Os03g0240400

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Revision as of 12:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0240400| Description = Conserved hypothetical protein| Version = NM_001056042.1 GI:115451812 GeneID:4332202| Length = 2937 bp| Definition ...")
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Gene Name

Os03g0240400

Description

Conserved hypothetical protein

Version

NM_001056042.1 GI:115451812 GeneID:4332202

Length

2937 bp

Definition

Oryza sativa Japonica Group Os03g0240400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7479984..7482920

Sequence Coding Region

7479984..7482770

Expression

GEO Profiles:Os03g0240400

Genome Context

<gbrowseImage1> name=NC_008396:7479984..7482920 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7479984..7482920 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>accgaggcaccgcccaaaaccttccccatcttcctcccgcgccgccgtcgccgccgcttcctccccaactccccacagaagacctcccggactcactcgcctgcatcccttcgaagcgctgcgcgcgcgcggccgtgtccgccggcgccgccggcaatgaacctctcggacgactggcgcttcctcttccccgtctcctccgtcttcgcgccgccgtccctcgccacgtcctccgccgccgccgcatcatacgggcccctcctcttctccccgctcccgccgcacgccacgctcctcgccctcccttcccccttccagccgccgcacccctcccggcgcggcctccgccacctcctccgccacttcgtccgctccacctccttcctccccttcgccgacctcgaccccctctcgggggcgctgctcaccgcgccgtccccgcccttcccggcgccctccaacctgctcgccgtcctccgcgccccctcctcctcgcggtccctcgtcgtcttcttcccttccggcgagaacgcggagcaggtctcctacgttaccctcgaccccgtcgccgaccccaccacgccgctctcccactccgtgcagagcgatgggttcatgcaccccaggcaccgcatccagcagcttgccaccacggcgtcctggtcctcgtggccgtcgcggtcacgcgacagctctatcgaggggtttcttcttgctgcgacgttgtactcggtgaattggttcaaggttgagtcgcggggttctggctcccccgcgctcgtgcccgcggccaagcaggcgttcgacgctgctgttgtgcacgcgtgctggagcaagcatttgcagtcggagtgtgtagtgctgctggaaaatgggcagctgtgctggttcgatctggatacacggcgtggaggcaagatgaaggttggttttggcagcaaggatgacctgggggactggctaagctgcgagtacggggcgcaaccgtggacagtgatcgttgcgagcacggcggccatccttttggttgatatgagatttggggatcatggtgaatacaaggttttagcaagagttgggatggaagggttgtttgaaactgatccttttgtcaagactcaatgttaccttgcattctgcaaggctccgtttgatgattttcttatatcggtggtgacagagcgtcacctgatggtctttgatatcagacggcctttgatacccgtgttggcttggcagcatgggcttgataacccaaatcatattgctatgtttcgattatctgaactgaggccttctaaggagcatgagtgggcatcaaattcaggctttgccattctggttggttcactatggagcactgaatttaatctattcttttgtggccctaaggagcaagacgctacagaaaatgctcccctatatgcttgggatcttccatcacggatttctttgataggtcagcactgcagctgcagcattggacttatggaagaggtgttcaagggggtcgttccaggacatggctctgcatctcaactaattaggaactacatcattggttaccacgtgcttccgaacacaatgttggagtcatcattcactggctttgctttgatccgtttaacatcatcggggaagttagagatgcaaaggttccgtgcctctggagatttacatgatgatgccatttgtgatgaatcacaacataagtctgtgggttctagctcatccatttctcttgacactcacggagaaaatttttctgaaagatatgagtttctgaagttgcattacctatctaaatttctgaagggcaatctgcgcagctcattggagaatcatgattctgatgtcaacaaacgttcccgccatattattattagtgaagatgtatcagtatttgcaaaggataactctgcgtcttgttctcagtcagtttcagatttcctatgcaatgctagtgcgcccatgaacattttcgaaattgcatgtcaaagcatattgagcagactatcttcagatatccttcttgttgccttctccaaatacaaggacatgcttgcaagcaccaataaaaagcgcatatatgaatatctggaagttcctgcatgtttcccaaatagtaataaacttcggccttacctgttggcaaaatcttcaagcattagttggaatctgacgagcaaagcaaaatctggaaattctcttgttggtccagtactccccatacctgttctgctcgcgatggaagatagcaacaagggtatagacagcccttctcgggaagattccagctcagtaagccatcggtgcagagaagttattgaagcctttgttcctgaaatatcaattgctaatacagataactgtaatggatggtctgcttcacaagaggtgaaagatgataaaccatattttgtttatgagcctcagactgataggcccactcttgatgaggctgctagaaagaaggataaacaaacacagaagctagatgacccttcatgtttgcatgctcctacagcaccacctatggatgaaaactttatgacatttgtttgtggaagagctggaattcctcattctggacctgagcaagctgcatccaatttgtttgatttcagcccagtgaggatgaaatttgagtctccagctatagacatacagcctgctgaggaaaaagtatataaatgcttgaagaagcaatttttagcatggcaaaacgatttcaagccataccaagacttttgtaactcatatcaaatacaaaagccaccgcagtag</cdnaseq>

