Os03g0233000

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Revision as of 12:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0233000| Description = Protein of unknown function DUF607 family protein| Version = NM_001056007.1 GI:115451742 GeneID:4332162| Length = 15...")
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Gene Name

Os03g0233000

Description

Protein of unknown function DUF607 family protein

Version

NM_001056007.1 GI:115451742 GeneID:4332162

Length

1532 bp

Definition

Oryza sativa Japonica Group Os03g0233000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7111097..7112628

Sequence Coding Region

7111243..7111782,7111887..7112399

Expression

GEO Profiles:Os03g0233000

Genome Context

<gbrowseImage1> name=NC_008396:7111097..7112628 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7111097..7112628 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttccgacgaacactagcacgcggcatatgggcggggaagaacgcgaacgccgccgccgcttgtccggcggctgcggctccaaaacctccggcgcggcggccgttgccggcggttgacgactgcccgacgctcgcgtacctgcggcccagaccgggaaccatccggtacaccacggcgtccgttccgcttcccgcccattgcttccccgccctccccgtcggcgaccagctgttcaaccggctccgcctcgacgggctggtcccgcctacgacggccgtgacgcggccaccggaggaggagggggtgggcgtgacggtggaggaggcgaggaaggtggcgcgtgcggcggagatggaggtcgcgcgggcgaggctgaggtccaacgcccagagcgtcgtgtccgggtcggaattcgccgcgctctgcgtcgacattgccggcggcgccgagggaggacgcaggctcgcccgcgcgctcgacgactccggcgtcgtcatcgtcctcggcgacgccgtcttcctccgccccgacatgatagcgaaagcgatcgggagcatgataccggcgacggcacacgcgacgcgagctgcagcaagcgtcgtcgaagtgcggaagaaacgggaggaggaggaggagctgcgggcgatggaggaggagaaggcgggcatcgacgcggcggcggcggcgcaggtgcggcgggagctgtggtgcgggctgggcctcctggcggcgcagacgctggggttcatgcggctcaccttctgggagctctcgtgggacgtcatggagcccgtctgcttctacgtcacgtcgctctacttcatgtccggatacgccttcttcatgcgcacctccacggagccgtccttcgagggcttctaccgcagccgcctcgcgtccaggcagcgacgcctcatgcgggcgcgcagcttcgacgtcgcccggtacgaggcgctgaaggagcaggtgggaggaggagcacggtacggcgtcgcggcgcgcgacgccatcgtgttgaggcagcagcacgtcacgcacgttcattag</cdnaseq>

Protein Sequence

<aaseq>MAFRRTLARGIWAGKNANAAAACPAAAAPKPPARRPLPAVDDCP TLAYLRPRPGTIRYTTASVPLPAHCFPALPVGDQLFNRLRLDGLVPPTTAVTRPPEEE GVGVTVEEARKVARAAEMEVARARLRSNAQSVVSGSEFAALCVDIAGGAEGGRRLARA LDDSGVVIVLGDAVFLRPDMIAKAIGSMIPATAHATRAAASVVEVRKKREEEEELRAM EEEKAGIDAAAAAQVRRELWCGLGLLAAQTLGFMRLTFWELSWDVMEPVCFYVTSLYF MSGYAFFMRTSTEPSFEGFYRSRLASRQRRLMRARSFDVARYEALKEQVGGGARYGVA ARDAIVLRQQHVTHVH</aaseq>

Gene Sequence

<dnaseqindica>147..686#791..1303#gtcaaaatcgtgtcgattcatcggccaactccaaaccaaccaaccagcagttgccgccatctctcatctctgtcacgtaacacgagtacgtacacaacacaaaatctgcaaaatattttggttgcctgctcggagaggcgaagaaaatggcgttccgacgaacactagcacgcggcatatgggcggggaagaacgcgaacgccgccgccgcttgtccggcggctgcggctccaaaacctccggcgcggcggccgttgccggcggttgacgactgcccgacgctcgcgtacctgcggcccagaccgggaaccatccggtacaccacggcgtccgttccgcttcccgcccattgcttccccgccctccccgtcggcgaccagctgttcaaccggctccgcctcgacgggctggtcccgcctacgacggccgtgacgcggccaccggaggaggagggggtgggcgtgacggtggaggaggcgaggaaggtggcgcgtgcggcggagatggaggtcgcgcgggcgaggctgaggtccaacgcccagagcgtcgtgtccgggtcggaattcgccgcgctctgcgtcgacattgccggcggcgccgagggaggacgcaggctcgcccgcgcgctcgacgactccggcgtcgtcatcgtcctcggcgacgccgtcttcctccgccccgacatggtacgtacgtctttcgttacgcactcacgaaacacaaacacacaatccatgatcgaacacctgcaaattacgtcccacactaacgtgtctccgttgtcgtgcagatagcgaaagcgatcgggagcatgataccggcgacggcacacgcgacgcgagctgcagcaagcgtcgtcgaagtgcggaagaaacgggaggaggaggaggagctgcgggcgatggaggaggagaaggcgggcatcgacgcggcggcggcggcgcaggtgcggcgggagctgtggtgcgggctgggcctcctggcggcgcagacgctggggttcatgcggctcaccttctgggagctctcgtgggacgtcatggagcccgtctgcttctacgtcacgtcgctctacttcatgtccggatacgccttcttcatgcgcacctccacggagccgtccttcgagggcttctaccgcagccgcctcgcgtccaggcagcgacgcctcatgcgggcgcgcagcttcgacgtcgcccggtacgaggcgctgaaggagcaggtgggaggaggagcacggtacggcgtcgcggcgcgcgacgccatcgtgttgaggcagcagcacgtcacgcacgttcattagcagcagcagcagggtgtttttttttttttggtgtggctaattaggtgtgacgtcgagcgcgtgcgtagttgccagctaggagtagtacagtaatactgtactccacgtagtttgagacgtggacgatccgggactcgggtgagtccatgatgtccagctgtaccagcagccatttattcggtcagaaatctgaaaaattggttgaatcactaagtaaaattttttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0233000, RefSeq:Os03g0233000