Os10g0180000

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Revision as of 08:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0180000| Description = NpGUT1 homolog| Version = NM_001070783.1 GI:115481309 GeneID:4348204| Length = 3436 bp| Definition = Oryza sativa J...")
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Gene Name

Os10g0180000

Description

NpGUT1 homolog

Version

NM_001070783.1 GI:115481309 GeneID:4348204

Length

3436 bp

Definition

Oryza sativa Japonica Group Os10g0180000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5167605..5171040

Sequence Coding Region

5167948..5168461,5168764..5169005,5169612..5169976,5170762..5170894

Expression

GEO Profiles:Os10g0180000

Genome Context

<gbrowseImage1> name=NC_008403:5167605..5171040 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5167605..5171040 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggacgaggaggaggagtgcgcgagcgcgagcgcggccgccgctggccatgccgctcgccgtgcttcttctcttcgcctgttcttccggcgtcgcagccgcggccgctcagggcatcgagcggatcaaagacgatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatgtttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatggggccatcccctgaccaccaagtctccacgcatgatgagaagtgcgatcaagttcatctccaagtactggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgactttgcagcgtgcttctacttccaggaggcgaaggctattgagcgaggcatccttccggtgctgcgccgtgctacgctggtgcagacgtttgggcagaagaaccatgcgtgtctcaaggatggctccatcacagtcccgccgtatactcctgctcacaagatcagagctcatcttgttccaccagagactcctcggtcaatctttgtctacttccgtggtttgttctatgatacttcgaatgatcctgagggtggttactatgcaaggggcgcccgtgcatcggtgtgggagaacttcaagaacaacccgatgttcgacatctctacggaccacccccaaacctactacgaggacatgcagcgtgcagtcttctgcctgtgcccgctgggctgggcgccatggagccctcgtctggtggaggccgtggtgttcggctgcatcccggtgatcatcgcagacgacatcgtcctccccttctccgacgcgatcccgtgggaggagatcgccgtgttcgtggccgaggacgatgtcccgcagctggacaccatcctgacctccataccaacggaggtgatcctccggaagcaggcgatgctcgcggagccgtcgatgaagcagaccatgctgttcccgcagcctgcggagcccggggatggcttccaccaggtgatgaacgcgctggcgaggaagctgccccatggcagggatgtgttcctcaagcccgggcagaaggtgctcaactggaccgaggggacccgggaagacctgaagccgtggtag</cdnaseq>

Protein Sequence

<aaseq>MGTRRRSARARARPPLAMPLAVLLLFACSSGVAAAAAQGIERIK DDPVGKLKVYVYELPPKYNKNIVAKDSRCLSHMFATEIFMHRFLLSSAIRTSNPDEAD WFYTPVYTTCDLTPWGHPLTTKSPRMMRSAIKFISKYWPYWNRTEGADHFFVVPHDFA ACFYFQEAKAIERGILPVLRRATLVQTFGQKNHACLKDGSITVPPYTPAHKIRAHLVP PETPRSIFVYFRGLFYDTSNDPEGGYYARGARASVWENFKNNPMFDISTDHPQTYYED MQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFSDAIPWEEIAVFVAEDD VPQLDTILTSIPTEVILRKQAMLAEPSMKQTMLFPQPAEPGDGFHQVMNALARKLPHG RDVFLKPGQKVLNWTEGTREDLKPW</aaseq>

