Os03g0240900

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Revision as of 12:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0240900| Description = Conserved hypothetical protein| Version = NM_001056047.1 GI:115451822 GeneID:4332207| Length = 4029 bp| Definition ...")
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Gene Name

Os03g0240900

Description

Conserved hypothetical protein

Version

NM_001056047.1 GI:115451822 GeneID:4332207

Length

4029 bp

Definition

Oryza sativa Japonica Group Os03g0240900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7503056..7507084

Sequence Coding Region

7503250..7503698,7504104..7504223,7504312..7504554,7504965..7505217,7505361..7505711
,7506261..7506340,7506440..7506485,7506588..7506689,7506804..7506875

Expression

GEO Profiles:Os03g0240900

Genome Context

<gbrowseImage1> name=NC_008396:7503056..7507084 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7503056..7507084 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggaggcggtgacggtgcaggtcggcggcttcgccaactacgtcggctcccacttctggaacttccaggatgagttgctcgggctcgccgacgaccccgacgccgacccagtcttcaagaacgacgcgctggacatggacgtcctctaccgctccggcgagacgcaccagggtatacccacatactgccctcgtctggtgtcggttggttctcgagggtcccttggttctttgagttcatctggtaatctcggtcagaccagtgcttctgcagatcagctcaatgttgctacatggtctggaagtgtaacaagatcagtctcaaaacctcatgggcggaacttgtttctgcaaagcttagttgaagaagggcagaatccaagcactagcaatggtgccagcaactcccagaaaagtgttgaggataaggacctgatcgactgtctagagaatagcgtcaacttttggacggattattcaaaagttcagtatcatcctcagagtttatatgagttacatgggtcatggacagactttgacaagtttgataactatggcagcgcacaagaggttgtttcagactggtcgcaaatagaggaaatgaatgagaggctaaggttctttgttgaagaatgcgaccatattcagggcatccagtttattgtggatgattcaggaggtttttccagtgtagctgcacagtttttggagaacattgctgatgattacacaaatacacctgtattgctttactgtgtgagggatccaatgacccttggatcatccaggaggaatcaaagggagtccattatgagagctcttcatgatgctgtttcattttcaaaactttcgtccttttgcaacctgatggtacccataggaccgccttcattaagtagaagttacatgtcatcgtatctttatatacaagacgagaaaccattccatgctagtgctgtttgtgctgcagcaatacattcaattactgttccatttagattgcaacgaacgggcccgagttcagacttggcacattcatctggtaatcttgacattggtgaacttctgcacattttatctgatcaaggtcggcagaacatggttactgctctggatgtagcgatgcctgccccttctttgacagatagagatgctatggggaacatagagatgaagttgcactctttgacccctgaaatcagcgatgaggatgaagatccttattcagttgaatcgctggtggttcatggagctcttgataaaggtgggcaaaggacttccatatcacaagtgaaaggctcggtatgttcagtctatgaagccagagagacaaagccaaaattttcccatctctcagcatctctttgccccctccctgtcccccttccgttcccgtcaatcttcagaggcaacattggccggcatggggagatccttagcgaccatgcagaagaatcccagccaaagggctcactcgatattgaatcgataccgatggcggcacgattacgatcaagcagcgccgtcctgcctttcatagagaggcgatcggggagcctccagaagcacggtgtcgcaagaggtgccatcgggtctctggtcctccgtgactggggcttcgggagggaggaggtggaagacatggcggagcacctagcaaagttactcggcccgtttcaccctgaaatggatcttacttcggattctgactag</cdnaseq>

Protein Sequence

<aaseq>MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNDA LDMDVLYRSGETHQGIPTYCPRLVSVGSRGSLGSLSSSGNLGQTSASADQLNVATWSG SVTRSVSKPHGRNLFLQSLVEEGQNPSTSNGASNSQKSVEDKDLIDCLENSVNFWTDY SKVQYHPQSLYELHGSWTDFDKFDNYGSAQEVVSDWSQIEEMNERLRFFVEECDHIQG IQFIVDDSGGFSSVAAQFLENIADDYTNTPVLLYCVRDPMTLGSSRRNQRESIMRALH DAVSFSKLSSFCNLMVPIGPPSLSRSYMSSYLYIQDEKPFHASAVCAAAIHSITVPFR LQRTGPSSDLAHSSGNLDIGELLHILSDQGRQNMVTALDVAMPAPSLTDRDAMGNIEM KLHSLTPEISDEDEDPYSVESLVVHGALDKGGQRTSISQVKGSVCSVYEARETKPKFS HLSASLCPLPVPLPFPSIFRGNIGRHGEILSDHAEESQPKGSLDIESIPMAARLRSSS AVLPFIERRSGSLQKHGVARGAIGSLVLRDWGFGREEVEDMAEHLAKLLGPFHPEMDL TSDSD</aaseq>

