Os03g0242900

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0242900| Description = Similar to SBT2 protein (Subtilisin-like protease)| Version = NM_001056059.2 GI:297600632 GeneID:4332219| Length = 2...")
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Gene Name

Os03g0242900

Description

Similar to SBT2 protein (Subtilisin-like protease)

Version

NM_001056059.2 GI:297600632 GeneID:4332219

Length

2867 bp

Definition

Oryza sativa Japonica Group Os03g0242900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7608443..7611309

Sequence Coding Region

7608903..7611245

Expression

GEO Profiles:Os03g0242900

Genome Context

<gbrowseImage1> name=NC_008396:7608443..7611309 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7608443..7611309 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgctgctccccactgcctcctgctcctcctcgtgctgatcccgacgctgttgcgaggcgtcgtcggcgggagcggcgccggtggcgaggcgaggaagacgtacatcttccgcgtcgaccacagcgccaagccgtcggtgttccccagccacgcgcactggtactcctccgccgccttcgcctccggtgccgacggggccccgctcgagccgctccatgtctacgacaccgtcttccacggcttcgcggcttcggttccggcttcccgcgccgacgcgctgcggcgccacccggccgtcctcgcggcgttcgaggaccaggtccggacgctgcacaccaccaggtcgccgcagttcctgggcctccgcgctcggcttgggctttggtccctcgcggactacggctcggatgttgtcgttggggtgctcgacaccggcgtgtggcccgagcgccggagcttgtctgataggaacctcccacccgtcccctcccggtggcgtggcggctgcgacgcgggtcctgggttcccggcgtcgtcctgcaacaggaagctcgtcggtgcgcgattcttctcgcagggccacgcggcgcactacggccttgcggccacggcgtccaacgggtcggtggagtttatgtcgccgcgcgacgccgatgggcacgggacgcacactgccacgacggcggccggcagcgtcgcctacgatgcgagcatggaggggtacgcgcccggggtcgccaagggcgtcgcgcccaaggccagggtggccgcgtacaaggtttgctggaagggagctggctgcctcgactccgacatccttgccggattcgaccgcgccgttgcagacggcgtggacgtcatctctgtctccataggcggtggcaatggcgtcgcgtcgccattctacctcgacccaatcgcgatcggcgcgtacggcgccgtgtcgcggggagtattcgtggccacctccgccggcaacgaggggccgactgccatgtcagtgaccaaccttgcgccatggctcgccaccgtgggcgccggtaccatcgaccgtaatttccctgccgaaatcgtgctcggcgacggaaggcgcatgtcaggggtgtctctgtattctggcaagccgctgacgaacaccatgttgccattgttctaccccgggagatcaggtgggctgtcagcttccttgtgcatggagaactccatcgacccctctgtggtgtccggtaagattgtcatctgcgaccgcggcagcagcccacgcgtggcgaaggggatggttgtgaaggacgctggtggcgtggcaatggtcctcgcgaacggagcggccaacggcgaaggccttgttggagacgcccatgtccttcctgcttgctcggtgggcgagaacgagggagacacgctcaaagcatatgctgccaacaccaccaacccaaccgcaacaatcaacttcaagggcacggtcatcggcgtcaagccagcgcccgtggtggcctccttctcggcgcggggccccaacggcctcgtcccggaaatccttaagccggacttcattgccccgggcgtcaacatcctcgcggcatggacgggcgccacgggcccaaccggtctggaatccgaccctcggcggacggagttcaacatcctgtcgggcacctcgatggcgtgcccgcacgcgagcggcgccgcggcgctgctccggtccgcgcaccccgggtggtcgccggcggcgatacgctccgcgctgatgaccacggccgtcgccaccgacaaccgcggcgaggccgtgggcgacgaggccgagcccgggcgcgtcgcgacgccgttcgactacggcgccgggcacatcaacctggggaaggcgctggacccggggctggtgtacgacatcggggacgacgactacgtcgcgttcatgtgcagcatcggctacgaggccaacgcgatcgaggtgatcacgcacaagcccgtggcgtgccccgcgacgagcaggaacccctcgggctccgacctcaactacccgtcgatctccgtggtgttctacggcggcaaccagtccaagacagtgatacgcacggcgaccaacgtcggcgccgcagcgtccgcgacgtacaagccacgcgtggagatggcgagcagcgccgtgtccgtaaccatcaagccggaaaagctcgtcttctccccgaccgccaagacgcagaggttcgccgtcacagtggcctcgtcgtcgtcgtctccccccgcatccgcgccggtgtacggacacctcgtctggtccgacggcggcgggcacgacgtgcggagccccatcgtggtgacgtggctgcagtccatgtga</cdnaseq>

Protein Sequence

<aaseq>MAAAPHCLLLLLVLIPTLLRGVVGGSGAGGEARKTYIFRVDHSA KPSVFPSHAHWYSSAAFASGADGAPLEPLHVYDTVFHGFAASVPASRADALRRHPAVL AAFEDQVRTLHTTRSPQFLGLRARLGLWSLADYGSDVVVGVLDTGVWPERRSLSDRNL PPVPSRWRGGCDAGPGFPASSCNRKLVGARFFSQGHAAHYGLAATASNGSVEFMSPRD ADGHGTHTATTAAGSVAYDASMEGYAPGVAKGVAPKARVAAYKVCWKGAGCLDSDILA GFDRAVADGVDVISVSIGGGNGVASPFYLDPIAIGAYGAVSRGVFVATSAGNEGPTAM SVTNLAPWLATVGAGTIDRNFPAEIVLGDGRRMSGVSLYSGKPLTNTMLPLFYPGRSG GLSASLCMENSIDPSVVSGKIVICDRGSSPRVAKGMVVKDAGGVAMVLANGAANGEGL VGDAHVLPACSVGENEGDTLKAYAANTTNPTATINFKGTVIGVKPAPVVASFSARGPN GLVPEILKPDFIAPGVNILAAWTGATGPTGLESDPRRTEFNILSGTSMACPHASGAAA LLRSAHPGWSPAAIRSALMTTAVATDNRGEAVGDEAEPGRVATPFDYGAGHINLGKAL DPGLVYDIGDDDYVAFMCSIGYEANAIEVITHKPVACPATSRNPSGSDLNYPSISVVF YGGNQSKTVIRTATNVGAAASATYKPRVEMASSAVSVTIKPEKLVFSPTAKTQRFAVT VASSSSSPPASAPVYGHLVWSDGGGHDVRSPIVVTWLQSM</aaseq>

