Os03g0231800

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Revision as of 12:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0231800| Description = Similar to Squalene monooxygenase 1 (EC 1.14.99.7)| Version = NM_001055998.1 GI:115451724 GeneID:4332153| Length = 4...")
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Gene Name

Os03g0231800

Description

Similar to Squalene monooxygenase 1 (EC 1.14.99.7)

Version

NM_001055998.1 GI:115451724 GeneID:4332153

Length

4822 bp

Definition

Oryza sativa Japonica Group Os03g0231800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7006996..7011817

Sequence Coding Region

7007272..7007379,7007562..7007840,7007926..7008201,7008293..7008511,7008591..7008759
,7009041..7009215,7009322..7009433,7011399..7011653

Expression

GEO Profiles:Os03g0231800

Genome Context

<gbrowseImage1> name=NC_008396:7006996..7011817 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7006996..7011817 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggtcgccgccggcaccgggcagctcattggcgtcgccgtggccacgctcctcgcggcgatcttcctcgccgccgcgcttcttggcagccgccggcgccggcggcgggcgccgttggcagggaagcctgcggccgtgggtggctgcggggtggccgacggcgaagggtgcggcggggatggccggaccgacgtcatcgtcgtcggagccggggtcgccggatctgcgctggcatacacgctcggaaaggatggccgtcgtgtgcatgttatagagagagacctaacagagcctgatagaattgtcggtgaactgttacaacctggtggctacctgaaattgatcgagttgggtctcgaggattgtgttcaagaaatagatgctcagcgtgtccttggttacgcgttattcaaagatgggaaagacacaaaactctcctatcccttggagaagttccactcagatgttgctggtaggagctttcacaatggacggtttatacagaggatgcgccagaaagctgcatctttgcctaatgttcaattggagcaaggaactgttacatcattggttgaagaagatggtacagttaagggtgttaaatacaagaccaagtcaggtgaagaattaaaagcatatgcacctctgacaattgtatgcgatggctgtttctcaaaccttcgccgcgccctttgctctccaaaggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaacttcctcatgcaaaccatggccatgttgtcctggccaatccttcacctatcctattttacccaataagcagcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttccatagcaaacggtgaaatggcaaaatatctcaaaacagtggttgcacctcagattcctccagaaatctatgattcattcatagcagccattgataagggaagcataagaacaatgccaaacaggagcatgccggctgctccacatccaacccctggtgcacttttgatgggtgatgcattcaacatgcggcatcctttgactggtggcggaatgactgttgcattatctgacattgttgtgctacgtaatcttctcaagcctctccgcaatctgcatgatgcatctgctctttgcaaataccttgaatcattctatacactgcggaagccggttgcttctaccataaacacattagctggtgctctatacaaggttttcagtgcctcacctgatcaggctaggaatgagatgcgccaagcctgctttgattacttgagccttggaggtgtcttttcaaatgggcctattgctcttctgtctggtctgaatcctcgaccattgagtttagtggcacatttctttgctgtcgctatctatggtgtcggtcgcctaatgcttcccctcccttcacctaaacgcatgtggatcggcgtaagactgatttccagtgcatgtggtataattttccccatcatcaaagctgaaggtgtgaggcatatgttcttccccgccactgtccctgcctattatcgtgctcctcgtccaatggagtaa</cdnaseq>

Protein Sequence

<aaseq>MAEVAAGTGQLIGVAVATLLAAIFLAAALLGSRRRRRRAPLAGK PAAVGGCGVADGEGCGGDGRTDVIVVGAGVAGSALAYTLGKDGRRVHVIERDLTEPDR IVGELLQPGGYLKLIELGLEDCVQEIDAQRVLGYALFKDGKDTKLSYPLEKFHSDVAG RSFHNGRFIQRMRQKAASLPNVQLEQGTVTSLVEEDGTVKGVKYKTKSGEELKAYAPL TIVCDGCFSNLRRALCSPKVDVPSCFVGLVLENCQLPHANHGHVVLANPSPILFYPIS STEVRCLVDVPGQKVPSIANGEMAKYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNR SMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDASALCK YLESFYTLRKPVASTINTLAGALYKVFSASPDQARNEMRQACFDYLSLGGVFSNGPIA LLSGLNPRPLSLVAHFFAVAIYGVGRLMLPLPSPKRMWIGVRLISSACGIIFPIIKAE GVRHMFFPATVPAYYRAPRPME</aaseq>

