Os03g0255500

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0255500| Description = Similar to Phosphoenolpyruvate carboxykinase 4 (EC 4.1.1.49) (Fragment)| Version = NM_001056130.1 GI:115451988 GeneID...")
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Gene Name

Os03g0255500

Description

Similar to Phosphoenolpyruvate carboxykinase 4 (EC 4.1.1.49) (Fragment)

Version

NM_001056130.1 GI:115451988 GeneID:4332293

Length

5230 bp

Definition

Oryza sativa Japonica Group Os03g0255500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8269561..8274790

Sequence Coding Region

8269849..8269992,8270096..8270264,8270349..8270518,8270630..8270808,8270907..8270972
,8271064..8271237,8271486..8271784,8272029..8272129,8272221..8272305
,8272420..8272573,8272674..8272879,8274296..8274540

Expression

GEO Profiles:Os03g0255500

Genome Context

<gbrowseImage1> name=NC_008396:8269561..8274790 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8269561..8274790 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcacgccgaacgggctggcgcggatcgagacgcacggggcgaagacgaagaagcacgagaacgggatatgccacgacgacagctcggcgccggtgcgggcgcagaccatcgacgagctccactcgctgcagcggaagcggtcggcgcccaccacgcccatcaaggacggcgcctcctcgcccttcgccgccgccctctccgaggaggagcgccagcgccagcagctccagtccatcagcgcgtcgttggcgtcgctgacgcgtgagaccgggccgaaggtcgtcaggggagatccggcgaggaagggcgaggccgcggcgaagggcgcgccgtcgccgcacccgcagccggtgcaccaccaccacccgcacgtcaccccgaccatcgccgtcagcgacagctccctcaagttcacccatgtgctctacaacctctcgcctgctgagctgtacgagcaggcgatcaagtacgagaaggggtcgttcatcacgtccaccggcgcgctggcgacgctgtccggcgccaagaccggccggtcgccgagggacaagcgcatcgtcaaggatgaggcctccgcgcaggagctttggtggggcaagggttcgcccaacatcgagatggacgagcacactttcctcaccaacagggagagggccgtcgactacctcaactcccttgacaaggtgtttgtgaacgaccagttcctgaactgggacacggagaaccggatcaaagtccgtatcatctcggccagggcgtaccactcgctcttcatgcacaacatgtgcatccggccgacggaggaggagctggaggagttcggcacgccggacttcaccatatacaacgccgggcagttcccctgcaaccggtacacgcactacatgacgtcgtcgacgagcgtagacatcaacctcgctaggagggagatggtgatcctcggcacgcagtacgccggggagatgaagaaggggctcttcggggtgatgcactacctcatgcccaggaggggcatcctctccctgcactccggctgcaacatgggcaagcagggcgacgtcgccctcttctttggactgtcaggtactggaaagactactctgtcaactgaccacaacaggctgctgatcggcgacgatgagcactgctggagtgacactggcgtgtccaacatcgagggtggttgctatgccaagtgcatagacttgtcacaggagaaagagcctgatatttggaatgccatcaagtttgggaccgtgttggagaatgtcgtctttgatgagcacacccgtgaagttgattacaccgacaaatctgtcaccgagaacacgcgcgctgcttaccctatcgagtacatccccaacgccaagataccgtgcgtcgggccacacccgaagaacgtcattctcctggcatgcgacgctttcggcgtcctccctcctgtcagcaagctaaaccttccacagaccatgtaccacttcatcagtggctacactgctctggttgccggcacggaggatggcatcaaggagccgcaggctacgttctctgcttgcttcggtgcagcgttcatcatgctccacccgaccaagtacgccgccatgctcgccgagaagatgcagaagtatggcgccaccgggtggctcgtcaacaccggttggtccggtggaaggtacggagttggcaagcggatcaggctgccgtataccaggaagatcatcgacgccatccactccggtgagctcctcaccgccaactacaagaagacggaggtgtttggcctggagatccccactgaaatcgacggcatcccgtctgaaatcctcgacccgatcaacacctggacggacaagggcgcgtacaaggagacgctcctgaagctggctggcctgttcaagaagaacttcgaggtgttcgccaactacaagatcgggggagacagcagcctgacagacaagatcctcgctgctggaccaaacttttga</cdnaseq>

