Os03g0228500

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0228500| Description = Conserved hypothetical protein| Version = NM_001055987.1 GI:115451702 GeneID:4332140| Length = 3426 bp| Definition ...")
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Gene Name

Os03g0228500

Description

Conserved hypothetical protein

Version

NM_001055987.1 GI:115451702 GeneID:4332140

Length

3426 bp

Definition

Oryza sativa Japonica Group Os03g0228500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6867774..6871199

Sequence Coding Region

6867970..6868378,6868484..6868599,6870899..6871024

Expression

GEO Profiles:Os03g0228500

Genome Context

<gbrowseImage1> name=NC_008396:6867774..6871199 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6867774..6871199 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgatctccgcgaactcggcatgcggcgggagccgtcgagggctgaggtggtggggcgtgccaaggacgacggggacttcgacgcgctccgccgcgccatcatccgcaaggtcaaggacaacgaggtgctacgcagcaacataattgcagaggtgaagcagtcagtggtaataaatgaagatggctctgaaaagttaaagctgaaagatctttctgatgcgatttaccaagatatcgggagcaaaataatgggtcaaatctcagacgagatatggggtgtcatcctatcaaatgaaattgatatccgaggaacttctgaaactgtctacaatagaatgatgaaccctgagcagcagcaggaccctccttcaaagaaactgaagaggaatgccaaagaggagcaagtgtccccagcaaaagcatcaacttctgttgcagtccagctggaagatgatgatccagaggaaccaccaggatttggtttcagtgatcatcagcgcagcaacatcatggcaactcagcagcagcagtcgtcaaatactgagaatcataaccaagtgaaaccaaatgaaggtgagcccaacgccgttagctgccctggggatgatgatgaggaggatcctgatgtgcctcctgggtttggttaa</cdnaseq>

Protein Sequence

<aaseq>MSDLRELGMRREPSRAEVVGRAKDDGDFDALRRAIIRKVKDNEV LRSNIIAEVKQSVVINEDGSEKLKLKDLSDAIYQDIGSKIMGQISDEIWGVILSNEID IRGTSETVYNRMMNPEQQQDPPSKKLKRNAKEEQVSPAKASTSVAVQLEDDDPEEPPG FGFSDHQRSNIMATQQQQSSNTENHNQVKPNEGEPNAVSCPGDDDEEDPDVPPGFG</aaseq>

