Os03g0250200

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Revision as of 12:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0250200| Description = TB2/DP1 and HVA22 related protein family protein| Version = NM_001056101.1 GI:115451930 GeneID:4332263| Length = 497...")
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Gene Name

Os03g0250200

Description

TB2/DP1 and HVA22 related protein family protein

Version

NM_001056101.1 GI:115451930 GeneID:4332263

Length

4974 bp

Definition

Oryza sativa Japonica Group Os03g0250200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7979675..7984648

Sequence Coding Region

7982393..7982893,7982972..7983035,7983119..7983175,7983266..7983364,7984271..7984302

Expression

GEO Profiles:Os03g0250200

Genome Context

<gbrowseImage1> name=NC_008396:7979675..7984648 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7979675..7984648 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgggcggattcctctcccgggtcctcctgttggcctttggctacgcctatccagcatatgagtgctacaagactgtcgaactgaataaaccagagattgagcagctcatattttggtgtcagtattggattctagtagctctgatgacggttatggagagatttggagattttacaatatcatggctaccattttactcggaagcaaagctgatgttctttatatacttgtggtaccctaagacaaagggaactacctacatttatgggactttctttaggccatatatttcacagcatgagaatgaaattgaccgtaatttgcttgagttgagagctcgagccaccgatgtagttgtcctttattttcaaaaggctgctactgtaggacagaatacattctttgacgttttgaagtatgttgcttcgcaatcaccatctcagaggtcaagtcaacaaccttctcaggtactaacatgcttctcttcttcaaagctgttcactgaacaaactcatttgcttttaaccactggaattaccgaattcaccatttctgtgcagtcgctaatgctcaagttttccggtgctcttctaaagcaattctatccatgttgtcttgctagtttgttagctatatgttttttttttatgcaagacgcctttactattactgcagtactgccatcacatgtagacttggtgtctgcagctactttctctataaactatagaaacaggaataatttataa</cdnaseq>

Protein Sequence

<aaseq>MMGGFLSRVLLLAFGYAYPAYECYKTVELNKPEIEQLIFWCQYW ILVALMTVMERFGDFTISWLPFYSEAKLMFFIYLWYPKTKGTTYIYGTFFRPYISQHE NEIDRNLLELRARATDVVVLYFQKAATVGQNTFFDVLKYVASQSPSQRSSQQPSQVLT CFSSSKLFTEQTHLLLTTGITEFTISVQSLMLKFSGALLKQFYPCCLASLLAICFFFM QDAFTITAVLPSHVDLVSAATFSINYRNRNNL</aaseq>

