Os03g0238800

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Revision as of 12:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0238800| Description = Conserved hypothetical protein| Version = NM_001056037.1 GI:115451802 GeneID:4332197| Length = 4794 bp| Definition ...")
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Gene Name

Os03g0238800

Description

Conserved hypothetical protein

Version

NM_001056037.1 GI:115451802 GeneID:4332197

Length

4794 bp

Definition

Oryza sativa Japonica Group Os03g0238800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7379347..7384140

Sequence Coding Region

7379347..7379841,7380328..7380479,7380556..7380668,7380757..7380867,7381313..7381430
,7381539..7381642,7382403..7382498,7383639..7384140

Expression

GEO Profiles:Os03g0238800

Genome Context

<gbrowseImage1> name=NC_008396:7379347..7384140 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7379347..7384140 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccgccgccgtcatcccgtcgtccgcgcccggcgccgccgccgcaggtgcggccgcggttgagagcgctgggtgggtggtggacgagcgggacggcttcatttcatggctgcgcggagagttcgcggcggccaacgccatcatcgacctgctgctgctccacctccgctccgtcggcgagcccggggagttcgagcacgtcgccgccgcggtgcagcagcggcgccaccactgggcgcccgtgatccacatgcagcagttcttccccgtcggcgacgtcgcgtacgcgctccagcaggccgggtggcgccgccgcgcgccgccgcaccaccagcagcagggccccggcgcctcgccgtccccgccgccccctcccccgcgcggccgcccctcgttctcggcgtcccactcgcaccatcgccacggtggtcaccatcatcgctccgattcggtgcgcggcggcggcactggtgcgacggctggatccgataaagatggacgtgaagttcataacaaggaagagaaaggaatgaaggaagcagagaatgtggttgaagctaaaagctcacagttggagtctcttgtttctcatgaaggtgaaaaaactcctaggccgcaagctgttgctgaaggaagcagtaaagtggttccaactcctgtggagtatacggtcaatgacattattgatggcaagacggttaatgctgttgaagggcttaaggtttatgaagggttggtaaatgagaatgagaaaaacaagattctctctttacttaatgaaacaaaagcttcttttcgtcgaggagggcttgaagctgggcagactgtaataattggaaaaagaccaatgaagggtcatgggagggaaattattcagctgggcattcctatcgttgaaggccctcctgaagatgactatccaagagagacaaaagtggaggctgttcctggattgctgcatgatctgtttgaccgcttgtgtcagaaggaaattataccaacaaaaccagattattgtgttattgattactacaatgagggggattattctcaccctcaccaatcccctccttggtatggtagacccttttgtacattctgcctgacagattgtgatatggtgttcggccgagttatttcaggagaacgaggtgatcatagaggtcctctgaagctctctctctcgacagggtctcttctggtgttgcatgggaagagtgctgatgttgctaagcgagctattcctgctgcatgtaagcagcggatcctactaagcttcgggaagtctttatcgagaaaacaagtaccatctgaaagtgtttcacggtttactaccccgttgacaccacctcctatgccctggggtcctccaaggccggctaacatggcgcgtcattcttcaagccctaaacactttggatatgccccaaacagtggcgtacttccagcgccggccattggagcgcatcacattcctccatcagatggaatgcagccactctttgtagcacctgctccagttgctgctgcagccatgcctttcccatcacctgttcctttgccaaactcaacaacagcttggatggcagaagctgctccaaggtctgctccacaacgactcccagttcctggcacgggggtcttccttcctcctggatcgggtcacgcactgcctcatcagatgat</cdnaseq>

