Os03g0250000

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0250000| Description = EF-Hand type domain containing protein| Version = NM_001186421.1 GI:297721972 GeneID:9270827| Length = 3645 bp| Def...")
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Gene Name

Os03g0250000

Description

EF-Hand type domain containing protein

Version

NM_001186421.1 GI:297721972 GeneID:9270827

Length

3645 bp

Definition

Oryza sativa Japonica Group Os03g0250000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7965274..7968918

Sequence Coding Region

7968301..7968732

Expression

GEO Profiles:Os03g0250000

Genome Context

<gbrowseImage1> name=NC_008396:7965274..7968918 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7965274..7968918 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaggacgaggagctggttcgggaggaggaggaggaggaaggcgcggggagaaggcggcggcggcggaggggaggagggggaggggcagaaggtggtggtggacgggtcggagatacgggagctggtggaggacagggaggcgttcgggatgttcgcggagagcaagttccgggagctcgacgccgacggcgacggcaggctgtccgtgcgtgagctgcagccggcggtggagggcatcggcgccgcgctcgggctgccggcgcgcgggtcttcgcccaacgccgaccacatctactccgaggtacagaacgctggaaaattcttcgtagtgctgcccggcgaaaaaaaaaatcgttcagaatgctgcgccggccagccgccagacacttctttcgagaaaaacagattggttttactatctcgttaa</cdnaseq>

Protein Sequence

<aaseq>MERTRSWFGRRRRRKARGEGGGGGGEEGEGQKVVVDGSEIRELV EDREAFGMFAESKFRELDADGDGRLSVRELQPAVEGIGAALGLPARGSSPNADHIYSE VQNAGKFFVVLPGEKKNRSECCAGQPPDTSFEKNRLVLLSR</aaseq>

Gene Sequence

<dnaseqindica>187..618#agtattcctcctcctccccgtcttcgcaacggcggcaacgcaaccaaacgccaagacgcaaagcgacctacgtactagctggctagtggaagagaaaggcggaggcgtcacgagaccggtgcaagtgcgacgcaactttttctccgtcgaggaggaggagggtgtgtgtatatataggtgcggcggatggagaggacgaggagctggttcgggaggaggaggaggaggaaggcgcggggagaaggcggcggcggcggaggggaggagggggaggggcagaaggtggtggtggacgggtcggagatacgggagctggtggaggacagggaggcgttcgggatgttcgcggagagcaagttccgggagctcgacgccgacggcgacggcaggctgtccgtgcgtgagctgcagccggcggtggagggcatcggcgccgcgctcgggctgccggcgcgcgggtcttcgcccaacgccgaccacatctactccgaggtacagaacgctggaaaattcttcgtagtgctgcccggcgaaaaaaaaaatcgttcagaatgctgcgccggccagccgccagacacttctttcgagaaaaacagattggttttactatctcgttaacaacttaattaagccttgcgcgttgagaaaaacaacactagacattttttgggtgctgcttctagtatcaaagttctcagtaatcagttcaaacttagaacctcaatgaagaatgctaacagttgcacaactagtagggaagttattaccatcttgctcctgtccttctaagtcaaacacttagtaaatcgttgacatcaatttctagtaatttgtgcaatttaacaacgattttgctatatctcacttgaaagtttttttcttatctctcacttgattttctcactcaaatttacagtgcattttcttgtaagttacagtgtaatttatgaaacttacactgtaacttttgtaagttacactgtaatttttgaatcttcgcatgtaaattttaaattttgtattggatttggtctttttcttgaggatatggtaatttagtgtccattatggtgtttcttaattgttttttgctttttattaaatctatcggattttaatccaaagattaaaaatctgtgtgatacgatcataaaaatcttttgaaagatgtataggtactcccatttaacaacacgtaaattgtatgttatgaaagcatttctcatggtgcatcttaaaaacgtaatcttattacgttaaactatattaacatgaatttttataaattaatggtcaaaggtattcacctttgatttaggacaaagctaaaacggcaagtaatttaaaacgaagcaagtacctttatgtaagtctgttctcctgagtttggtattaatgaatcgtacatatgtgaatacatatgcaccttgtatagttggcatgtaatgcggttcttgagcaaatctttgtaatttgtcgagtagaaactgtttttgacaagtagacgtgtcaattattgaatcatagtattattgctttcctagaaataattgctcaattattgcaaggagtactagtatttatcagacaacctgaaagagacatggtcttatcgcaaaagaaaatgaggatagaaaaactgtggctggtgtatttagcagatcgatcatatggtaacagcctagatttttattgatatctaatctgcctcagtactaaagcgtttgtcagcctgaattccagattggcagaaaagagactttaccatgcaatgcaggatgagggcttgcccacaggtccatgtcaagatgccctgaaccagagttaagcttgccattggagaacctaaaacgtcacagtccaaacttccaatatctttctgaagcaatgacagaaattcttgtgtcccaggctcccagccaatttgttaaaactttcttatgccggctttcacatcgtagttgctgagtcctacttcagacaggaacaccaatgcaactatgcaaatagcattctggcaaatcatgttcttttctttttgccatgtctgatatttcttgaataatccactagcagcatcttctgccgatggcaaccactggttctacggagataaaagtccagatttgtcggcctatttgtttgttctgttcatcgattagtggtagtgaactagtggccaggcattcttctgtactagttcacaaacctgacatgcatgcaggcaatcagcgagctcactcatgggaagaaagaggaggtgagcaggacagagttccaggaggtcctgtccgatatcctcctcggcatggcggctggcctcaagagggacccgatcgttatactgcgcatcgacggcgaggacctgagggactttgttgacagccccaggtatgagccagaagctgctgccatcttctcaaagataggttctgaagacatgtctctgcgtcagtgcctgctagctgctcttcagctgctgaatgtcgacaacggaatgccaccagcttctgacccttgggtaagtcaactggatgcttccatggtgatattaatcatgacaaaatgtagctgtacgtatcaatcgaatcgtggggattgttattgagaaaatatatctgtgtggcattaacaggttgcagagaacatcatagagccggcattgcagaaactccctgccggccagcttgagcaaccggcctcgcaagatatcttcttagaacagctcaagaagctcctgagcaacatcgctgaaaggcttcaggagcagcctgtgattgtcgcacacaccgagaacacattcgacggtagttgtgtcaagaggctgctggacaacaaattcgagctggacaaggtatgctaaactgtggttcatccttaggttcttaactttttatacaggttattggtcaatgacaatactgatctatggtgcatcactttgtttgtatgccagttgttggattctgtctggaaagatgtactcatagagcataagaacaaaggatccagggagtgcctgatagccgcactcgataagatggcagatgcagcaggcttaccaccttacggtgccgttaatcaggtaaaagccccaacctttactagctttgcatctcaatttttttagtcaataacacaaccatggtatttgtggaatatctcaggtggatgccgtggtgaatgaggcgctcaagacagttaatgctgatgaaagaacagcggtagacgaggccgggttcaagaaactactgacagatatccttagggcagtgatgatgcagctgaacagacagccgattttcgtctcgaacagcaccgtagttcacgagccattgttcagttcatccgcaattttatcctcgcctccagtgaaatcatcgccgagtgaataaattaaaccatatatgaatgttaatgtgcttgacagtggtctatctgtaagcagtgcctgtgatgttgcttttttgtctgatcaagcactgcgggggcatgtatagactggctacaacctgacgagatgtaaagaacacttccgtcagtcttgctagcctgattgatgtataagtttggaataaggctttcaagctatacagattgatcaatggcaaatgcaactattttgcagtttgcattcattggggg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0250000, RefSeq:Os03g0250000