Gene Sequence

<dnaseqindica>65..2407#ctgcagcgcactacccccccgcttccaccgctccacgacaccgtcactctcgccgagcaatccaatggccgctgctccccactgcctcctgctcctcctcgtgctgatcccgacgctgttgcgaggcgtcgtcggcgggagcggcgccggtggcgaggcgaggaagacgtacatcttccgcgtcgaccacagcgccaagccgtcggtgttccccagccacgcgcactggtactcctccgccgccttcgcctccggtgccgacggggccccgctcgagccgctccatgtctacgacaccgtcttccacggcttcgcggcttcggttccggcttcccgcgccgacgcgctgcggcgccacccggccgtcctcgcggcgttcgaggaccaggtccggacgctgcacaccaccaggtcgccgcagttcctgggcctccgcgctcggcttgggctttggtccctcgcggactacggctcggatgttgtcgttggggtgctcgacaccggcgtgtggcccgagcgccggagcttgtctgataggaacctcccacccgtcccctcccggtggcgtggcggctgcgacgcgggtcctgggttcccggcgtcgtcctgcaacaggaagctcgtcggtgcgcgattcttctcgcagggccacgcggcgcactacggccttgcggccacggcgtccaacgggtcggtggagtttatgtcgccgcgcgacgccgatgggcacgggacgcacactgccacgacggcggccggcagcgtcgcctacgatgcgagcatggaggggtacgcgcccggggtcgccaagggcgtcgcgcccaaggccagggtggccgcgtacaaggtttgctggaagggagctggctgcctcgactccgacatccttgccggattcgaccgcgccgttgcagacggcgtggacgtcatctctgtctccataggcggtggcaatggcgtcgcgtcgccattctacctcgacccaatcgcgatcggcgcgtacggcgccgtgtcgcggggagtattcgtggccacctccgccggcaacgaggggccgactgccatgtcagtgaccaaccttgcgccatggctcgccaccgtgggcgccggtaccatcgaccgtaatttccctgccgaaatcgtgctcggcgacggaaggcgcatgtcaggggtgtctctgtattctggcaagccgctgacgaacaccatgttgccattgttctaccccgggagatcaggtgggctgtcagcttccttgtgcatggagaactccatcgacccctctgtggtgtccggtaagattgtcatctgcgaccgcggcagcagcccacgcgtggcgaaggggatggttgtgaaggacgctggtggcgtggcaatggtcctcgcgaacggagcggccaacggcgaaggccttgttggagacgcccatgtccttcctgcttgctcggtgggcgagaacgagggagacacgctcaaagcatatgctgccaacaccaccaacccaaccgcaacaatcaacttcaagggcacggtcatcggcgtcaagccagcgcccgtggtggcctccttctcggcgcggggccccaacggcctcgtcccggaaatccttaagccggacttcattgccccgggcgtcaacatcctcgcggcatggacgggcgccacgggcccaaccggtctggaatccgaccctcggcggacggagttcaacatcctgtcgggcacctcgatggcgtgcccgcacgcgagcggcgccgcggcgctgctccggtccgcgcaccccgggtggtcgccggcggcgatacgctccgcgctgatgaccacggccgtcgccaccgacaaccgcggcgaggccgtgggcgacgaggccgagcccgggcgcgtcgcgacgccgttcgactacggcgccgggcacatcaacctggggaaggcgctggacccggggctggtgtacgacatcggggacgacgactacgtcgcgttcatgtgcagcatcggctacgaggccaacgcgatcgaggtgatcacgcacaagcccgtggcgtgccccgcgacgagcaggaacccctcgggctccgacctcaactacccgtcgatctccgtggtgttctacggcggcaaccagtccaagacagtgatacgcacggcgaccaacgtcggcgccgcagcgtccgcgacgtacaagccacgcgtggagatggcgagcagcgccgtgtccgtaaccatcaagccggaaaagctcgtcttctccccgaccgccaagacgcagaggttcgccgtcacagtggcctcgtcgtcgtcgtctccccccgcatccgcgccggtgtacggacacctcgtctggtccgacggcggcgggcacgacgtgcggagccccatcgtggtgacgtggctgcagtccatgtgactgacgactggggacacctcacagctggtcccacgggctggccataagatggcggtaaccgttactctaggtcaaaaagaggtgggcctgtaacggttattttttcggtcgggatggcagtgcagagcgcagtagtcgtctttaattttggtggggccttgcactcacccgaaattgattaaagcgcatggtgtaatagcgcagcgtacagtggcagtgtgtgtgagtgactcggtgtatgacagtgtgacatagagtcagtatgatacggtctactgtactgttttgtactactcgtttgtttgctttcgcgggcaacgctacttgccaggagcaacgggaaagaaaggaggaaacaagacaaaaactaatccagatatactcgcactagtagcactgtttctatgtgggatatctgaatgggattctaaatataatcgaggtttttgtcttttttcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0242900, RefSeq:Os03g0242900