Os03g0254200

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0254200| Description = Aromatic amino acid permease family protein| Version = NM_001056120.1 GI:115451968 GeneID:4332283| Length = 3643 bp|...")
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Gene Name

Os03g0254200

Description

Aromatic amino acid permease family protein

Version

NM_001056120.1 GI:115451968 GeneID:4332283

Length

3643 bp

Definition

Oryza sativa Japonica Group Os03g0254200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8181075..8184717

Sequence Coding Region

8181075..8181458,8182515..8182929,8183457..8183594,8183690..8183849,8183981..8184113
,8184201..8184347,8184460..8184717

Expression

GEO Profiles:Os03g0254200

Genome Context

<gbrowseImage1> name=NC_008396:8181075..8184717 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8181075..8184717 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaggcgccatcacgcgcgcccgcttgcagcaccgcccagctagattccaccgcgccccgtaccggtgcatcccagtgacgaccacgacatgcttgccggaaaggagagtccatcgcggcggcggcgtccagtggtgcggcagtagtgcagccaccggcgagagggcccgggccgtctccgaggtgagagcggcgggagcgcgcggcggcgacgcgcggccgccgcctcagggggagggagatgtggcggcgggcgtggcagaggcgccgtcttcgggcggtggcgcgaagcgggggagcgtggttggcgccgccgcgctcgtggtcgggaccagcatcggctccggcatcctcgccgtgccacagcgcacggcgcccgcggggttcgttccgagcgcggcgtgcatggtcacctgctgggcgttcctggtgatcgaggcgctcctcctggtcgagatcaacgtccacctgcggcggaagaaggggaaggacgccggcggcgacggcgatggcggcggcggcgggcagctggaggtcatatcgctgaagagcatggcgcaggagaccctgggcgagtggggagggaacctggccgccgcggcctacctgttcctgtcctacacctccatggtcgcctacacgtccaagtctggcgaggtgctctccagcgtggtcgccggcgttcccgagcccgtctccggctgcgccttcaccgccgcccttgcgctcctcatcgccgccggtggcacgggcgtcaccgacaaagtgaaccagctgctcactttcgtcatgataggattactgctgacgatcgaggtgtctgcagtagcattcggtgccggcctgaccctgccagctaacaccaactgggagcaggtccctgcaacgcttccggtgatcatcttcacgctggtcttccatgatatcgcaccagtgatatgcgcgtaccttggaggggacctcgtgaggattcggctctcgatactcgtcgggagcatcgtgccattgctgtccttgctcgtgtgggacgacatcgcgctcagcatctccacggatcttgatgggtttgacatcctggatatgcttaatacagaatggagttatactgttgtggagacgttctcactccttgctgtcgggacgtcgctgatcggaacactgctgggagcttcacagttcttcattgagcagatgaccaatcttgtctcttcttcagcccaaggacatgaagaagaagcattaaggcatcgtggagcgaaaacggctgtggacaacaacaggctcagctacatcgctgcaggggctgtggttgccccaaccgtgctaattgcagctaccgttccgaattcattctccattgctactgacattgcaggcggttactgcatgaccatcttgtatggcgttcttcctccattgatggcgtgggctatcgcctccaggatgtcagattcgagagctggatctgtcgaagcggaatcatctgtcgccggtggcagtggcaatgtggacttgactagtgcaaagccagttttagtagggatgggggtgttctctgtgctcatggtctttgagcaaatgtcccaagatttcgttagttttcagtcctatctccttgcatggacaggctag</cdnaseq>

Protein Sequence

<aaseq>MQGAITRARLQHRPARFHRAPYRCIPVTTTTCLPERRVHRGGGV QWCGSSAATGERARAVSEVRAAGARGGDARPPPQGEGDVAAGVAEAPSSGGGAKRGSV VGAAALVVGTSIGSGILAVPQRTAPAGFVPSAACMVTCWAFLVIEALLLVEINVHLRR KKGKDAGGDGDGGGGGQLEVISLKSMAQETLGEWGGNLAAAAYLFLSYTSMVAYTSKS GEVLSSVVAGVPEPVSGCAFTAALALLIAAGGTGVTDKVNQLLTFVMIGLLLTIEVSA VAFGAGLTLPANTNWEQVPATLPVIIFTLVFHDIAPVICAYLGGDLVRIRLSILVGSI VPLLSLLVWDDIALSISTDLDGFDILDMLNTEWSYTVVETFSLLAVGTSLIGTLLGAS QFFIEQMTNLVSSSAQGHEEEALRHRGAKTAVDNNRLSYIAAGAVVAPTVLIAATVPN SFSIATDIAGGYCMTILYGVLPPLMAWAIASRMSDSRAGSVEAESSVAGGSGNVDLTS AKPVLVGMGVFSVLMVFEQMSQDFVSFQSYLLAWTG</aaseq>