Gene Sequence

<dnaseqindica>2822..3230#2601..2716#176..301#tcctctcgcctctcgctctctccgacgaaaccccaaaattttctgagggaagcaagcggcggcgcacggagtcccctccctccccaatctgcaacgaactcgaagggcggcggcggcggcgtacgccggtgaatcaggttcccgcggcggagccgtgctccacccccgcgctcccatgagcgatctccgcgaactcggcatgcggcgggagccgtcgagggctgaggtggtggggcgtgccaaggacgacggggacttcgacgcgctccgccgcgccatcatccgcaaggtcaaggacaacgtaagctcccatcatacgctccccactttccccctcgtataccgcaggatttgctgtaaggggtcgctctagattgaaaccctcgctgagaattgcgttgatcctgcgtttggtatggggtcactgacagtatagccgcgattgggtgggttcgattttcctgaagtcatccatggggacagtggatttagcatagatcatcctgcattatctcaacttcaggcgaactgcaatgtgccttcttgtgttaagttttagacattgggtgtgaatgtatatgctctgagcaggtctgttctcatgaattaccagaactacgtgattcaagttttatcaggaatgtaaccaatcgtatgttgctgtagcaacgcatttagaacttgataatatattcggaggaaatttggaacgtaagaaaattttgcagcttctgtttgtgtgctttacttcattactacattgtttggtaaccttgcatatcttatacagtcatctattgacatatgaatgtgagtagggttgcgcctttgttcgtcataaatgagtcatattgattaccagcttattcatatcatcggaaattgtgtttcaggtccatatattcttacattgtccaatgaaaccattgcgtcctcaatagtcattttactttgtccatgtgagtagtaaagttggaaattttcttgtagtagcattgtgttttctagttttggtgttgggaattgggaagcatacacaattacacattgttgacatatctttctattatactggtgggttaaccaaggcgttgctgcaggaatttgaaccgactaattgtgtaaaaaaacaaggaaatttgcaagtattggttaaagatggtgtggccgttgggctgtcagacatctaatggctgaaacaattatgatgacctggctcaacgtgagggcttcttcatagccataaggccatttccaacccaagacactagtcatagttttcataaactctacatcatcaagaaactagtactagatttcaatgcaaacaccactttttcatacttaaatttaatgctacttatctcacatgatatcttggatgttgtgtagaaaccatgtctcatgcaagacctggttttcttctctttcctcatttattcacttggcacatcatctttcatcctaggtggtagcttatttaatgctatggacaacatcctagtcattgggttgggaatggcctaagttaactgcaattagtggattgtacttatatagatagtaaggattattatagataaataaaagataaatgtgctgtagagctgtgtcgaaagggatacagtgaatggattgaagaatcaagcgccccataaccccattgaaggttgaagatagtctcattttatgccataaatttggcatgccttcattgttatttatgtggaagaggtaactagtacccaagacgtttgtagcaccccaccgctgtgactgtaaacgtgttcccatgatatatactaatatcccacaactgtaaacttgtaaatgcatcccatgactgcaaaaaagagttgtatcctagagtatagaatttgttttttataatagtcttggcttcatactgatttgcctgcaaacaaggctgaaagtttagtacgtatcactctgatttacatactatggcccaatagcatacaggtatgagccagataagtcctaatgttgtgtagttccataagtttgtgtgtattatatgtacagccagcatacatggttaaccaagcttaggccctctttgtttaggcttataagccaacttataagtcgaaaagtctaagcctaaacaaacaagcagcttttccgtttagcttttttgaagccataagccactctaacactattaagccaaaaactaggttggagaagcttttttagtttatgtgaggtagatgtatgactcaaccactaaacctaggacattaaatccaccggcttataaatcatataagccaataagctgacttaaaagtctaggccaataagcctaagcctaaacaaagagggccttagtgtgcctcactctgatttgcatactgtggcctagcagcacacatactgtgagccagataagttttaaatgctgtgtttctataagtttatgtgtattatatgtacatccagcatacatggttaatcaagcttagcatgtttcactctgatttactgctggcctagcagaagcacacatctgaagaccagataagaccttaatgctgtgtagttgtataagttggctgcaatttattttcatgcaggaggtgctacgcagcaacataattgcagaggtgaagcagtcagtggtaataaatgaagatggctctgaaaagttaaagctgaaagatctttctgatgcgatttaccaagatatcgggtaagctgaacaactacattttagtttttctttattgttgttttttactacaccggactagatatcaataatgtgatatgttattgtgatgtgctttcgaaccaggagcaaaataatgggtcaaatctcagacgagatatggggtgtcatcctatcaaatgaaattgatatccgaggaacttctgaaactgtctacaatagaatgatgaaccctgagcagcagcaggaccctccttcaaagaaactgaagaggaatgccaaagaggagcaagtgtccccagcaaaagcatcaacttctgttgcagtccagctggaagatgatgatccagaggaaccaccaggatttggtttcagtgatcatcagcgcagcaacatcatggcaactcagcagcagcagtcgtcaaatactgagaatcataaccaagtgaaaccaaatgaaggtgagcccaacgccgttagctgccctggggatgatgatgaggaggatcctgatgtgcctcctgggtttggttaacatcctgcaatcttctattgtggtgtgatctgtgatgtttcttgtcaacactaagaaaaatgatttagtttacatttgctgctcgaggggttcatttgaatattgaatcatgaaaccgatatgattgggatgagttcatgttgctcctagcttcagcctcttatttatgagggaacaaatgggcatttaagcgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0228500, RefSeq:Os03g0228500