Protein Sequence

<aaseq>MASTPNGLARIETHGAKTKKHENGICHDDSSAPVRAQTIDELHS LQRKRSAPTTPIKDGASSPFAAALSEEERQRQQLQSISASLASLTRETGPKVVRGDPA RKGEAAAKGAPSPHPQPVHHHHPHVTPTIAVSDSSLKFTHVLYNLSPAELYEQAIKYE KGSFITSTGALATLSGAKTGRSPRDKRIVKDEASAQELWWGKGSPNIEMDEHTFLTNR ERAVDYLNSLDKVFVNDQFLNWDTENRIKVRIISARAYHSLFMHNMCIRPTEEELEEF GTPDFTIYNAGQFPCNRYTHYMTSSTSVDINLARREMVILGTQYAGEMKKGLFGVMHY LMPRRGILSLHSGCNMGKQGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDTGVS NIEGGCYAKCIDLSQEKEPDIWNAIKFGTVLENVVFDEHTREVDYTDKSVTENTRAAY PIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLPQTMYHFISGYTALVAGTE DGIKEPQATFSACFGAAFIMLHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGKR IRLPYTRKIIDAIHSGELLTANYKKTEVFGLEIPTEIDGIPSEILDPINTWTDKGAYK ETLLKLAGLFKKNFEVFANYKIGGDSSLTDKILAAGPNF</aaseq>

