Os03g0243600

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0243600| Description = Acyl-coA-binding protein, ACBP family protein| Version = NM_001056063.1 GI:115451854 GeneID:4332223| Length = 5536 b...")
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Gene Name

Os03g0243600

Description

Acyl-coA-binding protein, ACBP family protein

Version

NM_001056063.1 GI:115451854 GeneID:4332223

Length

5536 bp

Definition

Oryza sativa Japonica Group Os03g0243600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7641195..7646730

Sequence Coding Region

7641362..7642785,7645086..7645191,7645296..7645384,7645673..7645734,7646376..7646404

Expression

GEO Profiles:Os03g0243600

Genome Context

<gbrowseImage1> name=NC_008396:7641195..7646730 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7641195..7646730 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctgttctacgagctgctcctcacggcggctgcctccctcctcgtcgccttcctgctggccaggctgctggcctccgccgccaccgccagtgatccccgccgccgcgcgcccgatcacgccgccgtgatcgcggaggaggaggcggtggtggtggaggaggagaggatcatcgaggtcgatgaggtcgaggtgaagagcgcgcgcgcgagggagtgcgtggtttcggaggggtgggtcgaggtggggagggcctcgtcggcggaggggaagctcgagtgcttgccggaggaagaggaggctcccgcgaaggccgctcgggagcttgttctcgatgccgttttggaggaacgcgaggaggaaggacaagttggcgaagagcggtgcgatttggccgctgcggtggcggaggtcgtgggagtgaagccgcatgagttgggggttgaagctgctcccggggaggtatctgacgtgacgctggaggaagggaaggtgcaggatgttggggtggagcagcatgatttggtcgccgaggctgctccaagggaagctcttgacacagggttggagaaacagggtgttcccatcattgaagcggttgaaatcaagcggcaggatgatctgggtgctgaggtagctccgagtgacgttcctgaggtggaatttgagcaacagggagttcgcattattgaagctattgatgtgaatcaacatcatcgggttgctctggctgctcctgcggaagttgttgatgcgggattggaggagagggtccaagctattgaagcagggtcatctggattgacttccgagacagttcctgaagaggttcttgacgagttatctgagaagcaagaagagcaagttattgaagagaaggaacatcaattggctgcagcgactgctccagtagcaattcctggtgtggcattggcagagacggaggaacttaaagaagaacaatcctctgaaaaagctgtcaatgttcatgaagaagttcagagtaaggacgaagctaaatgcaagctccatctggttgatcaacaagaaggttcggcttctaaggtggagctggtggggaggaataccgacaatgtggaaattagccatggaagcagttctggtgacaaaatgattgctgagttgaccgaggaggaattgacattgcaaggtgtgcccgcagatgagactcagacagacatggaatttggggagtgggaagggattgaaagaactgagatagaaaagaggtttggtgtggcagcagcgtttgcatctagtgacgccgggatggctgccctgtcaaagcttgatagtgatgtgcagctgcagctgcagggactccttaaggttgccattgatggtccatgctatgactctacacagccacttaccttgaggccttcatctcgtgcaaaatgggctgcttggcaaaagctagggaacatgtatccggagacagctatggaaagatacatgaatcttttgtcagaggctattccaggatggatgggtgacaatatctcgggcacaaaggaacatgaagctggtgatgatgctgtagggtctgtcttaacaatgacttcaaatacaatcaaccaacatgacagtcaagggaatgaagacaatactggcatgtatgaaggtcacttgacaagttcccctaacccagagaaaggacagagttctgacatccctgctgaatga</cdnaseq>

Protein Sequence

<aaseq>MELFYELLLTAAASLLVAFLLARLLASAATASDPRRRAPDHAAV IAEEEAVVVEEERIIEVDEVEVKSARARECVVSEGWVEVGRASSAEGKLECLPEEEEA PAKAARELVLDAVLEEREEEGQVGEERCDLAAAVAEVVGVKPHELGVEAAPGEVSDVT LEEGKVQDVGVEQHDLVAEAAPREALDTGLEKQGVPIIEAVEIKRQDDLGAEVAPSDV PEVEFEQQGVRIIEAIDVNQHHRVALAAPAEVVDAGLEERVQAIEAGSSGLTSETVPE EVLDELSEKQEEQVIEEKEHQLAAATAPVAIPGVALAETEELKEEQSSEKAVNVHEEV QSKDEAKCKLHLVDQQEGSASKVELVGRNTDNVEISHGSSSGDKMIAELTEEELTLQG VPADETQTDMEFGEWEGIERTEIEKRFGVAAAFASSDAGMAALSKLDSDVQLQLQGLL KVAIDGPCYDSTQPLTLRPSSRAKWAAWQKLGNMYPETAMERYMNLLSEAIPGWMGDN ISGTKEHEAGDDAVGSVLTMTSNTINQHDSQGNEDNTGMYEGHLTSSPNPEKGQSSDI PAE</aaseq>

