Os03g0246100

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0246100| Description = Glycoside hydrolase, family 17 protein| Version = NM_001056078.1 GI:115451884 GeneID:4332239| Length = 2758 bp| Def...")
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Gene Name

Os03g0246100

Description

Glycoside hydrolase, family 17 protein

Version

NM_001056078.1 GI:115451884 GeneID:4332239

Length

2758 bp

Definition

Oryza sativa Japonica Group Os03g0246100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7757094..7759851

Sequence Coding Region

7757285..7757350,7758499..7759725

Expression

GEO Profiles:Os03g0246100

Genome Context

<gbrowseImage1> name=NC_008396:7757094..7759851 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7757094..7759851 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgcccagctgcttgctccgcgttggctggctaccagcggctctgtgcgcgctcgcgctcgcgctggcgcccgcctcggacgccacgtcggcgtcgctggtgggcatcaactacggccgcgtggggagcaacctcccgccgccgcaggccgtgctgccgctgctcgagggcctcggcattggccgcgtgcggctctacgacgccgaccctgctgtgctgcacgccttcgccaagaccggggtcgagctcttcgtcggcgtgcccgaccagtccctggccgggctcgctgacccgggtggcgcggattcgtggctcaggtccaacgtcatgcccttcctgccggacacaaagatcgccgcgctcaccgtcggcaacgaggtgctcacgggcaacaactccgctgtcacgcgcgctcttctcccggcgatgcagtccctgcacggcgcgctcgccaagctcggcctcgacaagcagatcgccgtcaccacggcgcacaacctcggcgtgctcggcacgtcctatccgccctcgtcgggtgccttccgcagggacctcctcccgtacatctgccccatcctcgactaccacgcgaggaccggctcgccgttcctggtgaacgcctacccttacttcgcctactccggcgaccccaagggcatccatctggagtacgcgctgctcgaggcgggctacgccggcgtcccggacccaaactccgggctgcgctacccaaacctcctcgtcgcgcaggtggacgccgtctaccacgccatcgcggcggcgaacaccgcggcggctcaggtggtcgaggtgcggatctccgagaccgggtggccctcctccggggacccgggcgagacggccgcgacgccgcagaacgccgcgaggtacaacagcaacgcgatgcggctggtggcggaggggaagggcacgccgctgaagcccacggtggcgatgcgcgcgtacgtgttcgcgctgttcaacgagaacttgaagcccgggctggcgtccgagcgcaactacggcctcttcaagcccgacggcacgccggtgtacgagctctcctacaagctcccgcgcgacaactccacgttcggtggcgccggcaactccggttggagattccccggaggtggtggcggcaatgtcagcggcggttacgacaacaacggagttaacagcggctactacgacatctcggcggcatcgccggattccgcgggtccgtgtagatggtcacaagcggcagtggcaggagcaatggctgtcctggtggtagcagcgtga</cdnaseq>

Protein Sequence

<aaseq>MAPPSCLLRVGWLPAALCALALALAPASDATSASLVGINYGRVG SNLPPPQAVLPLLEGLGIGRVRLYDADPAVLHAFAKTGVELFVGVPDQSLAGLADPGG ADSWLRSNVMPFLPDTKIAALTVGNEVLTGNNSAVTRALLPAMQSLHGALAKLGLDKQ IAVTTAHNLGVLGTSYPPSSGAFRRDLLPYICPILDYHARTGSPFLVNAYPYFAYSGD PKGIHLEYALLEAGYAGVPDPNSGLRYPNLLVAQVDAVYHAIAAANTAAAQVVEVRIS ETGWPSSGDPGETAATPQNAARYNSNAMRLVAEGKGTPLKPTVAMRAYVFALFNENLK PGLASERNYGLFKPDGTPVYELSYKLPRDNSTFGGAGNSGWRFPGGGGGNVSGGYDNN GVNSGYYDISAASPDSAGPCRWSQAAVAGAMAVLVVAA</aaseq>

