Os03g0231700

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Revision as of 12:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0231700| Description = Similar to Squalene monooxygenase 2 (EC 1.14.99.7)| Version = NM_001055997.1 GI:115451722 GeneID:4332152| Length = 5...")
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Gene Name

Os03g0231700

Description

Similar to Squalene monooxygenase 2 (EC 1.14.99.7)

Version

NM_001055997.1 GI:115451722 GeneID:4332152

Length

5296 bp

Definition

Oryza sativa Japonica Group Os03g0231700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7000186..7005481

Sequence Coding Region

7000699..7000708,7002309..7002412,7002577..7002855,7002948..7003223,7003306..7003524
,7003628..7003796,7004081..7004255,7004323..7004434,7005176..7005406

Expression

GEO Profiles:Os03g0231700

Genome Context

<gbrowseImage1> name=NC_008396:7000186..7005481 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7000186..7005481 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgcggtcgccggcgccgggcagctcgttggcctcgccgcggccacgctcctcacggcggccttcctcgtcgcagtgaagatggggtggcggcgccgccgccgccaacgggaggtcgcgccggagggtggctgccgggttgttggcggcgatgggggtgaccggacggacatcgtcattgttggtgccggggtcgccggatctgcgctcgcctacacgctcggaaaggatgggcgacgagtgcatgttatagagcgggacatgacggagcctgatagaattgttggtgaactgctacagcctggtggctatttgaaattgatggagctgggtcttgaggattgtgttgaagaaatcgatgctcagcgtgtccttggttacgcattgttgaaagatgggagaaacacaaagctttcttatcccttggagaagttccattcagatgttgctggtaggagctttcacaatggacggtttatacagaagatgcgtcaaaaagctgcatctttgcctaatgttcatttggagcaaggaaccgttacatcattgctcgaagaaggtggcacggttaagggtgttcaatacaagacaaagtcaggtgaagaattaaaggcctatgcaccattgacaattgtatgcgatggctgtttctcaaacctacggcgtgtcctgtgctctccaaaggttgatgtgccatcctgttttgttgggttggttttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttcacctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctgggcagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaagactgtggttgcacctcagattcctccagaactccatgattctttcattgcagcaattgataaaggaagcataaggacaatgccaaataggagtatgccagctgctccacttccaacccctggcgcgctgttgatgggtgatgcattcaacatgcgacatcctttaactggtggtggaatgaccgttgcgttttctgacattgttgtcctacgcaatcttctcaagcctctcggcaacctgcacgatgcaccttccctgtgcaagtaccttgaatcgttctatacactgcggaagcctgttgcttctacaatcaacacactggctggtgctctgtacaaggtcttctgtgcctcaactgaccaggctaagaatgagatgcgagaagcttgctttgattacttgagccttggaggagtcttctcaaatgggcctattgctcttctctctggcctcaatcctcggcctctgagtttagtagcccacttctttgctgttgctatctatggcgttggacgcctaatgctccccgtcccttcacctaaacgcatgtggatcggcgcgagactggtttccggtgcatgtggtatcatcttcccaatcatcaaagctgaaggtgtgaggcaaatgttcttccctgctacagtccctgcatattaccgggcccctcctccaatggaatccggataa</cdnaseq>

Protein Sequence

<aaseq>MDAVAGAGQLVGLAAATLLTAAFLVAVKMGWRRRRRQREVAPEG GCRVVGGDGGDRTDIVIVGAGVAGSALAYTLGKDGRRVHVIERDMTEPDRIVGELLQP GGYLKLMELGLEDCVEEIDAQRVLGYALLKDGRNTKLSYPLEKFHSDVAGRSFHNGRF IQKMRQKAASLPNVHLEQGTVTSLLEEGGTVKGVQYKTKSGEELKAYAPLTIVCDGCF SNLRRVLCSPKVDVPSCFVGLVLENCQLPHPNHGHVILANPSPILCYPISSTEIRCLV DIPGQKVPSMATGEMAKYLKTVVAPQIPPELHDSFIAAIDKGSIRTMPNRSMPAAPLP TPGALLMGDAFNMRHPLTGGGMTVAFSDIVVLRNLLKPLGNLHDAPSLCKYLESFYTL RKPVASTINTLAGALYKVFCASTDQAKNEMREACFDYLSLGGVFSNGPIALLSGLNPR PLSLVAHFFAVAIYGVGRLMLPVPSPKRMWIGARLVSGACGIIFPIIKAEGVRQMFFP ATVPAYYRAPPPMESG</aaseq>