Gene Sequence

<dnaseqindica>3387..3835#2862..2981#2531..2773#1868..2120#1374..1724#745..824#600..645#396..497#210..281#cgatttgtcgcgccgctcccctccccgtcacggccgccgccgccgctgccgccgtttggctgagcacctcgccgccggcgctattccccaccggggcggcctcgccggcgtatctgtggtgatttgtgctgcgagagaaacttctttgtcgactccgccgccgcggttgcggttcaggagcttgccgagctcggcgaggggcggcggcaatgagggaggcggtgacggtgcaggtcggcggcttcgccaactacgtcggctcccacttctggaacttccaggtgagcccccccccctctctcgtctccggcaagatccccaacttgttgctccacctggtgcaagaacctgacgctgacgcttcttgttcttcttgttggggtcttcttctccaggatgagttgctcgggctcgccgacgaccccgacgccgacccagtcttcaagaacgacgcgctggacatggacgtcctctaccgctccggcgagacgcaccaggtagagccgctcgtccttatcattaaggaaaatatacttattttttttctgctactgctcatctcttactgactactagcatacaatgcttgatttcaccagggtatacccacatactgccctcgtctggtgtcggttggttctcgaggtaatctgactgaatttgatccaagtattgtagtgtgtaacaactgttattttgttactgatagtgttggctgcgtgttcacggtggtatcatttgcagggtcccttggttctttgagttcatctggtaatctcggtcagaccagtgcttctgcagatcagctcaatgttgctacatggcaagtggtgctctaacttctccagaatatgcttccatgtttggtttttcttattgtgcccaccatgcataaatgatcgctgtaatttggcatgtacaagctacgcagaagaatactgttgtttcagtttagtataagattgcttgtgcaaatgggttacagagttaaataagcttaggtatctacaactgggggataattctgacaaatggaggaagcatgtctgcattgtcaaagaaagcagatagcaaatatagcagctttgctctagcagtgagctgctcttatgctgataataagggagcaatggactggtagtaacgatgcatatacccatccagcttctgtggaagtgatgcattgcatctgcctattattttcgtagagttgcattcatcttttggcctgctgttgcttgttatgtgctgctgtcatgcatgctatcagtaactatatgctaatatcatcgacgagaataggggcacctatatattgaataatgtgtcgggctcatatattaccatgatgattttttcctggtttatgtaggtctggaagtgtaacaagatcagtctcaaaacctcatgggcggaacttgtttctgcaaagcttagttgaagaagggcagaatccaagcactagcaatggtgccagcaactcccagaaaagtgttgaggataaggacctgatcgactgtctagagaatagcgtcaacttttggacggattattcaaaagttcagtatcatcctcagagtttatatgagttacatgggtcatggacagactttgacaagtttgataactatggcagcgcacaagaggttgtttcagactggtcgcaaatagaggaaatgaatgagaggctaaggttctttgttgaagaatgcgaccatattcaggtcctacttttccccagtgaattatcagcaaactctactatagttttgcaacaagctaatgttcacttatgcacatcatttccgatatcatgcatattttgagaccattatttttagcttaattgattcataatttaccacagggcatccagtttattgtggatgattcaggaggtttttccagtgtagctgcacagtttttggagaacattgctgatgattacacaaatacacctgtattgctttactgtgtgagggatccaatgacccttggatcatccaggaggaatcaaagggagtccattatgagagctcttcatgatgctgtttcattttcaaaactttcgtccttttgcaacctgatggtacccataggaccgccttcattaagtagaagtatgtcctttgcctgaactccacatttttagtttatttttttattcttttttgaaaactttccattcgagcacttttaggtctggggagttctcgtaagttggctaaatacacaggaggatactaaattgcgatgctattgttattctgtgattttataggacttctttccggtagcctaattttgcttttgattgctttcatgtatactgatcttgtgccttaagatactgcacttgattgcatttccattaaatatcaactccttttgttcatgctgtatattcacatttgatttccatacaaaattactttcatgaattcccttaaaaaaatactttcatgaatgtacagaaagcttattctgtatgagattttctcacaaatttcctttcactctgtttcatcaggttacatgtcatcgtatctttatatacaagacgagaaaccattccatgctagtgctgtttgtgctgcagcaatacattcaattactgttccatttagattgcaacgaacgggcccgagttcagacttggcacattcatctggtaatcttgacattggtgaacttctgcacattttatctgatcaaggtcggcagaacatggttactgctctggatgtagcgatgcctgccccttctttgacaggtacacaacataacatatgtcctactgtcataccaacattggatggaaatttaatcttgcttgctaattgcacacttgtaatttgcagatagagatgctatggggaacatagagatgaagttgcactctttgacccctgaaatcagcgatgaggatgaagatccttattcagttgaatcgctggtggttcatggagctcttgataaaggtctgcacatcttatcttttgccatagggtctgattaaggctgtgttcggtactggaggatgggaacctatctcctccgcacggaaaacagagtggtccattagcgcgtgattaattaagtattagctttttttttcaaaaatggatcaatatgatttttttaagcaactttcgtatagacactttttgcaaaaaacacactgtttagcagtttgaaaagcatgcgcgcggaaaacgagatgggggagttgggaagtcctattatttgtcatgccaacagaacttatttttctactgttatattgtacaatattgaacatttcacaacattataggcatggtggctaaattttggttatacatgtagaagtacaaagaattaacaattgaaatttgtttgcacaggtgggcaaaggacttccatatcacaagtgaaaggctcggtatgttcagtctatgaagccagagagacaaagccaaaattttcccatctctcagcatctctttgccccctccctgtcccccttccgttcccgtcaatcttcagaggcaacattggccggcatggggagatccttagcgaccatgcagaagaatcccagccaaagggctcactcgatattgaatcgataccgatggcggcacgattacgatcaagcagcgccgtcctgcctttcatagagaggcgatcggggagcctccagaagcacggtgtcgcaagaggtgccatcgggtctctggtcctccgtgactggggcttcgggagggaggaggtggaagacatggcggagcacctagcaaagttactcggcccgtttcaccctgaaatggatcttacttcggattctgactagatcatcttcaaaaatcttacttggagaatcaagcatgatctatctgttacaatgtatgtggattgttgtaatactgaatttgtttttcagagggttttcagatactgaaaattcatgctcatgtggctggctgttttgaaatcaagaatgagagatctgaatctatgctatggtagaatttctttttcttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0240900, RefSeq:Os03g0240900