Os03g0241900

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Revision as of 12:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0241900| Description = Similar to Senescence-associated protein 12| Version = NM_001056055.1 GI:115451838 GeneID:4332215| Length = 3605 bp|...")
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Gene Name

Os03g0241900

Description

Similar to Senescence-associated protein 12

Version

NM_001056055.1 GI:115451838 GeneID:4332215

Length

3605 bp

Definition

Oryza sativa Japonica Group Os03g0241900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7549489..7553093

Sequence Coding Region

7549755..7549947,7550561..7550645,7551017..7551183,7552023..7553026

Expression

GEO Profiles:Os03g0241900

Genome Context

<gbrowseImage1> name=NC_008396:7549489..7553093 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7549489..7553093 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccaagcagagcctctaccccgaggtgaaccagtcccaccccgacctcaacaccgccttcctcgccaaccccaaccgcgccgccactgccagccctggcggctcgctctacccctccgtcgacccgcagcagctcgccgagaacctcttccccgacgccgccgatgacgccgcgccgccgcctcccaccaccgaggaggccctcgtcgcggttccgggcgcgcagctccacctcgtcgaccccgaccgcagcatggacctcggtgccggcacgctctccgtcgtccgcctccgccagggggaccactccgtcgccgtcctcgcgaggctcgtcccggagaagcgcagccagcgccgcggcggcctcttcggcttcttgagcggcggcgggaaggccggcgacggcgccgcgcaggagcccgtccagtggccgctcacccgcgacgtcgccgccgtcaagctcgacaccgcgcactacttcttctcgctccacgtcccgcacacagatcacgaggatgacgacgccgagggggccgaggcggagaaggacgcggacggggaggcggcgctgagctacgggctcacggtcgccagcaaggggcaggaggcggtcttggcccagctggacaaggtactggaggagtacaccaccttctccgtgaagcaagtggagccggcggcgaaggagaagtcggaggtgatggacacgaaggcggtgacggagatcacgccggaggaggccgttggggacaagaaggaggtggtggaggagcaatcagcggcgttctggacgacgatcgcgccgaacgtggacgactacagctcgtcggtggcgaggctgatcgcgcggggctcggggcagctggtgaggggcatcatctggtgcggggacatcacagcggagggcctccggtgtggggaggcggtggtgaagaagagcgtggggccgagtgggaagccgtcacaggtgaagccgagcactatcaggaggatgaagagggctagaagggttacgaagatgtccaacagggtagcaaattcaatcctctctggtgttctaaaggtctctgggtttgttaccagcactgtgctgaactcgaaacctgcccagaaattctttaagttgatgctgggcgaagttattcttgcttcactcgatggatttgggaaagtatgggatgctgtagaggtgtctggaaagaacgtgatgcgaacgtcgtcggttgtgacaacttctgttgtaacacatagatacggagatcaagctggacaggtcacacaggattaccttcacgcctctggaaacgctcttggagtcgcatgggctgtcttcaaaattcggaaagctctcgacccaaagggcaatctgaagaagtcgtctctggcgagcgctgctgcccatgctgtagctaaagaatcgatatctcggcaaagaaggaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAKQSLYPEVNQSHPDLNTAFLANPNRAATASPGGSLYPSVDP QQLAENLFPDAADDAAPPPPTTEEALVAVPGAQLHLVDPDRSMDLGAGTLSVVRLRQG DHSVAVLARLVPEKRSQRRGGLFGFLSGGGKAGDGAAQEPVQWPLTRDVAAVKLDTAH YFFSLHVPHTDHEDDDAEGAEAEKDADGEAALSYGLTVASKGQEAVLAQLDKVLEEYT TFSVKQVEPAAKEKSEVMDTKAVTEITPEEAVGDKKEVVEEQSAAFWTTIAPNVDDYS SSVARLIARGSGQLVRGIIWCGDITAEGLRCGEAVVKKSVGPSGKPSQVKPSTIRRMK RARRVTKMSNRVANSILSGVLKVSGFVTSTVLNSKPAQKFFKLMLGEVILASLDGFGK VWDAVEVSGKNVMRTSSVVTTSVVTHRYGDQAGQVTQDYLHASGNALGVAWAVFKIRK ALDPKGNLKKSSLASAAAHAVAKESISRQRRK</aaseq>