Protein Sequence

<aaseq>TEAPPKTFPIFLPRRRRRRFLPNSPQKTSRTHSPASLRSAARAR PCPPAPPAMNLSDDWRFLFPVSSVFAPPSLATSSAAAASYGPLLFSPLPPHATLLALP SPFQPPHPSRRGLRHLLRHFVRSTSFLPFADLDPLSGALLTAPSPPFPAPSNLLAVLR APSSSRSLVVFFPSGENAEQVSYVTLDPVADPTTPLSHSVQSDGFMHPRHRIQQLATT ASWSSWPSRSRDSSIEGFLLAATLYSVNWFKVESRGSGSPALVPAAKQAFDAAVVHAC WSKHLQSECVVLLENGQLCWFDLDTRRGGKMKVGFGSKDDLGDWLSCEYGAQPWTVIV ASTAAILLVDMRFGDHGEYKVLARVGMEGLFETDPFVKTQCYLAFCKAPFDDFLISVV TERHLMVFDIRRPLIPVLAWQHGLDNPNHIAMFRLSELRPSKEHEWASNSGFAILVGS LWSTEFNLFFCGPKEQDATENAPLYAWDLPSRISLIGQHCSCSIGLMEEVFKGVVPGH GSASQLIRNYIIGYHVLPNTMLESSFTGFALIRLTSSGKLEMQRFRASGDLHDDAICD ESQHKSVGSSSSISLDTHGENFSERYEFLKLHYLSKFLKGNLRSSLENHDSDVNKRSR HIIISEDVSVFAKDNSASCSQSVSDFLCNASAPMNIFEIACQSILSRLSSDILLVAFS KYKDMLASTNKKRIYEYLEVPACFPNSNKLRPYLLAKSSSISWNLTSKAKSGNSLVGP VLPIPVLLAMEDSNKGIDSPSREDSSSVSHRCREVIEAFVPEISIANTDNCNGWSASQ EVKDDKPYFVYEPQTDRPTLDEAARKKDKQTQKLDDPSCLHAPTAPPMDENFMTFVCG RAGIPHSGPEQAASNLFDFSPVRMKFESPAIDIQPAEEKVYKCLKKQFLAWQNDFKPY QDFCNSYQIQKPPQ</aaseq>

