Os10g0183900

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Revision as of 08:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0183900| Description = Ribosomal RNA adenine methylase transferase family protein| Version = NM_001070792.1 GI:115481327 GeneID:4348215| Le...")
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Gene Name

Os10g0183900

Description

Ribosomal RNA adenine methylase transferase family protein

Version

NM_001070792.1 GI:115481327 GeneID:4348215

Length

5390 bp

Definition

Oryza sativa Japonica Group Os10g0183900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5411532..5416921

Sequence Coding Region

5411679..5412017,5416021..5416776

Expression

GEO Profiles:Os10g0183900

Genome Context

<gbrowseImage1> name=NC_008403:5411532..5416921 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5411532..5416921 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggcgggaagatccagaagaagcggcacggcggaggagcaggcggcggcggcggcggcgggggcgggggcgcgcggctgcagggagggatcccgttcgagaagtccaaggggcagcacatcctgcggaacccggcgctggtggactccatcgtcgagaaggccggcctcaagcccaccgacaccgtcctcgagatcggccccggcacgggtaacctcaccaagcgcctcctccaggccggcgtcaaggccgtcgtcgccgtcgagctcgacccccgcatggttcttgagctcaaccgccgcttccagggcgaccctctcgcctcacgcctcaaggttatccaaggagatgtccttaaatgtgatcttccatactttgatatctgtgtggcaaacatcccatatcaaatttcatctcccctcacattcaagcttctgtcacaccgcccaatctttaggtgtgcggtgattatgtttcaacgtgaatttgccatgagacttgtagcacagcctggagatagtctctactgccgtctctctgtgaatgtgcagctcttgtcacgtgtgtcacatctcctgaaggttggacggaacaacttcaggcctccacccaaggttgattcatcggttgttcgtatcgagcccagaaagcccctacctcctgtcagcttcaaagagtgggatggacttgtgaggctttgtttcaaccggaagaacaagacattgggtgccatctttaagcagaagcgtgtccttgaattgttagagaagaactacaagacaatgcagtctctacagctcacctcagatgcagaaaaaggtgaggagaagatgtcaccagatgatgttgcattgctatcaagtatggtcgatgacatgaacatggaaagcagctacgagaatgatgatgatgatgagatggaaatggatgatgccgatatggtagtagagagccgtgcatgtttcaaagaaaagattatggggatattacagcaaggagattttgcagagaagagagcatcgaagctcagccaggttgacttcttgtacctcctgtcgctcttcaacaaagctggtatacatttttcctga</cdnaseq>

Protein Sequence

<aaseq>MAGGKIQKKRHGGGAGGGGGGGGGGARLQGGIPFEKSKGQHILR NPALVDSIVEKAGLKPTDTVLEIGPGTGNLTKRLLQAGVKAVVAVELDPRMVLELNRR FQGDPLASRLKVIQGDVLKCDLPYFDICVANIPYQISSPLTFKLLSHRPIFRCAVIMF QREFAMRLVAQPGDSLYCRLSVNVQLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRK PLPPVSFKEWDGLVRLCFNRKNKTLGAIFKQKRVLELLEKNYKTMQSLQLTSDAEKGE EKMSPDDVALLSSMVDDMNMESSYENDDDDEMEMDDADMVVESRACFKEKIMGILQQG DFAEKRASKLSQVDFLYLLSLFNKAGIHFS</aaseq>

