Os03g0229200

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0229200| Description = Similar to Transposase insC for insertion element IS2A/D/F/H/I/K| Version = NM_001186398.1 GI:297721926 GeneID:926763...")
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Gene Name

Os03g0229200

Description

Similar to Transposase insC for insertion element IS2A/D/F/H/I/K

Version

NM_001186398.1 GI:297721926 GeneID:9267639

Length

2570 bp

Definition

Oryza sativa Japonica Group Os03g0229200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6887427..6889996

Sequence Coding Region

6887427..6887438,6887525..6887598,6888941..6889629,6889722..6889996

Expression

GEO Profiles:Os03g0229200

Genome Context

<gbrowseImage1> name=NC_008396:6887427..6889996 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6887427..6889996 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacggtctccctcgttgcccggcaacatggtgtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgctgtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagattaaagaactccagcgcctgctcggcaagaaaacgatggaaaatgaactcctcaaagaagccgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatggggatcgtcacactgatgatacggatgtgcttctccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggtatgggcgctgcttcgcagacaggcagaacttgatggtatgcctgcgatcaatgccaaacgtgtttaccggatcatgcgccagaatgcgctgttgcttgagcgaaaacctgctgtaccgccatcgaaacgggcacatacaggcagagtggccgtgaaagaaagcaatcagcgatggtgctctgacgggttcgagttctgctgtgataacggagagagactgcgtgtcacgttcgcgctggactgctgtgatcgtgaggcactgcactgggcggtcactaccggcggcttcaacagtgaaacagtacaggacgtcatgctgggagcggtggaacgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatattggatttttgtcaaagctggttctaaggttaagtagagcaaggggcttaacaaagactgggaatttacaaaagcggatacgataa</cdnaseq>

Protein Sequence

<aaseq>MTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASEL AAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGDRHTDDTDVLL RIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPS KRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSE TVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPE SNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHIGFLSKLVLRLSR ARGLTKTGNLQKRIR</aaseq>

Gene Sequence

<dnaseqindica>2559..2570#2399..2472#368..1056#1..275#atgacggtctccctcgttgcccggcaacatggtgtagcagccagccagttatttctctggcgtaagcaataccaggaaggaagtcttactgctgtcgccgccggagaacaggttgttcctgcctctgaacttgctgccgccatgaagcagattaaagaactccagcgcctgctcggcaagaaaacgatggaaaatgaactcctcaaagaagccgttgaatatggacgggcaaaaaagtggatagcgcacgcgcccttattgcccggggatggggagtaagcttagtcagccgttgtctccgggtgtcgcgtgcgcagttgcacgtcattctcagacgaaccgatgactggatggatggccgccgcagtcgtcacactgatgatacggatgtgcttctccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggtatgggcgctgcttcgcagacaggcagaacttgatggtatgcctgcgatcaatgccaaacgtgtttaccggatcatgcgccagaatgcgctgttgcttgagcgaaaacctgctgtaccgccatcgaaacgggcacatacaggcagagtggccgtgaaagaaagcaatcagcgatggtgctctgacgggttcgagttctgctgtgataacggagagagactgcgtgtcacgttcgcgctggactgctgtgatcgtgaggcactgcactgggcggtcactaccggcggcttcaacagtgaaacagtacaggacgtcatgctgggagcggtggaacgccgcttcggcaacgatcttccgtcgtctccagtggagtggctgacggataatggttcatgctaccgggctaatgaaacacgccagttcgcccggatgttgggacttgaaccgaagaacacggcggtgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaaatatgtgctaaaagtcaatggtgtcaaatattttgaaacggaggagtaatttataactgctgaattcactgaatctctcgcaggctcttagttcacgtaacagtagctagatagctctccacttttgcatggatccgattccgtgcacaaggtaattaagagcttatcgtaatgtagaatttacacttgctgaaacatatgcacaaactaaagctgtcgtgcatctgaagccatcaagagaatgttacggtagtaataaagttgagatagtgagtttggcgtcagatgcacattctcattgaaaagtaaatagtcgttcggttgactcgttgtaaatgtgttatatatatatatatatatatatatatatatatatatatatatatagagagagagagagagagagagagagagagagaggggggggtatatatgtgtgtgatctctcatctctgtgtgtgtagcatcaagactcaagagactaggtagatgtagcctagaaaaaagacgatcgtacgtgcagaaaagcatgagactgacaagtcaagcttgggaggataaaccagagagataaggcaaaactaaccatacagaaatatactcctttaattaatttgtagtttggcattaagttttatcttatagcaccgactttatggatgtggaataatggaaatatataggacgtacggggcactagctagcagcagcagctggatcttatactaagtaccattaatattgcatatataatgtatttgcacttaatggcatcgttagttagggtggcatgtgcatgcaccactagtggtagtactgccatccaattcagcaggctatcccccactatacatatggttgctgtatagagcgaatacaatagcacgttataagtcagctatatatatatgcacatgtggagaagataaaagaagagagaataacagagggctatagatttgtagttagctgtagcatggactccaaaacattgcgtgtttataagaggtaggatcatatattaattatgtagtatatatttataagtaactattgtatggatgaactattaaaatagctatatagtatttgaagctaatagttggctatactagtattaaacttgctcttagcttagcatgaaggactaattaatgagtagttatggacgtagtttaattaacgcacaactgccattatctctataatgatgatggattgtacttttcgtgtcatgttgacagttggatttttgtcaaagctggttctaaggttaagtagagcaaggggcttaacaaagactgggaatttacaaaaggtaaattgcaaggggcactatcaaatagaacacactttgggctccatttcgcattattgcagttgatttttttttcattattgcagcggatacgataa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0229200, RefSeq:Os03g0229200