Os03g0245100

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0245100| Description = Dihydrodipicolinate reductase family protein| Version = NM_001056071.1 GI:115451870 GeneID:4332231| Length = 5172 bp...")
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Gene Name

Os03g0245100

Description

Dihydrodipicolinate reductase family protein

Version

NM_001056071.1 GI:115451870 GeneID:4332231

Length

5172 bp

Definition

Oryza sativa Japonica Group Os03g0245100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7721008..7726179

Sequence Coding Region

7721009..7721167,7722097..7722334,7722988..7723121,7723233..7723307,7723568..7723669
,7724047..7724156,7724227..7724314,7724404..7724472

Expression

GEO Profiles:Os03g0245100

Genome Context

<gbrowseImage1> name=NC_008396:7721008..7726179 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7721008..7726179 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctctcgttgcggccgccttgtactctgtcgcccgcaccgtggcggagacggcgcaccctccacggagccgcggggaccccgcagcgcgtcagcgtggcggcgccttccgccatcgtagaggccgtttcgccgccggcgaggttctctttcccgatactggtgaatggatgcactggtaaaatggggttatctgtggctgaggcagtcacttcaagtggtcttcacctagttcctatttcattcagtagtagagatacgctagacagaacagtacgggttggtcatacggatgttcggatatatggtccttctgcaagagaagatgttctatcatctgttattgatgaattcccagatgttgttgttgtggactacacagcacctgactctgtgaatgctaatgctgagctctattgcaagctcggtttgccatttgttatgggcacaactggtggagataggcagttactctataaatcagttcaagattcaaataactatgcactgatatctccacagatgggaaaacaggttgttgcatttcttgctgcaatggaaattatggctgagcaatttcctggggccttttcaggctatcatttggaggttttggaatcccatcaagctggcaagctggacatatctggtacagctaaagctgtaattgcgtgttttgagaagttaggtgtgtcatatgacatgaaccggatggttaagattagggatcctgagcagcagcttgagatggtgggtgtccctgaagaacatattgaagggcatgcattccatctgtaccatctcacttctcccgatgacagtgtttcatttgaattccagcacaatgtctgtggccgttcaatatatgctgaaggatctgttgatgccgcaatgtttctgcataggaaggtacgctccaatgattccaaaagaatttacgatatgattgatgtcttgagagaaggcagcatgcggtga</cdnaseq>

Protein Sequence

<aaseq>LSLRPPCTLSPAPWRRRRTLHGAAGTPQRVSVAAPSAIVEAVSP PARFSFPILVNGCTGKMGLSVAEAVTSSGLHLVPISFSSRDTLDRTVRVGHTDVRIYG PSAREDVLSSVIDEFPDVVVVDYTAPDSVNANAELYCKLGLPFVMGTTGGDRQLLYKS VQDSNNYALISPQMGKQVVAFLAAMEIMAEQFPGAFSGYHLEVLESHQAGKLDISGTA KAVIACFEKLGVSYDMNRMVKIRDPEQQLEMVGVPEEHIEGHAFHLYHLTSPDDSVSF EFQHNVCGRSIYAEGSVDAAMFLHRKVRSNDSKRIYDMIDVLREGSMR</aaseq>

