Os10g0184200

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Revision as of 08:32, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0184200| Description = Protein of unknown function DUF594 family protein| Version = NM_001070793.2 GI:297610182 GeneID:4348217| Length = 31...")
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Gene Name

Os10g0184200

Description

Protein of unknown function DUF594 family protein

Version

NM_001070793.2 GI:297610182 GeneID:4348217

Length

3112 bp

Definition

Oryza sativa Japonica Group Os10g0184200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5440282..5443393

Sequence Coding Region

5440443..5440450,5441230..5443237

Expression

GEO Profiles:Os10g0184200

Genome Context

<gbrowseImage1> name=NC_008403:5440282..5443393 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5440282..5443393 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gattccagtttagtggcgaatgcccagcagttctggaatgagtgggagatccagtgccttgtgcttgcgagctttagcttgcaagtgttccttcacttcttctctagcattcgcaagggtaacacctcccggttattaagctcgctgctttggctggcatacttgttagccgactacgttgcaacattcacgctgggtcgcctgacgctccacgttgatgatccacgccatcagcttgtgctcttctggacaccgctcctgctgctgcatcttggtagccaagagacaatttcggccttctccattgaggatgcaatgctgtggaagcgtcacctccttggcctcgtctcccaggtggccctggcaatttatatcgtagcaaagtcatggcgtccggacaagcaacttttggggcccttggtgcttatgttcatttctggaacaatcaagtatgcggagagaacatgggcacttatgactgccagcagctcaatgtcgccagggagcgattccatggcagatcatgtgctgggggtacaagacgatgttatcttagacgctaaatcctattttgatgagttgcatagtattttccctgggaagaatgtgctggacattgaaggtcacaatggaggaagaagaacagatgacgatggctatgagggtctggtgatggctgctggcaagggcttccggttatgccttgattttctgacagacatgacccctttcctggtatggtctaacacagacactataattgatagtgccattaagaagctccgtacttcaaatcctgaaacacaagtgcagatggcttataaactggtggagatccagctctcacttatctatgattacttatacaccaagtatggggcacttcagttccgccttggccttgtcagcagcggaatcgagcggctcattacatttttctcaactttggcagccctaggcttgtttgtgggtgccaatctcaaggggccattcaactacagcagagaagatgtcatggtgtcctacgttctgctagccggtgcaatcacactggacatatcctccatcttcatgcttatctcgtcatattggctgcagttacaccggagaggtggcttgtttggctgttctttcagtcttgccaagtgtgttcatgcagggagcaaaccactgtggtcagagaagatagcgcagtataacttgattgatgcatgcatccaagaagaacgtggtggcataatatgcggttgggtgatgaggaggacaggcattgtgtctgacatcaatatgagtaatacagtctctcctgaactgaagaaattggtactggacaaactgttcgaggtagcaagcacccggagtgtaagtgattactgggactgggatttcagcaagtaccgtggcatgtggttgcagtggtggctgcaggaggggagaatccaagctgacatagctcaaggaatactaactgatggcataaccgacactgacttgtattttccaatgacagtcattgtttggcacatcgcgacggagatgtgctggttcgccgacgaggatgactattccccatgcagggccccgagcatggagctgtcaaggtatgtcatgtacctcgttgcaaaacgggatgtgatgagtggcagcaatggacactttgagcttggcaaggcacgccgccaggtgaagcgcatccttgaaggacggggtatcagtgatgagagggggctcctgaagtatgcacgacaggcaaccggccaggtgaccgaaccatgcttcggtcgtggccgggcaatctctgagcaccttctcaaaataagcaacagagctctgcgctgggagctaatctccatgctgtggatcgagatgttgtgctatcttggacccaattgcggggctcagttccatgccaagcatttgagcactggtggtgagtttgtcacgcatgtcaggatcctactggttgttcttggcattccttttctcaggtctgacatgaaaccagggaaattctga</cdnaseq>

Protein Sequence

<aaseq>DSSLVANAQQFWNEWEIQCLVLASFSLQVFLHFFSSIRKGNTSR LLSSLLWLAYLLADYVATFTLGRLTLHVDDPRHQLVLFWTPLLLLHLGSQETISAFSI EDAMLWKRHLLGLVSQVALAIYIVAKSWRPDKQLLGPLVLMFISGTIKYAERTWALMT ASSSMSPGSDSMADHVLGVQDDVILDAKSYFDELHSIFPGKNVLDIEGHNGGRRTDDD GYEGLVMAAGKGFRLCLDFLTDMTPFLVWSNTDTIIDSAIKKLRTSNPETQVQMAYKL VEIQLSLIYDYLYTKYGALQFRLGLVSSGIERLITFFSTLAALGLFVGANLKGPFNYS REDVMVSYVLLAGAITLDISSIFMLISSYWLQLHRRGGLFGCSFSLAKCVHAGSKPLW SEKIAQYNLIDACIQEERGGIICGWVMRRTGIVSDINMSNTVSPELKKLVLDKLFEVA STRSVSDYWDWDFSKYRGMWLQWWLQEGRIQADIAQGILTDGITDTDLYFPMTVIVWH IATEMCWFADEDDYSPCRAPSMELSRYVMYLVAKRDVMSGSNGHFELGKARRQVKRIL EGRGISDERGLLKYARQATGQVTEPCFGRGRAISEHLLKISNRALRWELISMLWIEML CYLGPNCGAQFHAKHLSTGGEFVTHVRILLVVLGIPFLRSDMKPGKF</aaseq>