Gene Sequence

<dnaseqindica>3147..3339#2449..2533#1911..2077#68..1071#aattgcttccctcttatctctcgattgatccacgaacagtgacaccgccgcgcacagcgaatccgccatggccgccaagcagagcctctaccccgaggtgaaccagtcccaccccgacctcaacaccgccttcctcgccaaccccaaccgcgccgccactgccagccctggcggctcgctctacccctccgtcgacccgcagcagctcgccgagaacctcttccccgacgccgccgatgacgccgcgccgccgcctcccaccaccgaggaggccctcgtcgcggttccgggcgcgcagctccacctcgtcgaccccgaccgcagcatggacctcggtgccggcacgctctccgtcgtccgcctccgccagggggaccactccgtcgccgtcctcgcgaggctcgtcccggagaagcgcagccagcgccgcggcggcctcttcggcttcttgagcggcggcgggaaggccggcgacggcgccgcgcaggagcccgtccagtggccgctcacccgcgacgtcgccgccgtcaagctcgacaccgcgcactacttcttctcgctccacgtcccgcacacagatcacgaggatgacgacgccgagggggccgaggcggagaaggacgcggacggggaggcggcgctgagctacgggctcacggtcgccagcaaggggcaggaggcggtcttggcccagctggacaaggtactggaggagtacaccaccttctccgtgaagcaagtggagccggcggcgaaggagaagtcggaggtgatggacacgaaggcggtgacggagatcacgccggaggaggccgttggggacaagaaggaggtggtggaggagcaatcagcggcgttctggacgacgatcgcgccgaacgtggacgactacagctcgtcggtggcgaggctgatcgcgcggggctcggggcagctggtgaggggcatcatctggtgcggggacatcacagcggagggcctccggtgtggggaggcggtggtgaagaagagcgtggggccgagtgggaagccgtcacaggtgaagccgagcactatcaggaggatgaagaggtatggattgtgaaagaagattattatttattcttgttgttattatctcgttttaactttctgagtagctcacatcgtcaacatttttctactagaattcaccgtttagatgaaaaaaaaacttgttcgatagcatgtaattggttctgttggcttctggtggtattttagttagtagtctcatgttctgaattcgcatatatagatgaactgcttataacattattgtttctttggacctcaatacctcatatattaaatagtataactacatagaagatgctgactcaatagttagattgtacaagtctcttttatcagaaaatttctctttggacagacgttgacactcctttctattttgttactgcaaagcaaatgtcccactcaattattcaagtattatcttttggtggcaatactccatctctggtgggctgtcgatatttagtatagttgattgatgaagaattgacaatttactcggtggatatttactttgtctttgtgctaattcattgctgattgtctcttatcctagaggacacctaggctttatgtcgttgtcaacggtgatgtgttaaaaccaataagagattaagagttgctagtgccttatagagtaaaagaatgtgatgctagcaacctgtaattcttattgaaacatgcttataactatatcataggctagttatatcaagcatcaatattgttagtgaaaaatgaaaacttttatctcctggtgtcatcatattttattgcattatttaagataacataatcacctttttgtgccctgcattgtacttgtttgacttaagttttgttgtttttctcagggctagaagggttacgaagatgtccaacagggtagcaaattcaatcctctctggtgttctaaaggtctctgggtttgttaccagcactgtgctgaactcgaaacctgcccagaaattctttaagttgatgctgggcgaagttattcttgcttcactcgatggatttggtatggccctgtcccattatcagaaaatgctaaatttacgaagttgtatttcatttatgcagctatatgtttctagaaggtttgaaactttggatctatgatcattttagaatttagaaggaaccagatagaataaattcatgttgctcttattgtcttaatttttgtagtgtgatcagaattcactttactctctgtagttaaaaaaacgtcatgtttttcttaattattaagactatattgcaaaaaggcttggtacatataacgtactatgtcatgtttttagctcatgcatggtgttttaccataacatgttttgtataattcttactgtatttcgaattattaattgttcatttttgatgattcagggaaagtatgggatgctgtagaggtgtctggaaagaacgtgatgcgaacgtcgtcggttgtgacaacttctgttgtaacacataggtaaatacacaataccttctattctatgcttcattcaaaatgttctccttgtcattgaagcccgcagaaaccaatttgtagttaacaagtagtcactttttgaaactatacacgctagtactagtattggttttttagggacctgttatcttgtacggtgcaaacaacagtctgcaccatcttcatcttattttatgttgttacagaaaggagcatacatttcactaagtaaaggaatgactcacgaaatttaagcatatacttatctgaacatataaataaacacagaaatccttgcgctatcaacacatacgaagcaaagcttttgacttctttacaaaaataaataaataaataataaacacagagagataacaacaaaacagccaaacatatgggttacaaaactttgatcttagaaaactggaaatgcctgcagacggttttccttccgctgcatacaagttactgtttgttatcaaatcgcttttctgcaaaaggcagcttgttgtatagttgtttttcagtgtcatttaaacaaaaaacaaaaacaaaatgtctgatacataagatcgtttgatgctggtagaggctgatgacttgtttattgcagatacggagatcaagctggacaggtcacacaggattaccttcacgcctctggaaacgctcttggagtcgcatgggctgtcttcaaaattcggaaagctctcgacccaaagggcaatctgaagaagtcgtctctggcgagcgctgctgcccatgctgtagctaaagaatcgatatctcggcaaagaaggaagtgagacaacacggtcgatggtggaactcgctgttactctctaatacggtgtactagcttcaatagaaatgctcttttgtgaacttggcggctatagcagattttgttggatgtgtcgcttgtaacttgtaaggcgtgtgactgttgccgtgatggttttgatgtttgttttggtttttggatgtttgcgaattgcgatgatgtactgatttgtaacctgtcgaattactatatgtgtatacatgatgcacagtgatctcacggtttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0241900, RefSeq:Os03g0241900