Os03g0245700

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0245700| Description = Very-long-chain 3-ketoacyl-CoA synthase family protein| Version = NM_001056075.1 GI:115451878 GeneID:4332236| Length...")
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Gene Name

Os03g0245700

Description

Very-long-chain 3-ketoacyl-CoA synthase family protein

Version

NM_001056075.1 GI:115451878 GeneID:4332236

Length

2097 bp

Definition

Oryza sativa Japonica Group Os03g0245700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7736071..7738167

Sequence Coding Region

7736444..7738042

Expression

GEO Profiles:Os03g0245700

Genome Context

<gbrowseImage1> name=NC_008396:7736071..7738167 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7736071..7738167 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggctgtcatggagcgggagcggctcacggcggagatggcgttccgcgacgacgcgcgggcggccgggggggagtgggcgccgagcatcgtgatcaagatccggcgccgcctcccggacttcgcgcggtccgtgaacctcaagtacgtcaagctcgggatccggcacggcggcagcgtcacgtcgtacctgcccatgctgtgcgtgccgctgctcgcctccgccgcctactccttcgtccgcctcgacgtcatctaccgctccatcgacctgctcacctgcgtcgcctggctcgggaccgccgtgctgctgctcaccgtctactacttcaagcgcccgcgcccggtgtacctcgtcgagttcgcctgctacaagccggacgaccagcacaagatctccaaggaaggcttcctcgagatgaccgagagcaccggctgcttcaatgacgccgcgctcgacttccagaccaagatcaccaatcgctccgcgctcggcgacgagacgtacctccctcccggcgtccaggcgcggccgccgaggctcaacatggccgaggcgaggatggaggccgaggccgtcatgttcgggtgcctcgacgcgctcttcgagtccaccgggatcaacccgaaacgcgacgtgggcatcctcatcgtcaactgcagcctcttcaacccgacgccgtcgctgtcgtcgatgatcatcaaccactacgagatgcgggcggacgtcaagtcgttcaacctcggcggcatggggtgcagcgccggcctcatcgccatcgacctcgccaaggacatgctccaggcgaaccccaactcgtacgcggtcgtcctcagcacggagaacatcaccctcaactggtacttcggtaacgaccgctcgatgctcctttcgaattgcatcttccgtatgggcggcgcggcggcgctgctctcgaaccgccgcgccgacgccggccgcgccaagtaccggttgctgcacaccgtgcggacgcacaagggcgccaccgacgagtgcttcaactgcgtgtaccagcgcgaggacgaggacgggaaggtcggggtgtcgctggcgcgggagctcatggcggtggccggcgacgcgctcaagaccaacatcaccacgctggggcccctcgtcctcccgctcaccgagcagctcaagttcctcaagtccctgatgatgcgccgcgtgttccgcgtcaagggcgtgcgcccctacatcccggacttccgccgcgcgttcgagcacttctgcgtgcacgccggcggccgcgccgtgctggaggaggtgcagcgcagcctcagcctggaggacagggacatggagccgagcaagtgctcgctgcaccggttcggcaacaccagcagcagctcgctgtggtacgagctggcgtacgccgaggccaagggccgcgtccagcgcggcaaccgcgtgtggcagatcggcttcggctcggggttcaagtgcaacagcgcggtctggcgcgcgctccgcgacgtgccggccgtgtcgccgccgccgaaggggaagaagagctgcaacccctgggtggactgcgtcgccaagtacccgcccaaggcgtacgtttga</cdnaseq>

Protein Sequence

<aaseq>MEAAVMERERLTAEMAFRDDARAAGGEWAPSIVIKIRRRLPDFA RSVNLKYVKLGIRHGGSVTSYLPMLCVPLLASAAYSFVRLDVIYRSIDLLTCVAWLGT AVLLLTVYYFKRPRPVYLVEFACYKPDDQHKISKEGFLEMTESTGCFNDAALDFQTKI TNRSALGDETYLPPGVQARPPRLNMAEARMEAEAVMFGCLDALFESTGINPKRDVGIL IVNCSLFNPTPSLSSMIINHYEMRADVKSFNLGGMGCSAGLIAIDLAKDMLQANPNSY AVVLSTENITLNWYFGNDRSMLLSNCIFRMGGAAALLSNRRADAGRAKYRLLHTVRTH KGATDECFNCVYQREDEDGKVGVSLARELMAVAGDALKTNITTLGPLVLPLTEQLKFL KSLMMRRVFRVKGVRPYIPDFRRAFEHFCVHAGGRAVLEEVQRSLSLEDRDMEPSKCS LHRFGNTSSSSLWYELAYAEAKGRVQRGNRVWQIGFGSGFKCNSAVWRALRDVPAVSP PPKGKKSCNPWVDCVAKYPPKAYV</aaseq>