Gene Sequence

<dnaseqindica>2..160#1090..1327#1981..2114#2226..2300#2561..2662#3040..3149#3220..3307#3397..3465#gctctcgttgcggccgccttgtactctgtcgcccgcaccgtggcggagacggcgcaccctccacggagccgcggggaccccgcagcgcgtcagcgtggcggcgccttccgccatcgtagaggccgtttcgccgccggcgaggttctctttcccgatactggtacgttggatgttgaaccttttttgtgtccataggttgttcgatgaaatgccgctgtggttgcttccctttaattatggataaatcggagtttacggtaggaaaactccgttataggcttgtggcgtgtcgttccccgtccagctccttgtctaagtgatgcacattgagttagtaggcttggccacaatcgagtttttttggaggaggtattcccctccctctccctctgtctgactggcatatgagtttatttattgcaagggaggcttgtttggaagtcacacttgacattgtattcgttttaattttcatacgactatacgatgccaaccaaacagagagcaggtcgtaacttgtaatagatgtccaaaaattttctttttaatccttgaggataagcctgctcgacagtatcttatgcttttgctatttatctaggtcaattggaaggatagagatcagacaattgcgatgcaatcattaaatgaacataagcatagctgccaaacagaataaagaagtcacacatgcctaactgtagttgattactggcccaacagactctccatgtgtaattctttatggtgaactggtgagggttggccaacttgattagtactttagattgtgcagtttccatctacttgttctttaacgagaaaacttcatattttaggaaatgaagcatatttattcagacctttttattttaaggacgcacaactgtagggtgattctgtttctcaacttgtgcatattaataatgctacactacacatatcctaattacagcagttaaagttcctcttgtaccattttggctgcattgccaaatttaaacaaccacttactttttcttttggctagaaatgctattgaaatttgtactccagctaggctgacaaattgaagcttcaattatgtaggtgaatggatgcactggtaaaatggggttatctgtggctgaggcagtcacttcaagtggtcttcacctagttcctatttcattcagtagtagagatacgctagacagaacagtacgggttggtcatacggatgttcggatatatggtccttctgcaagagaagatgttctatcatctgttattgatgaattcccagatgttgttgttgtggactacacagcacctgactctgtgaatggtaaacatctttatctttgttcttttttgctctcctttttttgcatatgcccatgtaacatgcttagcgtaagttgtcgtctgtcctaagctgtcatgggctttaggccgggcgtcctaggcccattggataggattagggtttgttaggattagataaggtttgttaggattagattgagtagtcctccatctatataaggagggttcctatcctaggtcaattaggcattagatcaagatttatcttagtgcccatcggcctgccttctcagtgcgacggagagcgtcgcgccatttaggttcaggaccattccctgtttcttcatctattatagtccaatctatcggcctaaagcccatgactaaagcccatgacataagcggtcatgaaactgtacttgcagaaattccatttaatcttcttgcaagttcgtgaaaccctaggatatgtaaactagtttgctgagttggatcaaatctcgggttcttgacttgaggatagttattatttttctgtgtacaaagactgtctcctttcctccattgcccaaggaagaaccaaaaaggaaaccgctgatgtttggtttttatgtgcttctgctgattccagtttcagattgtctttagccctgattcttctgacctttgcagctaatgctgagctctattgcaagctcggtttgccatttgttatgggcacaactggtggagataggcagttactctataaatcagttcaagattcaaataactatgcactgatatctccacagatgggaaaacaggtattataaaaaatgaactatctgatatctttatcaagcgtaccactgtcatcattagacttcaaagtgatgagagcatcaagcaatattatcatttcctttcctgatcaggttgttgcatttcttgctgcaatggaaattatggctgagcaatttcctggggccttttcaggctatcatttggaggtgcaattctaccctgaatatcctttttaggaattcaagattcagaaaaaatgtgaccggcaaagatttaagcttctactttagggagcagaaatgtatcttttagttggccttaaagtagacctgaaaggatatactacataatctttgttgctggctttgcaattggtgatctgcccggggacttattttcaataattaccacacaattttctgtttgtcatttgccattttcaaattgtgaattctgaaatttgcaggttttggaatcccatcaagctggcaagctggacatatctggtacagctaaagctgtaattgcgtgttttgagaagttaggtgtgtcatatgacatgaaccgggtacgctatacacctttatgctcgacacttactgaaccacattaaccagatattgttggcacccgaccctccttgtccttgctttcaaatacttgacaatttcgctggtaataaatattttattactctatatttgcccaaatcttcatggtcccttggtttctttcaaaaaaaagtttgtgtctgtccatgctgcattcagttgagtgaggttttcattcagtaatgtaggagatgtttagatcttatggtagaagaggttggcagttggcaggtgtcattttcgccaatagcatcactttgctagttgttataaatatttccaagagcaaaagtgtactcttatttatgctgatttatacttcctatgcttgcagatggttaagattagggatcctgagcagcagcttgagatggtgggtgtccctgaagaacatattgaagggcatgcattccatctgtaccatctcacttctcccgatgacaggtaataattgtcctcctcaaaatgggattcctatattcaggtttactaattagatgttttcccctatcagtgtttcatttgaattccagcacaatgtctgtggccgttcaatatatgctgaaggatctgttgatgccgcaatgtttctgcataggaaggtttactgatatattactttgtgcaattgcttattgtacatttagttgtcaaggatattccgttttatcttactgtcttcctaatttaggtacgctccaatgattccaaaagaatttacgatatgattgatgtcttgagagaaggcagcatgcggtgaagttgatgaagtccgcatgaacaatatgtttagtctgggaggactattggactatagcatgatcatctgatgaaattagtaagtagctatctcatagtggagaagatgatgttccagtcaaactttcccagtgaacagtttgaagcaacccattgcagtaaagtttcttctagatcactgctttcaaaattgagtattaggcccctacatctccatggtaagttgatgatcgcttatcaccgttttggttactatcgattgtataatgttttctttaaaaaagttaaccgaatttggttagctgttagatgtgcttggatgtaagtattcttcagctccaaatgttgatccgactgaaactttcgtccctgacgtagaaatctattttctgtgtctgtgtctctgtttgtggttgcaacatgtgctcacagctattgcgttcatgtttaatgcagttatgcacagggctacctccttccctatcaaccatgagtacatgtgacaaggatgtacgtacctgtagggtttctccacattctgctcattgcagtggctgctgcctgaacggacaagcaatgaggagcaaaacataattgaccaagagtaagtgagcggctagacaaatcatgacaacatattcgttacatacattgtacttcaaagaagtcatacatagcaacatggaatctaatgctatgtagtacgtacccagctaatgaaacgcaacaatgccaatctaatcatcgtcctcacaaactttattgggtagaattagaaaccgcatgacctgacggggcgaaactgaatgttaccatgcatttcagtttacagcccgtatcgaactttctagtgcttgttcttctgctgggttggagggccgtagatcggggtcggcttcggcggcgcgtacaccggcgtcgtcgtggacggcggcttgtgatcgggaacggtcaccggcgccggcttgtggtcgggcacggtcaccggaggctcgtggactggcgggagcgagtgatcatggtcatgcttgggaggaacgatcacgggcgggtggaggacgatgtggtggtggtgcttgtggaaaggatcgcacaggaacgcggaggcgcattccgccgacggccggtgcaccttgccggcgagcgccacgaacgtcttcgcgccgtcgtggccgggctgctgcgccgcgacgatcatggagggctcctgccccgggcagggcgcgctcgacgcgctgtgcagccgcgcgaagcagtcctgcttcagcacgccgtcctcgccgacgaggtcggcggcgagggggacgctgaaggcgccggacttgtccaccttccccacggccattttgtcgtactcgcccctgctgttcttgcacttgacagccacttgaagacctgacacatgttaaccacattatgttggagttcatgtcgaatgtgtgtacaaaatcagtcacatggtaggtctcgtggagccgtaataatcgaactttctagccgtttaatggttgatgatgctttaatacgtactaataattatgcaagtttggagaggagcgattgtgatcagtgtcccagggtttagctttggctggattattaacaaatatcgtgtcttcgagtcactcatcgtgttggatctacttacacgtttgactacatgtatcaattttggtttccagtttataaacacgcaatttagatcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0245100, RefSeq:Os03g0245100