Gene Sequence

<dnaseqindica>162..169#949..2956#aaggagttctaaaaaaaaaaaaatcccctcgatggttcgcccgagcttccctgcactgcacggcggcagcggcagcccactcctcccggcgtatggccgcggcggcgctcgcgactcgccaacccctctcgcggctgcggctcttcccgatccggctgtaggattccaggtaccttccccctttgctgctcaatgaagtcgcaggactgctgcagaaatttcttccgattccaaaatgcgtttgtaaattttgttcgaaacttctgtagaattttgaaatttcgggtgaccgccgaaattttttacgataccgatagtgttaataagtgttaacccgttacccctgctatcaatagacttgtatggactcttgtgtagaaggcattgtatcgcataaatatcacacacgaatatgtgggtgttaaaagcttatgttttggtgtgtttgttgaaacagtttgtgtgaggaaactcagtaatctctaagagggaagattttatggttcaatcttagcagggattttttttttttggggggtggggggaggggggaatctcaacaggaacatctaaaaactgatatgaagttcaaactgtaaaaatgcattcaaatttttcataaaacgtttttggaattattctccaggtagttgcatggcttgataactactccctccatcccaaaatgtttgacaccgttgactttttaaaaaatatttgaccattcatcttattcaaaaaatttaagtaattattaatttttttcctatcatttgatttattgttaaatatttttatttatacatatagttttacacatttcacaaatttttttgaataagacaaacgatcaaacatgtttaaaaaagtcaacggcatcaaacatttaggaaatgagggagtagtttgattgacaactaacatgggatttttggtcctttgatccagtttagtggcgaatgcccagcagttctggaatgagtgggagatccagtgccttgtgcttgcgagctttagcttgcaagtgttccttcacttcttctctagcattcgcaagggtaacacctcccggttattaagctcgctgctttggctggcatacttgttagccgactacgttgcaacattcacgctgggtcgcctgacgctccacgttgatgatccacgccatcagcttgtgctcttctggacaccgctcctgctgctgcatcttggtagccaagagacaatttcggccttctccattgaggatgcaatgctgtggaagcgtcacctccttggcctcgtctcccaggtggccctggcaatttatatcgtagcaaagtcatggcgtccggacaagcaacttttggggcccttggtgcttatgttcatttctggaacaatcaagtatgcggagagaacatgggcacttatgactgccagcagctcaatgtcgccagggagcgattccatggcagatcatgtgctgggggtacaagacgatgttatcttagacgctaaatcctattttgatgagttgcatagtattttccctgggaagaatgtgctggacattgaaggtcacaatggaggaagaagaacagatgacgatggctatgagggtctggtgatggctgctggcaagggcttccggttatgccttgattttctgacagacatgacccctttcctggtatggtctaacacagacactataattgatagtgccattaagaagctccgtacttcaaatcctgaaacacaagtgcagatggcttataaactggtggagatccagctctcacttatctatgattacttatacaccaagtatggggcacttcagttccgccttggccttgtcagcagcggaatcgagcggctcattacatttttctcaactttggcagccctaggcttgtttgtgggtgccaatctcaaggggccattcaactacagcagagaagatgtcatggtgtcctacgttctgctagccggtgcaatcacactggacatatcctccatcttcatgcttatctcgtcatattggctgcagttacaccggagaggtggcttgtttggctgttctttcagtcttgccaagtgtgttcatgcagggagcaaaccactgtggtcagagaagatagcgcagtataacttgattgatgcatgcatccaagaagaacgtggtggcataatatgcggttgggtgatgaggaggacaggcattgtgtctgacatcaatatgagtaatacagtctctcctgaactgaagaaattggtactggacaaactgttcgaggtagcaagcacccggagtgtaagtgattactgggactgggatttcagcaagtaccgtggcatgtggttgcagtggtggctgcaggaggggagaatccaagctgacatagctcaaggaatactaactgatggcataaccgacactgacttgtattttccaatgacagtcattgtttggcacatcgcgacggagatgtgctggttcgccgacgaggatgactattccccatgcagggccccgagcatggagctgtcaaggtatgtcatgtacctcgttgcaaaacgggatgtgatgagtggcagcaatggacactttgagcttggcaaggcacgccgccaggtgaagcgcatccttgaaggacggggtatcagtgatgagagggggctcctgaagtatgcacgacaggcaaccggccaggtgaccgaaccatgcttcggtcgtggccgggcaatctctgagcaccttctcaaaataagcaacagagctctgcgctgggagctaatctccatgctgtggatcgagatgttgtgctatcttggacccaattgcggggctcagttccatgccaagcatttgagcactggtggtgagtttgtcacgcatgtcaggatcctactggttgttcttggcattccttttctcaggtctgacatgaaaccagggaaattctgagaaagaaactaatgattgcgcctgcagctttgtttcgagaaaacccctttgtatgtgtgtcactatgtatttatgttagcttgggctgtttgttccagtcgtatgtatctttgcataaacctaagtttcagaaaatgcctgattttctattatcta</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0184200, RefSeq:Os10g0184200