Gene Sequence

<dnaseqindica>126..1724#acgcgtcccgctctagtgctttagccttttccattcacgccaaaggcaacctcgagttcagctcggtacgtgtcggggagagtcaagagaaagagaaagagagggctagcttagctgtgagctccatggaggcggctgtcatggagcgggagcggctcacggcggagatggcgttccgcgacgacgcgcgggcggccgggggggagtgggcgccgagcatcgtgatcaagatccggcgccgcctcccggacttcgcgcggtccgtgaacctcaagtacgtcaagctcgggatccggcacggcggcagcgtcacgtcgtacctgcccatgctgtgcgtgccgctgctcgcctccgccgcctactccttcgtccgcctcgacgtcatctaccgctccatcgacctgctcacctgcgtcgcctggctcgggaccgccgtgctgctgctcaccgtctactacttcaagcgcccgcgcccggtgtacctcgtcgagttcgcctgctacaagccggacgaccagcacaagatctccaaggaaggcttcctcgagatgaccgagagcaccggctgcttcaatgacgccgcgctcgacttccagaccaagatcaccaatcgctccgcgctcggcgacgagacgtacctccctcccggcgtccaggcgcggccgccgaggctcaacatggccgaggcgaggatggaggccgaggccgtcatgttcgggtgcctcgacgcgctcttcgagtccaccgggatcaacccgaaacgcgacgtgggcatcctcatcgtcaactgcagcctcttcaacccgacgccgtcgctgtcgtcgatgatcatcaaccactacgagatgcgggcggacgtcaagtcgttcaacctcggcggcatggggtgcagcgccggcctcatcgccatcgacctcgccaaggacatgctccaggcgaaccccaactcgtacgcggtcgtcctcagcacggagaacatcaccctcaactggtacttcggtaacgaccgctcgatgctcctttcgaattgcatcttccgtatgggcggcgcggcggcgctgctctcgaaccgccgcgccgacgccggccgcgccaagtaccggttgctgcacaccgtgcggacgcacaagggcgccaccgacgagtgcttcaactgcgtgtaccagcgcgaggacgaggacgggaaggtcggggtgtcgctggcgcgggagctcatggcggtggccggcgacgcgctcaagaccaacatcaccacgctggggcccctcgtcctcccgctcaccgagcagctcaagttcctcaagtccctgatgatgcgccgcgtgttccgcgtcaagggcgtgcgcccctacatcccggacttccgccgcgcgttcgagcacttctgcgtgcacgccggcggccgcgccgtgctggaggaggtgcagcgcagcctcagcctggaggacagggacatggagccgagcaagtgctcgctgcaccggttcggcaacaccagcagcagctcgctgtggtacgagctggcgtacgccgaggccaagggccgcgtccagcgcggcaaccgcgtgtggcagatcggcttcggctcggggttcaagtgcaacagcgcggtctggcgcgcgctccgcgacgtgccggccgtgtcgccgccgccgaaggggaagaagagctgcaacccctgggtggactgcgtcgccaagtacccgcccaaggcgtacgtttgacggttacgttttcgtgacctcgcacaaattgtatgattcatttctcctcaccaaaacacacaaaaaaaagagggcatatgctggggaagactttttttttttgtcgttttttcttcttcgcataggtttgctgtagacattgccggttattggaattcagggatttatacggcgaattgaattccaaaagctagcagtgccattcttttcagtttttgtactagcagcatttgttttacacatcctggccttctagaagttggggggaaacagaatggaggacatcacaacatgccatactacatatgactagagaacaatattgccaagtgtaaattataaacgagaaatcaatgttacacgttgtttgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0245700, RefSeq:Os03g0245700