Os03g0244600

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0244600| Description = Similar to AUX1-like protein| Version = NM_001056069.1 GI:115451866 GeneID:4332229| Length = 3872 bp| Definition = ...")
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Gene Name

Os03g0244600

Description

Similar to AUX1-like protein

Version

NM_001056069.1 GI:115451866 GeneID:4332229

Length

3872 bp

Definition

Oryza sativa Japonica Group Os03g0244600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7695974..7699845

Sequence Coding Region

7696092..7696277,7696411..7696596,7696708..7696820,7696916..7697099,7697236..7697333
,7698006..7698471,7699235..7699576

Expression

GEO Profiles:Os03g0244600

Genome Context

<gbrowseImage1> name=NC_008396:7695974..7699845 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7695974..7699845 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctcggcggctgacgggagcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatggagcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacggcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtggcccaggtgctcctgacgctgccctactcgttctcccagctggggatgctcagcggcatactgttccagctcttctacgggctgttgggcagctggacggcgtatctcatcagcatcctgtacgtggagtacaggaccaggaaggagagggagaaggtggacttcaggaaccatgtcatccagtggttcgaggtgctggacggcctgctggggaggcattggagaaacgtcggcctggccttcaactgcaccttcctactcttcggctccgtcatccagctcatcgcctgcgctagcaacatctactacatcaacgacaagctggacaagaggacgtggacctacatcttcggcgcgtgctgcgcgacgacggtgttcatcccgtcgttccacaactaccggatctggtcattcctcggcctcgtcatgaccacctacacggcctggtacctcgccgtcgcctccctcatccatggccaggtcgatggagtgaagcactcgggccctacaaagatggtcctctacttcaccggggccacaaacattctctacaccttcggtgggcacgctgttactgtggagatcatgcacgcgatgtggaggccgcagaagttcaaggcgatctacctgatggcgacgctgtacgtgctgacgctgacgctgccgtcggcggcgagcgtgtactgggcgttcggggacgagctgctcacgcactcgaatgcgctggcgctgctgccgcgcacggcgttccgggacgccgccgtggtgctcatgctcatccaccagttcatcaccttcggcttcgcctgcacgccgctctacttcgtctgggagaagctcatcggactccacgactgccgcagcctcttcaagcgcgccgccgcgaggctccccgtcgtcgtgcccatctggttcctcgccatcatcttccccttcttcgggcccatcaactccgccgtcggctccctcctcgtcagcttcaccgtctacatcatccccgccctcgcgcacatgatcaccttccgctccgcgcacgctcgtgagaacgccgtggagccgccgccgcggttcgtggggcgatggacgggcacgttcatcatcaacgcgttcgtggtggcgtgggtgctggtggtcggcttcgggttcggcggctgggccagcatgaccaacttcgtccgccagatcgacacgttcgggctcttcaccaagtgctaccagtgcccgccgccccctctgccgccggcgggcgccgctccgaacgccacctggccgccgttcccggcgacgccgttcaacgccaccaccgccggcctcgctccggcccctgctccttcgccggcgcatttcttcggccgccaccaccggcatcacagccacgggctctga</cdnaseq>

Protein Sequence

<aaseq>MGSAADGSLANEKAPAETVGVGRYVEMEQDGGGPSTAKSRLSGL LWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISI LYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGRHWRNVGLAFNCTFLLFGSVIQLIAC ASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLAVAS LIHGQVDGVKHSGPTKMVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIYLMAT LYVLTLTLPSAASVYWAFGDELLTHSNALALLPRTAFRDAAVVLMLIHQFITFGFACT PLYFVWEKLIGLHDCRSLFKRAAARLPVVVPIWFLAIIFPFFGPINSAVGSLLVSFTV YIIPALAHMITFRSAHARENAVEPPPRFVGRWTGTFIINAFVVAWVLVVGFGFGGWAS MTNFVRQIDTFGLFTKCYQCPPPPLPPAGAAPNATWPPFPATPFNATTAGLAPAPAPS PAHFFGRHHRHHSHGL</aaseq>