Protein Sequence

<aaseq>MASAAVIPSSAPGAAAAGAAAVESAGWVVDERDGFISWLRGEFA AANAIIDLLLLHLRSVGEPGEFEHVAAAVQQRRHHWAPVIHMQQFFPVGDVAYALQQA GWRRRAPPHHQQQGPGASPSPPPPPPRGRPSFSASHSHHRHGGHHHRSDSVRGGGTGA TAGSDKDGREVHNKEEKGMKEAENVVEAKSSQLESLVSHEGEKTPRPQAVAEGSSKVV PTPVEYTVNDIIDGKTVNAVEGLKVYEGLVNENEKNKILSLLNETKASFRRGGLEAGQ TVIIGKRPMKGHGREIIQLGIPIVEGPPEDDYPRETKVEAVPGLLHDLFDRLCQKEII PTKPDYCVIDYYNEGDYSHPHQSPPWYGRPFCTFCLTDCDMVFGRVISGERGDHRGPL KLSLSTGSLLVLHGKSADVAKRAIPAACKQRILLSFGKSLSRKQVPSESVSRFTTPLT PPPMPWGPPRPANMARHSSSPKHFGYAPNSGVLPAPAIGAHHIPPSDGMQPLFVAPAP VAAAAMPFPSPVPLPNSTTAWMAEAAPRSAPQRLPVPGTGVFLPPGSGHALPHQM</aaseq>