Gene Sequence

<dnaseqindica>4774..4783#3070..3173#2627..2905#2259..2534#1958..2176#1686..1854#1227..1401#1048..1159#76..306#agtctcccgtcacctcgcttgcacttctctaagcttccacccacccacgtacgtacgcacgcagagcagcaagaaatggatgcggtcgccggcgccgggcagctcgttggcctcgccgcggccacgctcctcacggcggccttcctcgtcgcagtgaagatggggtggcggcgccgccgccgccaacgggaggtcgcgccggagggtggctgccgggttgttggcggcgatgggggtgaccggacggacatcgtcattgttggtgccggggtcgccggatctgcgctcgcctacacgctcggaaaggtggctacatttttgtctctcactcgtttgttgacgtactcgcatttggttgaggcgaatcgttcgtatctttttaggctggaattttgctttcgtaactactactagtaccagtctaccaccaacttgtaagtggcgcaccaatgcaccattgatacgaaaatgttttatttgttttttctaaaagtaatacatctgggttttttttctttaaaccgggccaacaatagctggtgttatgtacttatgttcagtacgagatgcagtttatgtacacttttcacttaggagtaaaattaccaaagcgccaggttttttttaacaatactatgttttaggattagtgcaaatttctaatcatcaagagttttaccatcatcttccttaaaaccacctagattgaccatggaactgtactagttccatttcactctatttctcacttaaaatactttcgtactataattttagtaacctgtacggtgaaaataatgtcttgtagaacgtgaagagtcaaaattgctattgatacaaacacattgagataccatagtgtcttttgtatttggtagaatgaatcacttctattgtactagtatcattcatgttatccgacaacagaacactcaatagtaaaaatgcagtcatgtatctcgttaccatcaagcgatgcattgtggtaaaaacagaaatatcctgaaaaagaaaatctaatattcctggtttcgtttgttgaattaggatgggcgacgagtgcatgttatagagcgggacatgacggagcctgatagaattgttggtgaactgctacagcctggtggctatttgaaattgatggagctgggtcttgagggtaagagtggcatttttcgaaaagcatcgtcagtactttgtacttaatgtcctttgattttattcagattgtgttgaagaaatcgatgctcagcgtgtccttggttacgcattgttgaaagatgggagaaacacaaagctttcttatcccttggagaagttccattcagatgttgctggtaggagctttcacaatggacggtttatacagaagatgcgtcaaaaagctgcatctttgcctaagtaataacttttgcgcatgcaagtttattttattgaaaaatcatatatttatatagttcttctgaataatgccatgtgaacattccatttgtttatattactctactggattaatacatttgattgtgtcaatttcttgattatctacacctccagaatgatatactctagacggatctattggatttacatacttgattatgattatgcaaaatttactactttgggcttttgctgtccactcattctctctttttatgtaaaaaaaatacacctgctttcagtgttcatttggagcaaggaaccgttacatcattgctcgaagaaggtggcacggttaagggtgttcaatacaagacaaagtcaggtgaagaattaaaggcctatgcaccattgacaattgtatgcgatggctgtttctcaaacctacggcgtgtcctgtgctctccaaaggtacatttttcaaagtatactgatttgcttcttgctgaattcaccaatactatttttgacttgactgaattcactaatattaatgggaaatacatgcgcttaggttgatgtgccatcctgttttgttgggttggttttggagaattgtcaacttcctcacccaaaccatggccatgttatcctggctaatccttcacctatcctatgttacccgataagcagcactgagattcgttgtttggttgatatccctgggcagaaggtgccttccatggcaaccggtgaaatggcaaaatatctcaagactgtggttgcacctcaggtattaatttttgctctaccaagtgtaattattattgtgtactcttcacaactagatgctaattgaaatgttatgttttcagattcctccagaactccatgattctttcattgcagcaattgataaaggaagcataaggacaatgccaaataggagtatgccagctgctccacttccaacccctggcgcgctgttgatgggtgatgcattcaacatgcgacatcctttaactggtggtggaatgaccgttgcgttttctgacattgttgtcctacgcaatcttctcaagcctctcggcaacctgcacgatgcaccttccctgtgcaagtaccttgaatcgttctatacactgcggaaggtcagacttcactcttcatgtcacagttaaccacctagttttctcagaatgtgtatacggttttagtaaatacaatgctattatcttttcagcctgttgcttctacaatcaacacactggctggtgctctgtacaaggtcttctgtgcctcaactgaccaggctaagaatgagatgcgagaagcttgctttgattacttgagccttggaggagtcttctcaaatgggcctattgctcttctctctggcctcaatcctcggcctctgagtttagtagcccacttctttgctgttgctatctatggcgttggacgcctaatgctccccgtcccttcacctaaacgcatgtggatcggcgcgagactggtttccgtaagttcctcaaatcttcttctttttttaacatcctcaaagttcaaatgcacggtcatttatacacagaaaactttgtggcagcctctctgacattttctcatcaaaatccatacaactgcagacgatttcattttctctacataactgaattttcactgcagggtgcatgtggtatcatcttcccaatcatcaaagctgaaggtgtgaggcaaatgttcttccctgctacagtccctgcatattaccgggcccctcctccaatggagtaagaatctccatgttagcctatggtgtttgctgttctttagttcttttgagctgtcgagtgtgctcattagagtagtctgttcttcctataggaaattgggatgtgtatcgattgtcaatactaagttgtatatccctctgaacttgctaatgcgtcttgctcattatctcttttagaatatttgaggtgctctgcttgtctctactgcaccgttggaatgagctagttccttgtttttatgggcacacttcctaaatgccacgcttttttgaaaaaaataatctttctagaagttttttttaaaaaaataaatgattttttttttcaaaattgtaatagttaatcataaataattatgtgttaatgacttatctcatctcgtgtgccgctgaaaagctcaactcaaccactaattcgaacagtgctttaccctactgaattccatggaccagaatagtgtttgatctgtaaagccctgtaggcttaggctggctgggaaatctaagagcaagttcaatagtatagccaactactagctccaattcatctatagccaatctaatagctcattcatataatagttacatactacactattaatacctagtcccacctgtcatactcacaccgcgtcttgaagttcgtgctacagctggctacaaatctgtagcccgctactcttctctctccttatttatctccttaaaaaaatatttgcagctggcttatagcctgctattgtacctgctttaagggggtgtttgggagtctctccaaaaaaaaattaaatctttaccctagggacttattttttagaagagggactactcccaaacaccccctaaactagtcgctttcgtccttgcaagtaatccacgatcaccgaaatcttcttttaagctgcttgttttgttgaaaaactgaaaatccgttacctttgttatgtcttatttgaagaccttaagattttaagtagctgtttgttagccatcttaagagaatatagagaaacggtaaaacccaacttttgacttctgttttttatttaattgtgtacctatatcgtcttagagaatatgatggactgtttgcgaaaatattttaattctgaaaaaattatagctgttaaaagctctcctaagcggactcttaatcgagactctagttgtacaaagaaacaaaaaatcttgtatgcaactaaagaagcaaaatcattcaaggaaaagatatagtagtaggacaaccacctggacaggttgaccagaaatctagagcacacctccaaacctgacgtatgaactcctactagtaaggacaagactagtgagcctctggaagctctttagagcaggttcaatagtatagcctactactgacttcaattcatctatagctaatttaatagctaatttatacaatagttgcttactatactattaatatatagtttcacctatcatacatgttgcgtcttggagtacgtgctgcaactggctacaaatctgtagcctactgctcttctctctcatcgtttatctcattaaaatatatgtttataactggctaatagcatgctattttacctgctcttagccagatccggataacgcatatcaatgctatcctgcatcgatcatgccgtttgtgtcccctgatctcggagctgctggaagcagaaaaaggaacagaagtaccgtgtttgtttcggcatcgaactcttcccttcaaacgtctaaatgcatgcacaggcgatatgacgtacacatacatgcagtaattaagcgccggtgggtatttggatatttggattagcatacccacgtggaggtcgtccaagaaaacgaccacttaacctcgtgtcaaaatcggcgtgtacttccgtttcgtgtcactgcagctagagtggcaaatttggccacttccctttcgttgccactgtgaactgctagctgcggctgtcctgctgctacttgcttcacgcgtgcgtgaaagtacattaggagaaatcaacatctgatgtttatggattgggaaaggaacaacgacgtcaaggctgtcacaacttaaaattaattgtaaacgttgtacatcaaaacagttgccttcaatcggctttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0231700, RefSeq:Os03g0231700