Gene Sequence

<dnaseqindica>119..304#438..623#735..847#943..1126#1263..1360#2033..2498#3262..3603#atatcctctcctacgatactgcgcgctcagcacagaagaggaaggtatcttaactagcccaggataccaccacacaccgagtactgttacgtgttcacggtctagctaagcagtgatcatgggctcggcggctgacgggagcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatggagcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacggcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtgaccacattttctgatcgacgctatgcttgcttccattttcttgcgaaatgcatgcaatctaaggtaggtttgtgccgtgatcgatgtgtagccgttcggttaaatctgcattgctgtgtgcttcgatcaggtggcccaggtgctcctgacgctgccctactcgttctcccagctggggatgctcagcggcatactgttccagctcttctacgggctgttgggcagctggacggcgtatctcatcagcatcctgtacgtggagtacaggaccaggaaggagagggagaaggtggacttcaggaaccatgtcatccaggtaaacaaaaactacattgttcaaatccatttcgccgccgtacggtcttctcttctctgtatgttctgtaagttcagaccctgaagacttcaaccattgatgtgcatgcagtggttcgaggtgctggacggcctgctggggaggcattggagaaacgtcggcctggccttcaactgcaccttcctactcttcggctccgtcatccagctcatcgcctgcgctaggtacgtacctgcagctactaaagccactgaagtctgaatgtactcattagtatctgttttagcgtctgttttatgtgtacaatgtgtgagtgcagcaacatctactacatcaacgacaagctggacaagaggacgtggacctacatcttcggcgcgtgctgcgcgacgacggtgttcatcccgtcgttccacaactaccggatctggtcattcctcggcctcgtcatgaccacctacacggcctggtacctcgccgtcgcctccctcatccatggccaggtagtacaacacaaaagcaccatctgttagcatgcagcatgcttgcatttctcgtctgaatagcgaggcgcatgcctgaacattattacattgcgttgtgctgaaaaaacacttgtgttttttgtatgaatatcaggtcgatggagtgaagcactcgggccctacaaagatggtcctctacttcaccggggccacaaacattctctacaccttcggtgggcacgctgttactgtgtaagccgacaaacgctctctattctatgcccctgtgtcaaaaggaatactgcacgaaatggtctcagtcacatgccacaccgtagagagtaccgtaggctgcaaattttcttttctgaaactgcacaaattcaacaagccagcacatttcagaaaagcaactacgactcgaatcaaagcatctaccccgcactgttgcatctttggcagcgaacccatgcactcccatttccaggctacacactggcaggaggagtactcctctgctcattcattcatggtttggacagtcaaaagagctatagctagcgtccaaactcgggagagcatttgctgctttacctcagggtggctcctgcggcctgcgcctgcattgctgtagatacgatgcccatcctgccatccaccacggaccacggatggacaacgccacgaaacatgcacggacaaggcacggatgtccacgtaactctgtaccgtgtacccacgctacgagctagcagtacagtaaggcaaaggcaataacgccacgcctccgctctcagtatctggtcaccctccttgcaggctcgcagttacatcgatcgtttacagcagcgtcaatactgtaataattgaccaaactgtcaaagcagtttgtgacaacattacgtgtgattttggtgcgcgcagggagatcatgcacgcgatgtggaggccgcagaagttcaaggcgatctacctgatggcgacgctgtacgtgctgacgctgacgctgccgtcggcggcgagcgtgtactgggcgttcggggacgagctgctcacgcactcgaatgcgctggcgctgctgccgcgcacggcgttccgggacgccgccgtggtgctcatgctcatccaccagttcatcaccttcggcttcgcctgcacgccgctctacttcgtctgggagaagctcatcggactccacgactgccgcagcctcttcaagcgcgccgccgcgaggctccccgtcgtcgtgcccatctggttcctcgccatcatcttccccttcttcgggcccatcaactccgccgtcggctccctcctcgtcagcttcaccgtctacatcatccccgccctcgcgcacatgatcaccttccgctccgcgcacgctcgtgaggtatagtaaaaatcttggcatctttttaatcactgcgctttttttttaaccttttggtttcacttttatcatgcgagtttactagtgtaggacttgcatgtcgcattgcactttacattggcacgccaaagctagctaggtactgattagatgccacttagcacagtggttatacatttatcaagtgagttagacgaatgctagttgggtccacccttgttcgggatggactatggaaagatgctgatacaaaaggtaaccttggttatgatcaagggtgaaacatcattagggtggtaagtattgccgctgcttttgtcgtactgaatgtaagacaaaactgcggcagtgttgatctgtcttttaacgtggcaagaaaagcaaaagggtgctagtaccaagcttagaagtagactgttgaggaaaaacaggagacagagggctcttttgtaccattcgtcctggtatatttggacgagcatcgaaccactctctttgcaagacgacacaaaaaagttcagtactactttctccgtttcacaatttaagtcattctagtattttccacattcatattgatattaatgaatctagacatatatatgacttatattataaaacggagtgagtagcaaatttagaagtcatgtgatttgtactcagtactacattttaatggagtacaagctagtagctgtgtgctctgttgttgtgatggtgtgagcctgaactgagaatcctttgtctgaatgctaaactgcagaacgccgtggagccgccgccgcggttcgtggggcgatggacgggcacgttcatcatcaacgcgttcgtggtggcgtgggtgctggtggtcggcttcgggttcggcggctgggccagcatgaccaacttcgtccgccagatcgacacgttcgggctcttcaccaagtgctaccagtgcccgccgccccctctgccgccggcgggcgccgctccgaacgccacctggccgccgttcccggcgacgccgttcaacgccaccaccgccggcctcgctccggcccctgctccttcgccggcgcatttcttcggccgccaccaccggcatcacagccacgggctctgaacactgaaatgtacgtaccagggcaatgctcgagctttggtttagctatagttgttcactagcgccgtcactaattagtcttagcttagcacaaagctgcatcttctctagctatcagtagcatgtcagtcagacggagtatcccgtttcaagttccttggttctgtactgcctcctggcgtggagctcaaaaaacgaacagaaaaaaagggaatgttgctacggccgcagatgcaagagccagctaatctagcctctttactttctct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0244600, RefSeq:Os03g0244600