Gene Sequence

<dnaseqindica>4300..4794#3662..3813#3473..3585#3274..3384#2711..2828#2499..2602#1643..1738#1..502#atggcctccgccgccgtcatcccgtcgtccgcgcccggcgccgccgccgcaggtgcggccgcggttgagagcgctgggtgggtggtggacgagcgggacggcttcatttcatggctgcgcggagagttcgcggcggccaacgccatcatcgacctgctgctgctccacctccgctccgtcggcgagcccggggagttcgagcacgtcgccgccgcggtgcagcagcggcgccaccactgggcgcccgtgatccacatgcagcagttcttccccgtcggcgacgtcgcgtacgcgctccagcaggccgggtggcgccgccgcgcgccgccgcaccaccagcagcagggccccggcgcctcgccgtccccgccgccccctcccccgcgcggccgcccctcgttctcggcgtcccactcgcaccatcgccacggtggtcaccatcatcgctccgattcggtgcgcggcggcggcactggtgcgacggctggatccgataaagatggtgagtcgagatctcttggtgtgatagcattgatcttctttcaattgtttgtttggtactagtgtattttgttgtgggaaaggcggatgcttttttacttctttctgatcacttgggccccaaaatggtccgatccatggaatgcatttgtggtgttgagttgcttgtttactactactcccaattgactagccacaggagctttttttcatcagataatatctgctgtcgaaaagtgctaattttgctatgcttaaaaagtgctaagtcttgtcgctgttttctggcattcgtgtttgtaattagtatattgagctctaaaatgacaagcttttatctttttgtcgtgtaattctatatatattgctaaaccatggaggttctaaagataccagcaatgctacccgaaaatagctttcccatgtagtattataggcacatgcaaagattgttttgagttgcttcatgtggaaacggttttgctcagtgcattaagagatacccttttctttctgcttataaaaatgtttttttacctgtaatttatttgagttggaactggctcaggtaaagggggccattctcttagtttcaaatttaccctgtaaatctctcaaagaaggtacatgttccatgtgctctgctcttcatgtgccctgtgaagttgtcatcctcgaactctgccaggccaaatacggaaaacccagagatggcgtacagcatgatcgtgctcacccatgtacgactacgaaagtttttactgccaacttcttgtacttctgaggtgctttggttcataaaccactgggtttgttgaacacctgtggttggtttgagagcaatcagcttaggtagcaagaacaatcagtgatggcagaggttgttgttccatttttgttcctagggaagctttgttgtcttcatcgtagtttggaacacaccatctaggagaaacccaaagggtggaagatacaatcactgtctaatcggccttgcatacttttaggtgtggacccacctgaccctttacgtttgcccgtaggatttccatgcaagcatctgtagagttagaaattgcaatgcaaatgcttgaacaagtagttttcacattgtttctcatgtattcttgactgctcctaggacgtgaagttcataacaaggaagagaaaggaatgaaggaagcagagaatgtggttgaagctaaaagctcacagttggagtctcttgtttctcatggtacacaagcacttactcatgtatctgtgcttaatattgttcaaattttttaatgctaaattgtggtgttgccattctcctgattaatgtttctagttacctccttttgtaacatttgagttctgctaaagtcaatttatgttctgttgctttatgtccccataactatgttgttttttcaatagttctctagattcttgtagaacataggacagacccttagtttggaaaagaattgtctaaaaaagacagcaataaattgcaacccacaatgcttggatttctaccctgtcagcaaaaattcgaatttattttactattgtgtgttattttttttgaaaaatgatggtgaagcaatctcaatctgaagatgactttcattagttttcttaagtggctatctccacctcaaatttagtccaactatgtcaatgacttggtcacatttggaatattttgaaattgttcataaaattgttagaccacattacttacaaccttaattttatagcgtgaggatgcaatactggtaaaataggatcaggaattttggcccttttctttttttctagactgacaaaagctaggaaactgtttccactttccagcttgttgatacattgtcgaatatttatacaggcagaatagtacatttattgctggctgctatactttttgttcttgcttctgatagtttccatatagtgatgcaataattttttatcatttcttaacatcttattgtccttgcatcatgtagaaggtgaaaaaactcctaggccgcaagctgttgctgaaggaagcagtaaagtggttccaactcctgtggagtatacggtcaatgacattattgatggcaagacggtctgttttacctagatcagaaattctagtgctgtattcgcatctccttttcaactagcttctcttgaatctcgaagatttgatgaaatatgctttatgcttctttaggttaatgctgttgaagggcttaaggtttatgaagggttggtaaatgagaatgagaaaaacaagattctctctttacttaatgaaacaaaagcttcttttcgtcgaggagggcttgaaggtagacttaccttcttttttttgggtgaaataaccatgaacagctattcatttgtgtgctaatgtgttcactgtgcaccacgtggttgtgcactaagattccagttttgcaaaatctgtttccatatctgtatataaaaaagtgtaccatgagtccatcaaagattatttgtctgagaaacagccttttcttatgcttagttgatcaactagaaaatcattgacagttacttttgcggctccttttggatatgtgtctgacacttatgttagtacatggttaatttgaccctttttctctagtttgtgttcagcatctatgtcaactatgacgctgaacacaaactgacacagatgctgagcacaaactagagaaaaagggtcatattaaccatgtaacattttgggatcttgtcacttcactatgattttttttggtaaaacagctgggcagactgtaataattggaaaaagaccaatgaagggtcatgggagggaaattattcagctgggcattcctatcgttgaaggccctcctgaagatgactatccaagaggtagatctagtcttcagtgtagtgtctcatgcttgtgttcatattttttttataacttccctatctgcgttcatattcaaaattttagagacaaaagtggaggctgttcctggattgctgcatgatctgtttgaccgcttgtgtcagaaggaaattataccaacaaaaccagattattgtgttattgattactacaatgaggtatcttgctttcatagcatttactgtttttgcttaacatggattctgaccaggatcaaatgatttttttccccagggggattattctcaccctcaccaatcccctccttggtatggtagacccttttgtacattctgcctgacagattgtgatatggtgttcggccgagttatttcaggagaacgaggtgatcatagaggtcctctgaagctctctctctcgacagggtaaaactttctccagtaccttttgtcctctgttacgtgttaagtgtgcacagtaagcttaacggttggaatcccttgcttgattattgatgttttcttgaaaaatctttaatacttgtggtttggtatacacacacacacacgtatgtatgtgtgatgaatattttagatgtcaacactttcatttttatttacttactacataatcgtgtggattagtcccctataagaatatcataatgaccatgtttacccctcttatgtagcaatatgcccatataataaggatataagcatggtggttcccctttgtattactcaaaattttacaccccgttagtatttaaatgtgtaagatgctttcatttttcactaaaagcactgtaattcaatactgtatttaagatgcattacaatatggagtatcatttttcactaaaagcaccgtataattttcatgctcttttcttttcctctcgactacaggtctcttctggtgttgcatgggaagagtgctgatgttgctaagcgagctattcctgctgcatgtaagcagcggatcctactaagcttcgggaagtctttatcgagaaaacaagtaccatctgaaagtgtttcacggtttactaccccgttgacaccacctcctatgccctggggtcctccaaggccggctaacatggcgcgtcattcttcaagccctaaacactttggatatgccccaaacagtggcgtacttccagcgccggccattggagcgcatcacattcctccatcagatggaatgcagccactctttgtagcacctgctccagttgctgctgcagccatgcctttcccatcacctgttcctttgccaaactcaacaacagcttggatggcagaagctgctccaaggtctgctccacaacgactcccagttcctggcacgggggtcttccttcctcctggatcgggtcacgcactgcctcatcagatgat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0238800, RefSeq:Os03g0238800