Gene Sequence

<dnaseqindica>1756..2256#1614..1677#1474..1530#1285..1383#347..378#ggagctcgagctgacggcggacgtgctcgcctcttctccggctctctctctcttctcctcctcctcatctcggcaaaaccaccaccgcattgccggtatatttagttaagccgcgatagaggagggagggatagcgtagagggagagggaacaggggagggtggcgagctcctgaccatctctctccgccctctccgtttcgccgctcctcgccggatccatctccaaaagaggtttcttttgcagattcttttgcgtcctctcttggaaattcgttgctgctgatggtgtgttctgattcgtgtcggttctgttggatctggatgtgcgcaggacgtcggagaagatgatgggcggattcctctcccgggtcctcctgtaagcatttccctccccttccccctgaatcttgaaatgtgctcttgcgaagttgatattttgggtatggaagttgtcaaaggcattgggtctccggttttggtttcgttttcttgagatgaggatgcatgtgtgtccattcggagggcagagtctcctttacttttttgtttctctgttctttcacccccccccccccctaatagtatatgctattttgtttgaaaacaacaaatcgcgagatgcgtttcttcgtgtcgatttgttcacctgattcttcggcttgaaatcgggaggtgagagcccgctacgcattcgaaaaatatatgatgtttattgttcacgaggaggatgggaccaaattttcaatgcattgcacaacggtcaaaggctttcgtttattcttaacagattgattctttttttcaagattcctgtcgcatgatcttgtctatcggaatctaagaatggataatgattctgacgttctgtactattagctgaagctcagtttttaggctccgatttgaacaaataaacccgaaattcagaagctttgttcttttggcatgcttcatctgcagttgttctataatgtaagcctgatcatgtctcgtagatcaagatgcgtattgtgagttctcctctttaatgcaagtgcgttgaaaatttagcctcttcaatgatgctcagatgctcaattcaacgcaccctcgaaatggtcaactgctcttctatggattagtttggagcgcaacaaaaaaaaaacaagaaaaaaaaagagcaatcgttttcctctaaatcattttactcggaaagaatgtacatacattttgtttatggtctggataacaaatagagcatggatatgtcatttatgatctggcttatgcctattgcatgtaggttggcctttggctacgcctatccagcatatgagtgctacaagactgtcgaactgaataaaccagagattgagcagctcatattttggtgtcagtattggtaagatgattctttcatctttgatcatgacattatccttcattagtatttgcgagacatttagcttttatttgctgtgcctgtgtctaggattctagtagctctgatgacggttatggagagatttggagattttacaatatcatggtaagactgccaacgtttgcatttttcatctctttttaacagtctctaacattagttgcaccatgcatatgatcgtgttgaaggctaccattttactcggaagcaaagctgatgttctttatatacttgtggtaccctaagacaaaggtactcgatttgtcacctatagcttctatttttagatgttttttctgtacattggattgacatttgccttcattgtagggaactacctacatttatgggactttctttaggccatatatttcacagcatgagaatgaaattgaccgtaatttgcttgagttgagagctcgagccaccgatgtagttgtcctttattttcaaaaggctgctactgtaggacagaatacattctttgacgttttgaagtatgttgcttcgcaatcaccatctcagaggtcaagtcaacaaccttctcaggtactaacatgcttctcttcttcaaagctgttcactgaacaaactcatttgcttttaaccactggaattaccgaattcaccatttctgtgcagtcgctaatgctcaagttttccggtgctcttctaaagcaattctatccatgttgtcttgctagtttgttagctatatgttttttttttatgcaagacgcctttactattactgcagtactgccatcacatgtagacttggtgtctgcagctactttctctataaactatagaaacaggaataatttataagtccattttacacaaccaccaaggtcataggcctttgtactgagcatcggcatgaggtgtgagcatataagctttctagaaaagccaccactaatttgctgagtctgcaagctatatgttggtttatagtaccatgttaaagtttctttatgactgattttagatatgcacatcctagatttttttttatttttatttttgcaattactaagggcccgtttggtagagctccaactcctaaatttaactctaggagttgggtctggaatagagttgtggagcagtctaaacccggctccacctctctagttcattttgtgagagcgttgcacccagctctactcccattttaggtggagttgaaactgtttggctgagcttcagctccaggagaggtggagctggagctatgccaaacatgctcttacacacatcctagttaatggtatggtgacgtaaaaacttcttcctgatttcatcgagctatatatgttctaaaaaatatgtgtgcatatctgggattacaatatacaccttcttgggaacatccatatctaatccttggtaatgcaacaatgtctctttctactgctacataaacacatgtccaatttgaccgggagtattaatatgacaatccatttggcattgtgttggctttggaaatgagtcaattactacttcctccttttcttttcatactctgtacattgtaattagttgaaagtgtgattgtttagtaactgaatttaacgccccctgaaaagacaaaatcttattggaatgaaatatgtgtttaagcatcaaagttttacagcctaacaggtcagcaactgcaaactggcgactagattttcgcaaggtttctaaagggttcggtagcattatctttcaacactagttgggctgtacaatgctcatgagccaagtgagcaaaaggcttagggcatgatagctttttccttttttttctctttttggaggggatgaggggttgtggatgatgggtagcatttggcgtatgaatgtactgaataactgttatgcacctaacatatttacaccttatcatgtgctgagcacttattgacccataacataaacctatcaagtctcaggcttgtcaacaagtttaagtattgctcccggtaacttgagctgttgagccttccaactacacaacctagagttgagctaccaaccatatctcatctgtaggataatcacaaataacactatcccttgacagttgcaacaacaattggttctaaaaaataaactacactattcattatcactttgacttattgctgttatatttccaattttataactagatagagtaggaaagtatatagtgcaaactgtccagtcttaagctgtcgtcatcttatccaaaatttaacgttcctcccgggcaacaaggagtacagttaaatttctctaactatcatctggtgcagttgcctatatttgcattataaatcagaacagtggtgacatcgatctttcttcatttaggagtaattattcagttttggatacaatgataggcttaaaaattcatgtgaccaaaaaaacctccactgtatgggttttcatcgtgtacattgaaagtgaatgactagaaaggagattcgatataatatattgcttggtgaattgttgtcgatacttcattaggatgtatgtacctgaaaagcttctcagttgtcaatttaagagaagccatgcaaatcaatactccctttcatctcatgtcatagaattaaccatttgaagtagaataactaattatccacgtgttccctgctcttgcttctttttctttctctttttagttccagctactcatgtatttaaaaatctgaaatcttgctccgattccctgcaggagccgcaacaaccaaaacaacagcaggcaccagtacagcagcagccgacacaaaaacaagcaccaactgttttgcgcagatcagcatctattgctgctcggcaagctgcaatggcacagcagtctcaggatgccaagacggttccatcttcccccaagatcaagcgccaagcatcaacaaaagctgcacctgtggcatcaacaaagttgaccggagctgcagctccgtcaacaccaaaatctgatgccgacgcaccaaagaaaaatgaggcggcgccagcttccttgcaagtggcaactccagcaacaaaggccgatgtaccagcatctgaacctagtgctccactccctgaagccgaagaagctgacaagatggccattgacgaggctgatgatgccgtagagggcacagaagagggtgatcctgttccaggtgagacagtagaggagagaccaatggaggagacgatccgtgtgactcgctccaagctaaggaggcgtactgcttctgaggatcctgcaggaaattaacagcaatccattctttttgttgcatgttgtgctgttcattttctttttaagttttagattgtcatgttgtttggtgcatgtgggaaatgtgttggtctaattgatcgttctgttgcccaagagtttgtcatctcgttttctgtgttgctagcatgtttgtgtgcttggaagttgtaaatagcaccgtgcatgtatgtatatatcaattggtggcatggcgaggaatgcctgtatcttgaaacattagacatttcaatcaggtcattacatgagcactctctctgttgtctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0250200, RefSeq:Os03g0250200