Gene Sequence

<dnaseqindica>1..2787#accgaggcaccgcccaaaaccttccccatcttcctcccgcgccgccgtcgccgccgcttcctccccaactccccacagaagacctcccggactcactcgcctgcatcccttcgaagcgctgcgcgcgcgcggccgtgtccgccggcgccgccggcaatgaacctctcggacgactggcgcttcctcttccccgtctcctccgtcttcgcgccgccgtccctcgccacgtcctccgccgccgccgcatcatacgggcccctcctcttctccccgctcccgccgcacgccacgctcctcgccctcccttcccccttccagccgccgcacccctcccggcgcggcctccgccacctcctccgccacttcgtccgctccacctccttcctccccttcgccgacctcgaccccctctcgggggcgctgctcaccgcgccgtccccgcccttcccggcgccctccaacctgctcgccgtcctccgcgccccctcctcctcgcggtccctcgtcgtcttcttcccttccggcgagaacgcggagcaggtctcctacgttaccctcgaccccgtcgccgaccccaccacgccgctctcccactccgtgcagagcgatgggttcatgcaccccaggcaccgcatccagcagcttgccaccacggcgtcctggtcctcgtggccgtcgcggtcacgcgacagctctatcgaggggtttcttcttgctgcgacgttgtactcggtgaattggttcaaggttgagtcgcggggttctggctcccccgcgctcgtgcccgcggccaagcaggcgttcgacgctgctgttgtgcacgcgtgctggagcaagcatttgcagtcggagtgtgtagtgctgctggaaaatgggcagctgtgctggttcgatctggatacacggcgtggaggcaagatgaaggttggttttggcagcaaggatgacctgggggactggctaagctgcgagtacggggcgcaaccgtggacagtgatcgttgcgagcacggcggccatccttttggttgatatgagatttggggatcatggtgaatacaaggttttagcaagagttgggatggaagggttgtttgaaactgatccttttgtcaagactcaatgttaccttgcattctgcaaggctccgtttgatgattttcttatatcggtggtgacagagcgtcacctgatggtctttgatatcagacggcctttgatacccgtgttggcttggcagcatgggcttgataacccaaatcatattgctatgtttcgattatctgaactgaggccttctaaggagcatgagtgggcatcaaattcaggctttgccattctggttggttcactatggagcactgaatttaatctattcttttgtggccctaaggagcaagacgctacagaaaatgctcccctatatgcttgggatcttccatcacggatttctttgataggtcagcactgcagctgcagcattggacttatggaagaggtgttcaagggggtcgttccaggacatggctctgcatctcaactaattaggaactacatcattggttaccacgtgcttccgaacacaatgttggagtcatcattcactggctttgctttgatccgtttaacatcatcggggaagttagagatgcaaaggttccgtgcctctggagatttacatgatgatgccatttgtgatgaatcacaacataagtctgtgggttctagctcatccatttctcttgacactcacggagaaaatttttctgaaagatatgagtttctgaagttgcattacctatctaaatttctgaagggcaatctgcgcagctcattggagaatcatgattctgatgtcaacaaacgttcccgccatattattattagtgaagatgtatcagtatttgcaaaggataactctgcgtcttgttctcagtcagtttcagatttcctatgcaatgctagtgcgcccatgaacattttcgaaattgcatgtcaaagcatattgagcagactatcttcagatatccttcttgttgccttctccaaatacaaggacatgcttgcaagcaccaataaaaagcgcatatatgaatatctggaagttcctgcatgtttcccaaatagtaataaacttcggccttacctgttggcaaaatcttcaagcattagttggaatctgacgagcaaagcaaaatctggaaattctcttgttggtccagtactccccatacctgttctgctcgcgatggaagatagcaacaagggtatagacagcccttctcgggaagattccagctcagtaagccatcggtgcagagaagttattgaagcctttgttcctgaaatatcaattgctaatacagataactgtaatggatggtctgcttcacaagaggtgaaagatgataaaccatattttgtttatgagcctcagactgataggcccactcttgatgaggctgctagaaagaaggataaacaaacacagaagctagatgacccttcatgtttgcatgctcctacagcaccacctatggatgaaaactttatgacatttgtttgtggaagagctggaattcctcattctggacctgagcaagctgcatccaatttgtttgatttcagcccagtgaggatgaaatttgagtctccagctatagacatacagcctgctgaggaaaaagtatataaatgcttgaagaagcaatttttagcatggcaaaacgatttcaagccataccaagacttttgtaactcatatcaaatacaaaagccaccgcagtaggcctttgcttatgctgatacttgtaatattgcattagaaagacttgggtttcgggaaagtatttctttcctgatctggagtatgcccctatatttgcatattatcattttgggtatttggatcaggtaggatgaacccacttgacttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0240400, RefSeq:Os03g0240400