Gene Sequence

<dnaseqindica>4439..4546#3978..4256#3617..3892#3307..3525#3059..3227#2603..2777#2385..2496#165..419#gtctccgcctgctcctcccaccaccaccaccgctgcttcccttctcccctctcgcccgccgccgcctcgccgcgacgcgcatcggcgccgccccacgaccgcagcagagaagcccaccaccacgcgcggagcggccgaggaggcctcaccactattggtgcgggatggcggaggtcgccgccggcaccgggcagctcattggcgtcgccgtggccacgctcctcgcggcgatcttcctcgccgccgcgcttcttggcagccgccggcgccggcggcgggcgccgttggcagggaagcctgcggccgtgggtggctgcggggtggccgacggcgaagggtgcggcggggatggccggaccgacgtcatcgtcgtcggagccggggtcgccggatctgcgctggcatacacgctcggaaaggtgactccttctcgcctacttagttcgcctacttagatgggttcttcttctttttaaatctgcaaatttgttgcttacgcttcgttgagaacagggtgattcaaaaaaaaaagattgaagaacactgcaagattgaatattttttttccggtaagttaggcgcaaggacgaatttttctatcctgaagcagagtcttaagtacaaattgccaacccctgtttatgcatgcgtcgagctttgatttatttctggaaaggcagctgatgtcttaatccaagaagactagattcgtgtatgaattaattgtgatttcatgcaatttcttgttttgatcaatatttttgcatgttctagcgtgccggtagaaagcgaagtctgttggtctcttccttttttgtggacatgaaatttgtgtggccaataaatgttggtgtgcaaaaaatcgcatgtcttgtaactgtgatgagaaatctctcttttccatctgcagtactccatactggccgtggccggtgaccacaagtcatctggatgcagcagaaaagggacagaaagtgacaaccaagaggagagttaatacatgatttgaataaaaataaaagatgaatctcaggtgttctataaaaccaatacaattttggttatagcaaaacagattttgttgattggtgatgcaaatcttttactgcagtaataacaatataaattaactcaaaccgaaaagtttttctcaaacaagttgtatagagcatgtccaatataattccgactgtatacagtttatcttctagtctggaactactgtaactccattactatatcttttcttatatagaagcaaagagtcacttgtgttcccttctctggttttctattctttatcatgctcctttctatctgcatcaacagagcatttatgtgctctatcttgacacaatggaatgcccaactaaatcaatgacccaatttattttcccaactcccagcaactatgagagtgacaccttcttgatagaaaaactgatactgcttgggcatatcttgagttcttgactttgcgcaaacttaggaggtggtaaaattgagataggtccaggagaaaatgactaactcaccccatgactgcttttgaaatatgagtgagaacactttgtgtgagcgtaaattgtatacacacaaaggatagtgagaacagtggaggcatggttgacaatgtcattagaactaaatgtttgtattaccatcaaccattcaatggaggggatactatacctagcacgtttgttctttgtaaatgatactcccaatgatgattttaacaagggctgttttaattttaaaaaaggtcaaaatatatacatattgaccatagtcaatttacaagtacatttagtgtataaaaattatacaaattggctcgcatttcaacgtgctctcacaaaatgtcggttttatagtttgaagaatatattttatgataaatcaattgctaaagtttaataaacttttcaaaaaaagcatcccctataaaaataatcatcggatgtattatatttttgagtctgcacaaacttccaaaagctgacaatcaatatgcttaaaaacacctaggttgcccattgccatatgaattcactgcatttcaccttaaaattactttcaataatattattttgtattgatatgatcacaatttgcccttgttattcagagacttatcgattaatacatgattttatactgagattctaatgtttgtagttttgtgggttgcgatgttccgttagtcacctagtgcttctgtatttgttaaaagcacctctactgtatcatttttgctctctaataaaaacttattgatattaaggcaattcaatggctcattatgatcaaatgatgaattacagtgaaacaattatccctgagatttctcttatcgctttttttttctttttgtgacttaggatggccgtcgtgtgcatgttatagagagagacctaacagagcctgatagaattgtcggtgaactgttacaacctggtggctacctgaaattgatcgagttgggtctcgagggtaagcttcccccttatctctctatgtatgtgtgtatgtgcacgcgcgcgcgcatatttcttatagtattagtggtacagtggactaaatctttaactatattcagattgtgttcaagaaatagatgctcagcgtgtccttggttacgcgttattcaaagatgggaaagacacaaaactctcctatcccttggagaagttccactcagatgttgctggtaggagctttcacaatggacggtttatacagaggatgcgccagaaagctgcatctttgcctaagtaatagtctttctcgacacaaatttatctttactagaatttttgacatacttatttttatgattttcttgtattgtttgatgtgagcatttcattagtattttagttgcctctagaggattaaaatattagattatgtttaagtgcttattttgctactcgtccagaatgatgtatttcacatgttctttccttctacatgcgccgtatctggatgtatctaattcgtgcacctgcatgtgacatgaggtaaatgtttggcattatgttttatatttcagtgttcaattggagcaaggaactgttacatcattggttgaagaagatggtacagttaagggtgttaaatacaagaccaagtcaggtgaagaattaaaagcatatgcacctctgacaattgtatgcgatggctgtttctcaaaccttcgccgcgccctttgctctccaaaggtacagtttttagattttgcactatccttttttgttcatgcatgtagaagatctaatactgatggaaatatgtggttaggttgatgtaccatcttgttttgttgggctggtcctggagaattgtcaacttcctcatgcaaaccatggccatgttgtcctggccaatccttcacctatcctattttacccaataagcagcactgaagttcgctgtttggttgatgtccctggtcagaaggtgccttccatagcaaacggtgaaatggcaaaatatctcaaaacagtggttgcacctcaggtattattttgctatttcagtcagtcttgtcccgagtttttgcttgcctactcatagcaactaaatgtcaatggaaatgttctgttgacagattcctccagaaatctatgattcattcatagcagccattgataagggaagcataagaacaatgccaaacaggagcatgccggctgctccacatccaacccctggtgcacttttgatgggtgatgcattcaacatgcggcatcctttgactggtggcggaatgactgttgcattatctgacattgttgtgctacgtaatcttctcaagcctctccgcaatctgcatgatgcatctgctctttgcaaataccttgaatcattctatacactgcggaaggttagtcttcactcttcatttcacaatttaccacccacctttcaaaatgtatgctgtctaatgtatggcgctttcatgttcacagccggttgcttctaccataaacacattagctggtgctctatacaaggttttcagtgcctcacctgatcaggctaggaatgagatgcgccaagcctgctttgattacttgagccttggaggtgtcttttcaaatgggcctattgctcttctgtctggtctgaatcctcgaccattgagtttagtggcacatttctttgctgtcgctatctatggtgtcggtcgcctaatgcttcccctcccttcacctaaacgcatgtggatcggcgtaagactgatttccgtgagtatctcaaatcttattcttcaaagttttcaaactttactatttccatcgtggtaccattcatggacagttttctatacaattttttcattccctatcctaaaccctaaacgctaaaccctaaatagacttttttttcccgtttctatactattgctaatccagagttttcactgcagagtgcatgtggtataattttccccatcatcaaagctgaaggtgtgaggcatatgttcttccccgccactgtccctgcctattatcgtgctcctcgtccaatggagtaaggggggaaaatgaaaggagaagcgaagagaaaatccctgccactgtcctgatcggcggatgtttttcgtggatggcaattttcctgtgtaattggtagtagtcgtcaggccgtgaggttgtgtgtgctgttgttctaatggaacgaggggacctgtatacaccgtcacattccctgtacacttgccactttcgttgttccgtcagggatgcatgtcgactgctaatccttaagctgtatatcccccatgaattcatcatgattgcgtctttgctct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0231800, RefSeq:Os03g0231800