Os03g0249400

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0249400| Description = Similar to 40S ribosomal protein S20 (S22) (Fragment)| Version = NM_001056095.1 GI:115451918 GeneID:4332257| Length ...")
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Gene Name

Os03g0249400

Description

Similar to 40S ribosomal protein S20 (S22) (Fragment)

Version

NM_001056095.1 GI:115451918 GeneID:4332257

Length

1972 bp

Definition

Oryza sativa Japonica Group Os03g0249400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7935478..7937449

Sequence Coding Region

7935539..7935665,7936401..7936514,7937045..7937187

Expression

GEO Profiles:Os03g0249400

Genome Context

<gbrowseImage1> name=NC_008396:7935478..7937449 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7935478..7937449 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggtgtacggcggcatgaagggcgggaagctgggcgtcgaggaggcccacgagctgcagctcaaccgcatccgcatcaccctctcgtccaagaacgtcaaaaacctcgagaaagtttgtgcggatctagtgaagggggccaaggacaagcagcttagggtaaaggggccagttaggatccccaccaaggtgctccacatcactacccgcaagtctccctgtggtgaaggaacaaacacctgggatcggtttgagttccgcatccacaagagggtgattgaccttatcagctcccctgatgtggtgaagcagataacctccataacaattgaacctggtgttgaggttgaggtgacaatagcagatgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAVYGGMKGGKLGVEEAHELQLNRIRITLSSKNVKNLEKVC ADLVKGAKDKQLRVKGPVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISS PDVVKQITSITIEPGVEVEVTIADV</aaseq>

Gene Sequence

<dnaseqindica>62..188#924..1037#1568..1710#aatcgaagccaccgacgcctcgagcacgagcagccgaccgagacccttccgcaagagcaacatggcggcggcggcggtgtacggcggcatgaagggcgggaagctgggcgtcgaggaggcccacgagctgcagctcaaccgcatccgcatcaccctctcgtccaagaacgtcaaaaacctcgagaaaggtaagccagccggcaaaaccccccaccacagcttcgactcaatctcgtgaactgctcttaattgggcaattggtcccgtcgctttactttgcttataccgtgatactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgctaatgaatctaaacatatatatctatatagattcattagcatcaatatgaacgtgggaaatactaacttacattgtgaaacggaggaagtagtttactagtcactgtgcacctttagatttgtatgagaactgtatatagttgactggatgtgcttttggtctgtttgtcaagttgtggcatacggtgttgtaaccgctgaattatcggagcaatttaaatcttttgtatatctgttcatcaatacaatatggttggagtgtgggagagccgattggcgaatgccgttcataatatttgctcctgttactcttcattgcaaattggaccaagctgttatacccaattttgatatcttgtgtattgctgaacattttgtctgttgaggtgtgtccaatcaaggattgggctagtcaagttgggactggtctttgggttttcctcaccgtcattgtgaattgtgatcgaatatgctattacctcctatgtaatttggtatgatatactataaaaggtgctctgaatttcttcccatagacttgaatttgtcatctcatatatctatgtatttgcagtttgtgcggatctagtgaagggggccaaggacaagcagcttagggtaaaggggccagttaggatccccaccaaggtgctccacatcactacccgcaagtctccctgtggtgaaggtattgtatttctatgattccagctgctacattttttctttttgtttcaagtttattgataagagcagtagttttttaaatgaaagaaaagagtctagatataaactcaatcatgaagtgttgtagcatgtaacatgttgggctccagttatcaatcatgattctgacctttaccaaccttgaagcctctgaacgtacatgtttgtgtagcatgaacaacaaatttctggtttagtttttctgtttctctgtgaatgccatatcaaaaggttttggtcagtaccttgcacgggtacactatatcatgttagtgcttcctttttatggtcttcatacaattatctctacctttttagttgtccatgtcaaactgtagcctgttctctaatttaaggagtgcttgagctagtaatgccatgtctaacttgatttatccttcttgtgaatgctaatattgtacacctgcccattttgaatattcttgtgtcatgagattaacttcaccaaatcacattctctgtgtttatcaggaacaaacacctgggatcggtttgagttccgcatccacaagagggtgattgaccttatcagctcccctgatgtggtgaagcagataacctccataacaattgaacctggtgttgaggttgaggtgacaatagcagatgtgtaatgatgcaatgccgagattatttaccttctagttttgtgcgctagaatgtttgttgttgtgtgtcgcgtgttaaattggtccttgtgcaatggcaccttctttgttcaggagtaatctatgttgtttctcaacacacctcgatggagggtgacactctggctcagcttccgtcctgtgctgtcatctatagctgtttggtcgtttacatatcattttcacttttattctttggccccaaatgtgtgtcacgcaggatttcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0249400, RefSeq:Os03g0249400