Gene Sequence

<dnaseqindica>2502..2567#127..1353#gaagtacagtcacttctgccccccgagtgataagctccacagcctccaggtgcaggaggtaacttgatcagatcacctcctcccaaatcaacccacacccgtgcaatccactccgctgctcctcggatggcgccgcccagctgcttgctccgcgttggctggctaccagcggctctgtgcgcgctcgcgctcgcgctggcgcccgcctcggacgccacgtcggcgtcgctggtgggcatcaactacggccgcgtggggagcaacctcccgccgccgcaggccgtgctgccgctgctcgagggcctcggcattggccgcgtgcggctctacgacgccgaccctgctgtgctgcacgccttcgccaagaccggggtcgagctcttcgtcggcgtgcccgaccagtccctggccgggctcgctgacccgggtggcgcggattcgtggctcaggtccaacgtcatgcccttcctgccggacacaaagatcgccgcgctcaccgtcggcaacgaggtgctcacgggcaacaactccgctgtcacgcgcgctcttctcccggcgatgcagtccctgcacggcgcgctcgccaagctcggcctcgacaagcagatcgccgtcaccacggcgcacaacctcggcgtgctcggcacgtcctatccgccctcgtcgggtgccttccgcagggacctcctcccgtacatctgccccatcctcgactaccacgcgaggaccggctcgccgttcctggtgaacgcctacccttacttcgcctactccggcgaccccaagggcatccatctggagtacgcgctgctcgaggcgggctacgccggcgtcccggacccaaactccgggctgcgctacccaaacctcctcgtcgcgcaggtggacgccgtctaccacgccatcgcggcggcgaacaccgcggcggctcaggtggtcgaggtgcggatctccgagaccgggtggccctcctccggggacccgggcgagacggccgcgacgccgcagaacgccgcgaggtacaacagcaacgcgatgcggctggtggcggaggggaagggcacgccgctgaagcccacggtggcgatgcgcgcgtacgtgttcgcgctgttcaacgagaacttgaagcccgggctggcgtccgagcgcaactacggcctcttcaagcccgacggcacgccggtgtacgagctctcctacaagctcccgcgcgacaactccacgttcggtggcgccggcaactccggttggagattccccggaggtggtggcggcaatgtcagcggcggttacgacaacaacggagttaacagcggctactacgacatctcggcggcatcgccggattccgcggtgagatctactcttcctccatctcgcttgttcgtgcctgcattgcatggttcaggcattgacttgccggtagtattgtttctgaaaaggagatgacacttaatttggtgatcgcatcatgtgagcgcatgctcgtaggttgaccatggtctgcacgggaattagatgacgcgattagaaaattcgatgcaaaattaacatcagcatcagttgtcacgcagatgcagattccgcgaatcggccaagggaatcatgctggttcttgtctgaaagttcagtatgacatttccatcactatcaatctgattcgctcatgctctgaagtagagtactccagtactcacagttgctttgatcgactgagatagggctgataacccgtggagaaatgaacaaagtaattaaaatcctccacctatcctaaaatataagcatttttggactctaacacggtctccgagatactaatctgaccaacaatatatatatatatatatatatatatatatatatatatataagtaagaggttttaaatcaaaatagttgcatattatgataatttgtttaatgataaatctagtaacatcaatttacatgattgattttttttattaagggtcaaagttgaaaatatttgatttgtcactatgctaaaaatatttatattttgaaacagagggagtggtttataggtaaatctaattagcaatttaaatataagtttggaaaataaagtatggtggaaaaacccaaaatcaactatcattaagtttcaagactcgaatgtgaagcttaagctgctttcttggattaaggacgtaataatgctgctatgaacttggttaactttcacctgtctacttcttaaggtaggagctgttgggtgattcgagaacccggcacaatatccagaaatttcactgcagtactcaataatacttgccactaggaaatactgttcctacaaagttggatataggatgcagggctactaggaatgatgaaattttccttcgtggggcacaggggcagctggcagtgtttcgcatcgcgactgttctatttgttgttttctcgatgaaactatgttccatgtgctgcttcttatgaggtgtttctcgttcgtttgtgcttttgattgaaaagggtccgtgtagatggtcacaagcggcagtggcaggagcaatggctgtcctggtggtagcagcgtgagatcgtcaagtggtgtcaactctcgtcttgatggaagaaagttggggtaggtagataaaaaatgaaatggaacggcatgcaggatgctccggggccatggtattgattgccatgacttgtggtgccccagtgtttgttgtgttcgctgagaccacaatgtggggaagctaatgagtaatttggcatcagct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0246100, RefSeq:Os03g0246100