Gene Sequence

<dnaseqindica>1..384#1441..1855#2383..2520#2616..2775#2907..3039#3127..3273#3386..3643#atgcaaggcgccatcacgcgcgcccgcttgcagcaccgcccagctagattccaccgcgccccgtaccggtgcatcccagtgacgaccacgacatgcttgccggaaaggagagtccatcgcggcggcggcgtccagtggtgcggcagtagtgcagccaccggcgagagggcccgggccgtctccgaggtgagagcggcgggagcgcgcggcggcgacgcgcggccgccgcctcagggggagggagatgtggcggcgggcgtggcagaggcgccgtcttcgggcggtggcgcgaagcgggggagcgtggttggcgccgccgcgctcgtggtcgggaccagcatcggctccggcatcctcgccgtgccacagcgcacggcgcccgcggtgagtcgccgtactaccctacacctgacgagcctattgctagcatcatcacaatcagaatccctaaaacgaacgatcgcctgcgccgatttcgacatgtgatcaacacggtgcatgattttagaggaagacaacgcgaaaaaatcgatggaatcaatcaccctctcatcgtagtactccctccatttcacaatgtaagtcattctaacatttctcgcatttatattgatgttaatgaatctagattaatgaatctaaacatatatatttatctagattcattaacatccatataaatatagataatgctagaatgacttacattgtgaaacggaggaagtatattcatatctcggaccggtgacaggtccctctcttgccttgacctttccacatgacaccgaaagattatactactaatactagtctacaacgtacggtgaagtaattagtgatggcccatctatcaggattcaggaccatgaatttggcacggaactgacaggatatctgatcgccaaaaatgaaagtagtagcagcagttctagtagtactatcatgagacagatctgaagtagccgtccacatgtaccccccacaaacagctgaatttctctgtctttgttgtgaggagtagttacgagcattcaaggttcacttggttaattgtcgacccaccaacctcaagcattcttgatctggcaaattcgtaaaaaaaaaaaaaaatctcccgaacagaaatggaacaagaagaaaaatctgaacttgaacttttcctttgtatggtggatgtttaagttcttgtcgattactcatattctccaataaatcaaaacagtttattataaaataaaaattagtttataggtaaaatttttatatacatgtttttagagatttaaaagttaatacttgaaaaaaatgcattgaaaatatcttaaaatcatcttaaaaattaagttttaagaaaataaactttggctttaacttattaaggtccgccgatgtgactcttactagggtcgctggcattgctgatggtcgtgcaattggcaggggttcgttccgagcgcggcgtgcatggtcacctgctgggcgttcctggtgatcgaggcgctcctcctggtcgagatcaacgtccacctgcggcggaagaaggggaaggacgccggcggcgacggcgatggcggcggcggcgggcagctggaggtcatatcgctgaagagcatggcgcaggagaccctgggcgagtggggagggaacctggccgccgcggcctacctgttcctgtcctacacctccatggtcgcctacacgtccaagtctggcgaggtgctctccagcgtggtcgccggcgttcccgagcccgtctccggctgcgccttcaccgccgcccttgcgctcctcatcgccgccggtggcacgggcgtcaccgacaaagtgaaccagctgctcactttcgtcatgataggttggtaagctatcgttgtgatcaacacttggaacagccaacggtactaaataccacattgtttagatctgcattaatacgcttaaatgacaaattttggcatctgcagccgtcttctttcagaagaaattctgctgtctgaacatctccaagctaattaagcaagaaaaagaaaatgtgactttaaagatggtagcagcatatggaacagtaactcgtttctgaaattgtgaaaacagagatgaacaaacactggttcgcccaactggaattcaaagatggcatgtagtggagtagtaactcatttctgaaagtgtagagacaatgacgaacaaacacccactctccccactgggagctccatactacttgcaacacaatgcactgtgctgaagtaagagcaaacctactgtagctgataaccatattacatccatacacctcatgttcttgctgtcatcaacgtgatctgtcttgcgcactagtactaagtactaactaccatcgtgatctgtctactgatgcaggattactgctgacgatcgaggtgtctgcagtagcattcggtgccggcctgaccctgccagctaacaccaactgggagcaggtccctgcaacgcttccggtgatcatcttcacgctggtcttccatgatatcgcaccaggtacatgcaatgcaacttatgtaatcatcccacggatgaaatttgcaacttgcaagaggtacaagtactgaagattcagtgtgcaattgtcgcagtgatatgcgcgtaccttggaggggacctcgtgaggattcggctctcgatactcgtcgggagcatcgtgccattgctgtccttgctcgtgtgggacgacatcgcgctcagcatctccacggatcttgatgggtttgacatcctggatatgcttaatacagagtgagcgtctccgctgtagcactactgcactagcaagaacacgttgtgtacagcttcacctgcaatctgcttctctgtatgaagctggaggcgttgaatcctaacaggacaaaattttctttcttttgtagatggagttatactgttgtggagacgttctcactccttgctgtcgggacgtcgctgatcggaacactgctgggagcttcacagttcttcattgagcagatgaccaatcttgtctcttcttcagcccaaggacatgtatgcttcatcagccagaggacttgcattaatttatatctaagaacaatctgttcagttttatgaacaaacaatcgatgagtgcaggaagaagaagcattaaggcatcgtggagcgaaaacggctgtggacaacaacaggctcagctacatcgctgcaggggctgtggttgccccaaccgtgctaattgcagctaccgttccgaattcattctccattgctactgacattgcagtgagtgtacaccaatacatgtgaaatccttcagttcttgccatcctagctagcatggttccgacacttacagaagattaattacttggtgggttgatttcctaacgttcagggcggttactgcatgaccatcttgtatggcgttcttcctccattgatggcgtgggctatcgcctccaggatgtcagattcgagagctggatctgtcgaagcggaatcatctgtcgccggtggcagtggcaatgtggacttgactagtgcaaagccagttttagtagggatgggggtgttctctgtgctcatggtctttgagcaaatgtcccaagatttcgttagttttcagtcctatctccttgcatggacaggctag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0254200, RefSeq:Os03g0254200