Gene Sequence

<dnaseqindica>2580..3093#2036..2277#1065..1429#147..279#attctgaattctcccatgccttctcctggtaaagaataatcccaccacctccctcctctactacctctccctccccccaaactcgagcctccatctccctccccgatccagacaccgatcgaggcgttgacgacgacgtctagctcatggggacgaggaggaggagtgcgcgagcgcgagcgcggccgccgctggccatgccgctcgccgtgcttcttctcttcgcctgttcttccggcgtcgcagccgcggccgctcagggcatcgagcggatcaaaggtatgtgcgtctgttgctccggtaatccaattaattacgcgccgtcggttgttgcatagatctgaggaatcacacgcgtgctatgcccctcgtcgcgtttttggtggccggaatttgattcggtcgagtgctctctgctatgctatcgcactgaacagagtgctccaaaatcttgagatcgaatctatttatttcatctatgtgatgcgtcgtcaatcgattatattatatatataatcctgacttgaatatgctgagcagctgaccataaatgaagtttgattaattcttttccatgtagcaagacttctatgctatcgtagctgttccattactttttctttgcctgctttctcgctactccctcggccacaaaaattagataatctttgcttacttattgatccaaaaacaagttcatcattaattattggtccaaaaacaagttcatcattaagtaatcattttattagaatttgtgaaagtagtgaacagatgtattcgaagtagataaaatagcatacaactttattaggatttgataaaatggagggtattctagtcttttcttttatatctattggtatgtgtgggatggccggattgtttaaaaatggagttattttgggatggatgaagtgctagtatagcttcaataattatgctttgactgaagaattaaaaagaacactttcagcaatgttttaactccatttatattaactttccttgctcgcggatatgattaaaattcacgaagtgctgctggtgatgtgctagagaagacgatcctgttggaaagctgaaggtgtatgtctacgagctgccccccaagtacaacaagaacattgtggcgaaagattccagatgcctcagccacatgtttgccacagagatcttcatgcatcgcttcctgctgtcgagtgcgatccggacttcgaatccggacgaagccgattggttctacactccagtgtacaccacatgcgacctcacgccatggggccatcccctgaccaccaagtctccacgcatgatgagaagtgcgatcaagttcatctccaagtactggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgactttgcagcgtgcttctacttccaggtgagtcatgtacaaggttcggattcggaaaattttcagtaattttgaactccattgagaagaaattatttagactgcaaactttagttttttgtggattagcaaaatttgtgttaactcggtcaaaatttgttcaatcttcaaattgtatgggccttggtcatacatagtgccataaaccatgaatcatcctctcctatacactccctccatttgaaaaatataagtatttttaattcaaaatgcgtagttctaaggcgataatttcaatgtgcgggaatccatgtattttcagccaatcagatgcttgggataggaatttaagcaattcaaaatttgaaatttgactaataaaatgactaaaaacagaagttttccgttaaccttgatctttgctagacaatcagcaaatgctcatattttataacggagagagagtgtattattacccatgtaacgtggaatatgcaaactcatagaatggaaattcatcctagtaacgaagccacacacaacacctgttatttatcccttactcatgtttattcgcttctagcatcatgtacatccaacgtgcattcagatcaacatgttcctacttttcaggaggcgaaggctattgagcgaggcatccttccggtgctgcgccgtgctacgctggtgcagacgtttgggcagaagaaccatgcgtgtctcaaggatggctccatcacagtcccgccgtatactcctgctcacaagatcagagctcatcttgttccaccagagactcctcggtcaatctttgtctacttccgtggtttgttctatgatacttcgaatgatcctgagggtggttactatgcaaggtatgcacctaattaaattatgcagctgaaaagctgtaggtcttaatcaatcattgattagaaagtcttgatacacctaccattaggttctatattgtgtaaagcctaagggaattgatggatctgaagtagcagaaattcaggaatatttttgccctccaaattttgaaattacatgataacaaaatttgaataaattttgcaaaattaaaaaaaaaaagttgctgggtgaggggaagggtggcaaggtggttgaaatttcataccaaaatgttgaatcctgcctaacatatgcaatgcaggggcgcccgtgcatcggtgtgggagaacttcaagaacaacccgatgttcgacatctctacggaccacccccaaacctactacgaggacatgcagcgtgcagtcttctgcctgtgcccgctgggctgggcgccatggagccctcgtctggtggaggccgtggtgttcggctgcatcccggtgatcatcgcagacgacatcgtcctccccttctccgacgcgatcccgtgggaggagatcgccgtgttcgtggccgaggacgatgtcccgcagctggacaccatcctgacctccataccaacggaggtgatcctccggaagcaggcgatgctcgcggagccgtcgatgaagcagaccatgctgttcccgcagcctgcggagcccggggatggcttccaccaggtgatgaacgcgctggcgaggaagctgccccatggcagggatgtgttcctcaagcccgggcagaaggtgctcaactggaccgaggggacccgggaagacctgaagccgtggtagatagatatatacagtatatgatagtgttatggcaccattgccattcaccatggctggtgttcttgtgtaaatgacaccaccggatgagaagctgatcaatgaggatatattgatgatgatgagcgaaccacaccattgaatgtaaagctccctttccttgcttctttttaaggccatgtgcctgtatggcaatgtctgttttgaccattgttgtagtgttagcgtattacaggtcatggattatgtaatactagtcaataacccatacgttacaccgtgcaacttgcacaggctatttgttcatatatatataaaacataaatagtaaaattttgtcataggc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0180000, RefSeq:Os10g0180000