Gene Sequence

<dnaseqindica>168..1591#3892..3997#4102..4190#4479..4540#5182..5210#ggttgctcgatcgtctcgctctcctctcctcttctcttcgtctctcctcctgaccctttttccgctttcccttttcccccctcctcgatccgcggcgcaaccgaacacgaaagcgagagagagaggagtgcagccgctgccctgtcccctcaccgcgccgcgccgacatggagctgttctacgagctgctcctcacggcggctgcctccctcctcgtcgccttcctgctggccaggctgctggcctccgccgccaccgccagtgatccccgccgccgcgcgcccgatcacgccgccgtgatcgcggaggaggaggcggtggtggtggaggaggagaggatcatcgaggtcgatgaggtcgaggtgaagagcgcgcgcgcgagggagtgcgtggtttcggaggggtgggtcgaggtggggagggcctcgtcggcggaggggaagctcgagtgcttgccggaggaagaggaggctcccgcgaaggccgctcgggagcttgttctcgatgccgttttggaggaacgcgaggaggaaggacaagttggcgaagagcggtgcgatttggccgctgcggtggcggaggtcgtgggagtgaagccgcatgagttgggggttgaagctgctcccggggaggtatctgacgtgacgctggaggaagggaaggtgcaggatgttggggtggagcagcatgatttggtcgccgaggctgctccaagggaagctcttgacacagggttggagaaacagggtgttcccatcattgaagcggttgaaatcaagcggcaggatgatctgggtgctgaggtagctccgagtgacgttcctgaggtggaatttgagcaacagggagttcgcattattgaagctattgatgtgaatcaacatcatcgggttgctctggctgctcctgcggaagttgttgatgcgggattggaggagagggtccaagctattgaagcagggtcatctggattgacttccgagacagttcctgaagaggttcttgacgagttatctgagaagcaagaagagcaagttattgaagagaaggaacatcaattggctgcagcgactgctccagtagcaattcctggtgtggcattggcagagacggaggaacttaaagaagaacaatcctctgaaaaagctgtcaatgttcatgaagaagttcagagtaaggacgaagctaaatgcaagctccatctggttgatcaacaagaaggttcggcttctaaggtggagctggtggggaggaataccgacaatgtggaaattagccatggaagcagttctggtgacaaaatgattgctgagttgaccgaggaggaattgacattgcaaggtgtgcccgcagatgagactcagacagacatggaatttggggagtgggaagggattgaaagaactgagatagaaaagaggtttggtgtggcagcagcgtttgcatctagtgacgccgggatggctgccctgtcaaagcttgatagtgatgtgcagctgcagctgcagggactccttaaggttgccattgatggtccatgctatgactctacacagccacttaccttgaggccttcatctcgtgcaaaatggtaattgtttttctcattgatatcctagctccaactttttttttggtatgctgcacaactgcggtaggttatatagttcaaggacaacaaaaccaatatactacccaaatgccttactttgcactggctagaatgtaatcggcaatggacttgtgatttataggcagatcaggtatactggtctgaaatagcttaaactagtcctttttttggcaaaagaccaaagtacagaactttgaactctgaattctgggtagttggtagatagactgtaatgacatattagaaaactgaattgtttgatctgctggtctgtttgatctagttgggacttcttatggctactatgacacttatgtatgaaatttggtcctagctatttggctaaacctaaaaaagagccaaagaactggttcaaaattttgaatcccattttactgcggaacatagaacttctctgtggaacaataaacgactcatataatgcaaaagtttttaatcttttgcataattgattgttaaaattagaaaaatattttcctaccttatgttgtgacttgagacaatgagaatctgtcctctaatttgttaaggggaaaaaaagcttctgtcaacttttctgggctatctaaacaaagacattaaatgtgccatttttgttttatattgtttaataaacttgttatgctaaaagaagataattatagttgtccatcatcagtgaagataaagataagtgaattataattgcccatcatcaatgggataatgcacttaaaccagtgatatagtgtgtaatagtgtaaggatgtcactgatacgctgatcttctgtcatgcataatggtgtgtggttcacatgagaatctatcaagtttttgggataagttgcaagtgaaggcaaagcaaagcatatgaaaagcatagtatttttagaggtatcaatccagtgttacttggccgcactgcaaggtagttattcatataaacaggccaaaacacttcatctatgtatgcccaacatgatataactgtgacatgagtgcaggacacacatattgcaatattccatgcttaatgcagtcagatttgtaatttggagtgcttctccgagatagtttgtaactaatcatgtagctactatttggaatccaaaaatggacaaaatccaatgtcaaatatatgatgtaagcagttattgagatgctgatacgctaggtatttctcttgttggacataattatatatgagtatatcattgaactataggtattttgtcaaagctacctaaaacgatgcatttgagttgattcaataattatatcttaactgaatacctttatatatgacaaaacctaaatggtgggcgacccccttttcatctcccatatttggcatgtgggacccacctgttagttgcatacttgcatgtgatagacaattatagtactcctgtcacttttgaacatttattctttttactatgagtttttccacaaatacttgtcacttcacagtctcaatcaatcaatttttgtttgcatagagcgcccctgttagttctatatgtgccaccatgtaattcaatatcatatacttggagtgcagaggtagcatatacttacaaaatgggacctatcaaaaaaattactagttgaatttttttcactggtattatgatatgccatcgaatgactgattccagccagatttcctatgataaatgagagtaatgatcacaaattcaaagaattttcatatgttttgcatgtgcgcagcaccttatctctcatttgttggttgtgtagcctttttatattgattctttaaatgggttgctgccaaaagcggagcggggcctgtgtctaaccataacaattaccctttggttgagtgagaacctagatgttttagaatatggaatgctggtcacataatatacatgatgtgacagcatcacagcactgacatcttgcacctatctctctatgttaaggctttctatttagtataatggtagttggttgacaatctatagtcatattcatatatgcctgtaagtaattctggagttatacttgcagtaactatatataacttggctacttatattttttatttccaaaaattatagggaatgtatgttggactatatgaaaaattataagttgtaaatagacataaggaaagacacacaagatggtgggctatttgtttgtaggagttgtacaattctgttaagctgcatacgagtcacagtctgtaatgataacccataactatcgtgtattattctctcagggctgcttggcaaaagctagggaacatgtatccggagacagctatggaaagatacatgaatcttttgtcagaggctattccaggatggatgggtgacaatatctcggtaagtttttctatgggtgccaaagtgttacttctgtttattgcattgtttttttacaccagactggacaatagttctaatcatttcgaaatactgtactctagggcacaaaggaacatgaagctggtgatgatgctgtagggtctgtcttaacaatgacttcaaatacaatcaaccaacatgacagtcaagggtaatttactcatttactgtagtgtgaaacctggaatgtagcaaagtgttgacagggctgaccataccgatgatatacctgccatactaactagtagtatttgttagtgctggtataagaatatcttaaatgaaattcctggctctttagctgtaccagttcttttttacaatggcaatatctacgagtcccaactggtataactcaatctggtacggtaaccttgatttagaagtgtttctaatgtttattaccatggcttgctcctgctgatggatttcttggcaggaatgaagacaatactggcatgtatgaaggtcacttgacaagttcccctaacccagagaaaggtacgtacttgtcatattttcggcagtgaaccaggattttttttatctggctcctaaaagtaaaatattgcaattcattagtgaccagtgttgtgtatttatgcatgacgactggttcaggtgcatttgtgaaattaacttctgatagctatctatcatttttttgcctgcaccctctgtgatctccactttgttaaccacattttgtaaggaaaactaaattacaaggagtatctcctgcgtgtttgagaaaaaaaaacttatggagtatattgcatttcattagtggtagttctcctgccatgcatgtgttgtgcttgctaaccatttaattccaagttaatgtttttctacaccataattaaacaaactactccctcattctttttttacttgctatttcaggcataggtgcagatcacaatgcatgcatttgaccgttacattactgaacttatttagaaaatgatatctaaagtaattttgtgaaaaaaaaatctgctaataccatttcagtgtgaaaatagtataaacatttttagtcaaagaatggaagtgtaccgttcctctatttcagtatgtttctgtttgattacttcgtcaatcaatttcatgaattcaacccgccactaaattttcaggacagagttctgacatccctgctgaatgaacataacactcatggaagatttcttgcatcagtgatttcagcccattgctgagaccgctaccgatgccttcctcataagattagatttgtacagtgctcctgtggtgctaatattagtgttgtcatggtgttggtttgtgtatatatatgactgtatatatcagtaactgccggtcctactgcgtgtattccgccagcagcagacttatcatctggtattctggtgtagtctgtagaacaatacatctggtgagtcgtaattatatgtcgatacgatgcagtttggaaggagaaattgaagtggttggaaaaccagttgaaaggac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0243600, RefSeq:Os03g0243600