgaaaggctcttctccttgcagatgccatatctgatttacccaaggtttgtgttattttcatatatccatggatctttatcttttgaatgctgattggacaattgtgttgttctttttttgtatgtgctatattacaaatttacaggttggaaatgatcaacctaaagatgtaatagagtatagtgttgcccccaaaactgaatttcaacggtatatccggaacaaccgtaaaggtagtccatgatttgttactaattgaattaacaaatatcgataaatactgttcatgaaatctactccctccgtcccataaaaaaacacacctaatatgggatgtgaaacagtctgttcagattcgtagtattaagatgatccatatcccttactaggtttatttttttatgggatggagggctatgttcgtttgttatgctctttccctctgcatttgtggaattctaactatttaaattttcattagtgtgtgggtttgacaattgccttgcccgttggtttatgcaattctaagtgttgctacttgtagtttcttgattgaatttctaggccaagttactttgttttgttattcattttcagacattcaggattactcttttcgtggagatgatccttctgaagaaggtaaattgtttgatcatcaacctctaaagctaaacaaagatgattatgagcgtgtgcagcggatacctgtaaaaaaggttagcaaggcttaagattgtcatgccagttactttcaataccttggttgcttacctttttttctgtttcagggagcgaactttcgtgatctaaagggcgtcatagttggcccagataatactgtgcggctggatccaaacatttcccgtgaacgactgtcatctgggaagcctttggtacttttatattttgctatatttcaacaactgcaatgtcaatgtttcctcttttgcatgccattaattactgcttctctggataggtgcctgactatgccatatctttcgtcaaggggaagtcaactaagtaagtacgttgagcataatggttcattttacacaatcttgattgataattctaattaatctggcaatgcagaccgtttggacgcctgtggtgggatgaaactgttcccactgtagttaccagagctgagcctcacaaccaggtatcattttttttttggcgtttttcccatcttaatgccacttcggttgtaattgtgcataaacggactcccccatattgcagattattttgcatcctagccaagaccgagttctgactattcgcgagaatgcaaggttgcaaggttttcctgactattacagattgatcggcccactaaaggagaagtaagtgcttataggatgtttgtatcgattgtagtggattcaggaatcagtaatatggactttagtgtccatattttggattgaattactcacagatataatagtatatgacagatgagtgttgtgtagttccattcttatgctatgtattcttgttcaatgtagatatatccaggttggcaatgcggttgcaattccagttgctcgagctttggggtatgctcttgggctggcctaccggggtgaatctgatggagatcgagcagtactcaaattgccagagagttttatttatgctgatcaagagacggttgttaaatcttcggcaggaactcctggaagtgaaatagctgattcggaacagttgtttgaatagtatgttatctgagtcacttgtatagttgggtgatgtgctataattgtttctgtatgagtttcgaacacggacagtgcatgcattgtccaatgctccaaacattcactggttaaccctggaactgagtaatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0226800, RefSeq:Os03g0226800