Gene Sequence

<dnaseqindica>148..486#4490..5245#gttagccccagaaggaaggcgaaagctaagacccctcccttccattcttcccaaaccctagccgccacttctctctccccgcctccgccctctcccaattcctcctccggcggcggcggcggcgttgggacgcgcgagcccatcaccatggcgggcgggaagatccagaagaagcggcacggcggaggagcaggcggcggcggcggcggcgggggcgggggcgcgcggctgcagggagggatcccgttcgagaagtccaaggggcagcacatcctgcggaacccggcgctggtggactccatcgtcgagaaggccggcctcaagcccaccgacaccgtcctcgagatcggccccggcacgggtaacctcaccaagcgcctcctccaggccggcgtcaaggccgtcgtcgccgtcgagctcgacccccgcatggttcttgagctcaaccgccgcttccagggcgaccctctcgcctcacgcctcaaggtaaaattctcatggtctcctctcttcattttattttttctctccagttttgtgtgattgatggaacgattggattatgttaactttgcaaggactagtgctacttcctgttaataataatacggatgcttaggcatcttgaatttgcttgtagtctggttcggtgacagcgattcaggggattcggtggtgggttgcactgtaatttagagtaaattacaacattgggctacctacttttaccaatgttgcaacttggaccagggtggaaacaatattttcacattggactgcttgtcctatgcaaatggtttcactttggaccatgtccatcgatctgttccggttgatctgcccctcttcgttctttcttctccatagagccaaaggcaccagtcaccggtgattccttctacatagagccgaaggcatgagcggtcagcaaggtccaatttactcctcgctagcaggctctctagatgcaaatccatgctagagtcgcagcatttctcataaccacagctgtcgtatatatgtcaccttgctcttattcccatccaattcgtaatgctggagtcatggatgagcaccgttgcttcgtaggatagtactcttcctgtataagaataatgcttttttgtttctacatccttccagtttccagatcctttctcagggtgagagcagtgctcaaactcgacctctggccggtcgacacaggggctgaccaagcttgaatacaaatgaggatcaggatagaactcaagcaacctagagagatttcatggtgttgaacagaagcatcttcatctcaacatggaagaaagggagaggagagatggagaaaaaaactagtccaattcgaaacttttgtttagttacctgtccaaattgaaaagattgagccctagtccaagctgcaacatgggtaaaagtacgtggcccaatgcacaattcactcgtttgtattattcagattgaaaaagattgaatttctgaggatgctggggaattcagagtggtgtaatgtttgtgcttagagtgtagatctattagtgaagtttcctctgctgagtttctttacgcattgtaccttacagtatttggttcttgtttttggtaacgggttagagttttaggatttggattgttaaaatgctgcatggtatttgcttcagtgtgagaggatgccttttcaatgatctgaattggtaagtgctggaagagtaggtgtgtcccatgtgttgtggggctgcctgtattttgcatgcttcattgatgttctgtttatatggatacttttcaagattctaggaaatataatgtgccaagactgagtatacagtcgtctcaaaaagcaggcccccatagacattgttagcagctccccctcatgtacaacttggggccaaagttcccatagcctaggaaattttgacagaaaaaatgtaggctcttgtggtgtgtatctggttgaattgattgcagtgggaatcttgaagatctctagattggcaaagaatttggttaagaataaactgaatgtgctggcagtagggttagttttgagggtgtaaaagggatttcttttcatattttttttgggtgttgttttttcgtgtggttgggggaaggggatcataaaaatgtcagtcattaggcggtgggatgggaaattcacaatcagcaccaccactactttcttttaaaggagtaaaggaataacatgaatagaaaacaaagaaaccttggtcaagcatctactgtagaactgtacaactagacgatggaattgtctatgctccaacactgcaaagtggcagtactgttgttgtgtttgtacaatacatttaaagaactaagcaagtgtttggttcttttactgtttatataatggtattgtttggacagaccaacaatggtagtgccctttttcaatctgtattctgtcatggcattgggccaacaggtcagcccaagggtaacccaggaccggtcgagagaacgctatcctcacctcgtacacagtaccatagctcagccggttatcagttctagtctgttggatagttgtataggattaaactgggtccttccctccgtctatataaggatgtactgtattgtcatttagattaagaaatgaagaagaattaatctaatccctcccaatgttcttctccacaaagtctaaatgccatccttagcagcggatgcctcccagccatcctcctggctacattccctgtgtagacataccatttcttgttaagaggaaaggtaatagaactaaacaaaatacctaagaataatcagcaaacattgatacatttactcctttaaaagagagtagtgctggtggtggttgtgaatctgccaactcacatgttctacagtgcatttttatgaatgtccgttctattcttcaatatagaaacggtccctttcatatgatcttctcttatttcactatagaataattccaatttcataccaaaaggttcaagatgaccatattgccatgtatatatgtaagtgtatgagctgattttgttagtagagtctgcaaacactatcaaatgctccttgtaactgtgaaaaaaatgaaagacaagtttgatggaaaagtaacaaccattttgttttggacaatatcaaaatatgcatgatcgcatgatatctgtagttaagacttaagtcatgaccatttagctagtaataatcatcaaagtagtgatcttacttttttaggatggtttagttttggatgttttaataaataattatccatagtaagatgataaagcttgaaccttggaaatcaaatgtgaggctaacatgcacaatgtttctgttgatgcatctcctgtcatggtccaaatccatgatgggtaaacactgccggaggatagttgggcggccatggcagcttgcgaccaagaaggcacttaggttgggggtgaagaacattgagggagggattaaattaattctgattcactgcctaacgaaaatagataaactcccatccttttatagattgtacgacttgatccctgagtaagactaaatgtaatctttgtccctgactctaactgatgctacagtaatacgagggcactgttcacccctttcccaccaggtatttagttgcccatgggcgttggcttcttagcctgatactgatgacatctttgacctgtcagaaactcagcctaatgaaaaatagatacactcgcatccttgtatagattgtatgacttaatccctgagtaagactaaatgtaaaatcttgtccctaactcttaactgatgctacagtactgcgaggtttacccctttcccgctgcccatggacgtgggtttcttagcccgatactggtgacatctttgacctgtcagaaactcagcacgttagcctttgtatcacataccactgtttaatgactgatgctattttccaataaaaaaaatcatgttatcatcaccacaaataaaaattttcaacagtgatatgcgtatacgcacttcatccaacatgaatggacaaagaacaatcacagaaggggtgggatggaatttgccgaatgccgtattacggtggggtcattttattttacatgatatatggagcacaatactctctcttccagtgcaatggagtttgcatgtgccttagtacattgcggtatttatcttccagtgtaagtagtttgtatcataaatgagggagtgttggtgtgatatgaagactggactttgttgacacttgaggctatggtggctatacattaatgacagtatttgattgcagcaatgactataatcagttaggcttaacagttttggaaggcaaatgtagcaagaaaacaacagtggggcatatccagtccatttaactgtatttgtcactacatttttgtttcccctattctttgcaatttcactaatacaaaaaataatttcctaacaagatgtcatttcctggtcaatcattctgtaggttatccaaggagatgtccttaaatgtgatcttccatactttgatatctgtgtggcaaacatcccatatcaaatttcatctcccctcacattcaagcttctgtcacaccgcccaatctttaggtgtgcggtgattatgtttcaacgtgaatttgccatgagacttgtagcacagcctggagatagtctctactgccgtctctctgtgaatgtgcagctcttgtcacgtgtgtcacatctcctgaaggttggacggaacaacttcaggcctccacccaaggttgattcatcggttgttcgtatcgagcccagaaagcccctacctcctgtcagcttcaaagagtgggatggacttgtgaggctttgtttcaaccggaagaacaagacattgggtgccatctttaagcagaagcgtgtccttgaattgttagagaagaactacaagacaatgcagtctctacagctcacctcagatgcagaaaaaggtgaggagaagatgtcaccagatgatgttgcattgctatcaagtatggtcgatgacatgaacatggaaagcagctacgagaatgatgatgatgatgagatggaaatggatgatgccgatatggtagtagagagccgtgcatgtttcaaagaaaagattatggggatattacagcaaggagattttgcagagaagagagcatcgaagctcagccaggttgacttcttgtacctcctgtcgctcttcaacaaagctggtatacatttttcctgaagaaacccgttatggtctagctagaaaagagtattttctttctttcttagtacgtcttgaaaggtgtgaaggcactgcgagaattttgttctaactatatatatttttatttctagtatggaaagtaatttaattcaatgttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0183900, RefSeq:Os10g0183900