Gene Sequence

<dnaseqindica>4799..4942#4527..4695#4273..4442#3983..4161#3819..3884#3554..3727#3007..3305#2662..2762#2486..2570#2218..2371#1912..2117#251..495#gccccacacctctccactcctgtcctgtcatcttgtacactatcgcgttgctgatctcctcctcgactgcctcgtacgtgttcatcatctcttttaatttctccgtggtttttgcaccggcatttggatgctgcaagcatcaatggcagaaccgggtcgtaaatcgtaactagcgctgttatgttggcgttgctaattaacgtgactgtttacttttttttttgaaggtttcgcgcgaccggagacggccatggcgagcacgccgaacgggctggcgcggatcgagacgcacggggcgaagacgaagaagcacgagaacgggatatgccacgacgacagctcggcgccggtgcgggcgcagaccatcgacgagctccactcgctgcagcggaagcggtcggcgcccaccacgcccatcaaggacggcgcctcctcgcccttcgccgccgccctctccgaggaggagcgccagcgccagcagctccagtccatcaggtgactcctcggctctctctctctctctctctttttttttgagaacgctcgtataataataggctttgccttttgcttcctaacgagcaatctgaattggaaatggccactggccaatgcatttgttaagaaaactaacaagggaatgacaaatgaaaatgggaaattttagccgggagaaatggaaatggaaaatgaagaggaggaatcgaacaatccccttttagataggacgaaagtaaaaaaaaataaaatgacgttgttgctggataattttactcccacatggaagagaacgaaaggatggaccatggtaatggtagttgtgcacctgttctgccacgtggacattggaggacgggcgtgtcaaccatatccagcaacctaaattcgtaacagacacgtagagttcagagcgtaaatgaaacgaataaagataaaccaaaagtaactcacggggccaaaccaagtaatgtgtttctaaaaaaaaaaagaagtaatgttgggactaggattaccgtgggttaatcggctaatacgcacaaaaagttggacaaaaaaaaaagtaggtccggattacaatcccaggtcgttttccagcagaaaggacaatcatcacaagatgtccgcaccgtgccatgcacgcccgctgcccgcaggccgcagcctttcacgtgacatcccccgtgcaccgcaccgcaccgcatcacaaaattgcccagaacatccacccgcttgcacgcaccgcacaagttcgcattccccctcgcatcgcaccgaatccacgcaaacccccaaaaatcccaatacgatttcgcagtcatgctggggagcgagcgaagaaccttggcgtgacagaattcgattgggcggtagagacaacagaggcgttgattttagctgtatttttgggagagcaatacatgcttccgtcatgcacgctgccgtttgtgtcgatcggcaacgtcgacggtatcgcgatagggcttgttgggggatacgatacgacacgcaccagccgccgatgcggtgtctcagacgtaacgaacgcgagcgcaatttggggcggcaacttgcgccgcggggatacccgataatctcctcatcagcctgacgcggcggcgtcggtagctgttgccgtcgcgtaacttgcgcctgaatttcccccaagaaattagaggaaacctcgtatcgttctacacaagccgctcgacacagtattctattcggactaactagacacaatgagttcattgagacatggtcttacttttatttaggagtaagtttagcagtggtagcaagcaactgagcaagtgctgattttctttggatgttcttattattattattttgacctgataaagtggtaattaactgatggaacgatccctgtcacgatgacgtctgatgcagcgcgtcgttggcgtcgctgacgcgtgagaccgggccgaaggtcgtcaggggagatccggcgaggaagggcgaggccgcggcgaagggcgcgccgtcgccgcacccgcagccggtgcaccaccaccacccgcacgtcaccccgaccatcgccgtcagcgacagctccctcaagttcacccatgtgctctacaacctctcgcctgctggtacgcgacgcgacgccagaacggctgtaatttttgttcagggattataactcgtgacatgtgtaagtgacgtgttttctggtgggatgtgggcgagcagagctgtacgagcaggcgatcaagtacgagaaggggtcgttcatcacgtccaccggcgcgctggcgacgctgtccggcgccaagaccggccggtcgccgagggacaagcgcatcgtcaaggatgaggcctccgcgcaggagctttggtggggcaagtgagttcaccgcctactctacttgtgcatgtcaaagctctgtttctgcaggctctgcttgctgatttgcagctgactgatcactctgttttgcctgtgtctctcctactgcaggggttcgcccaacatcgagatggacgagcacactttcctcaccaacagggagagggccgtcgactacctcaactcccttgacaaggtgatatacgactctcaagttcagtgaccgtgtcagtaatttttacatcagcagttgataacaaactatattttgttctgtatttctgtaggtgtttgtgaacgaccagttcctgaactgggacacggagaaccggatcaaagtccgtatcatctcggccagggcgtaccactcgctcttcatgcacaacatgtaagtgaagccgtcactttgcactatctttaggtcgctcgttcgtgtcgccaccagataagttcaccttgacgtatactgctccatgattatgagatatatgtgactatatgttgtgtgtgtgtgctggaatcctattgcatgcctaccaagacatgggggatcatctcacatcagcggcgtactaagtagtagaattgcagtagtaaccggaatggatatgtgggggaaatgggcttggcaggtgcatccggccgacggaggaggagctggaggagttcggcacgccggacttcaccatatacaacgccgggcagttcccctgcaaccggtacacgcactacatgacgtcgtcgacgagcgtagacatcaacctcgctaggagggagatggtgatcctcggcacgcagtacgccggggagatgaagaaggggctcttcggggtgatgcactacctcatgcccaggaggggcatcctctccctgcactccggctgcaacatgggcaagcagggcgacgtcgccctcttctttggactgtcaggtaataagatggctctccacggtggatgaaatgaaaaaacacccgtggtgccgtcacctgctcagtctcatctgacgcgttccccttgatcaccatatatataataactgaatacatcatatctgtttgagatctttgttgctgtgtgcatgatgcctgtttcactgaagaatttgtgttgttagtgcccttgttgtttactgtcatctttttggctgattttgtgtatgtgttattttaatcggcaggtactggaaagactactctgtcaactgaccacaacaggctgctgatcggcgacgatgagcactgctggagtgacactggcgtgtccaacatcgagggtggttgctatgccaagtgcatagacttgtcacaggagaaagagcctgatatttggaatgccatcaagtttgggaccggtagttgcctgaaccttcagtttaatttagtcgatcattctagtttctcccgcttgccatttcattgatcgaaaatgtttggcgtctgcagtgttggagaatgtcgtctttgatgagcacacccgtgaagttgattacaccgacaaatctgtcaccggtaagttatctccaaagcgcaatccggtttcagtcagtcacaaaagttacagcaaaaaacaaaaaatggaaatctcacaactctgaacttttctgcagagaacacgcgcgctgcttaccctatcgagtacatccccaacgccaagataccgtgcgtcgggccacacccgaagaacgtcattctcctggcatgcgacgctttcggcgtcctccctcctgtcagcaagctaaaccttccacagaccatgtaccacttcatcagtggctacactgctctggtaaacaatttttgttcagaagcagagtcacctgccttaccttcctatcaccttgatgatcaacaaaggaatttagcctgaatcttcgttattgcattgccatttcaacaggttgccggcacggaggatggcatcaaggagccgcaggctacgttctctgcttgcttcggtgcagcgttcatcatgctccacccgaccaagtacgccgccatgctcgccgagaagatgcagaagtatggcgccaccgggtggctcgtcaacaccggttggtccggtggaaggtatctgctactgtccactgtaacagcgtccacaccattgcacatttacctgtggcatgaactaactctgaattcactgttcaggtacggagttggcaagcggatcaggctgccgtataccaggaagatcatcgacgccatccactccggtgagctcctcaccgccaactacaagaagacggaggtgtttggcctggagatccccactgaaatcgacggcatcccgtctgaaatcctcgacccgatcaacaccgtaagctccgtagcatcacgcatcagttcatgccatttctgctatacatgtaaaaaatgcagagtctgagttgttcttcgtcggaaatgtggcctctgtgcagtggacggacaagggcgcgtacaaggagacgctcctgaagctggctggcctgttcaagaagaacttcgaggtgttcgccaactacaagatcgggggagacagcagcctgacagacaagatcctcgctgctggaccaaacttttgagttactgaagaataaaaaatatgcagataaagaacgcgatgaagctagtcagttggttacaataaagaagtgggtctatgcgtgtttgccaatgatgatgacgaaaatgttggatcgatgtgcagctaccggtagagtttagctagcttcctataagtttcatgcgtgtctgttaggttctgtcagtttgtctagcttgacggtgtgtatgcagtatgctccattcccccttcccctgtacacatctctattttctgaattggaatttgaaagcatcttgatttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0255500, RefSeq:Os03g0255500