Os03g0257000

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0257000| Description = Conserved hypothetical protein| Version = NM_001056136.1 GI:115452000 GeneID:4332299| Length = 4177 bp| Definition ...")
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Gene Name

Os03g0257000

Description

Conserved hypothetical protein

Version

NM_001056136.1 GI:115452000 GeneID:4332299

Length

4177 bp

Definition

Oryza sativa Japonica Group Os03g0257000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8357959..8362135

Sequence Coding Region

8358326..8358396,8358687..8358838,8359589..8359668,8359806..8359879,8361939..8362086

Expression

GEO Profiles:Os03g0257000

Genome Context

<gbrowseImage1> name=NC_008396:8357959..8362135 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8357959..8362135 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacactggggtgaaagtcgaggaggcggatgcgggtgagacgatggaaggcgtcgcgtccatcgcgctactgccgtccggcgccatctccggccacttcatccgcctcccggactccgtctgctacggtctccacggcacaccgatatcttgtgagagggagtgcagtcgaggagaagattaccgcctgataaagctttccataattgattttaagaacaagcgagagaaggtggctgtggtggaatgcaggggccatgatgctgctcggttgcaaaacattgaccatttgcatggttgggaagatgacattgttggtttggttgaaaagaaacatgggaatcggaaattctcgatctctttcgaatgtgagacactgaaggctgataaagctgcagatgagcacattagcaagtatatgccaaatctaagtggaatggatgccatcgtaaatatagggaaaatgagtatctctggcatcaatctggacgaggacgacgaaccaagtggagacaactaa</cdnaseq>

Protein Sequence

<aaseq>MEDTGVKVEEADAGETMEGVASIALLPSGAISGHFIRLPDSVCY GLHGTPISCERECSRGEDYRLIKLSIIDFKNKREKVAVVECRGHDAARLQNIDHLHGW EDDIVGLVEKKHGNRKFSISFECETLKADKAADEHISKYMPNLSGMDAIVNIGKMSIS GINLDEDDEPSGDN</aaseq>

Gene Sequence

<dnaseqindica>3740..3810#3298..3449#2468..2547#2257..2330#50..197#agtctcggacccccaggcgaacggcgaccaccggccgccggcggcggagatggaggacactggggtgaaagtcgaggaggcggatgcgggtgagacgatggaaggcgtcgcgtccatcgcgctactgccgtccggcgccatctccggccacttcatccgcctcccggactccgtctgctacggtctccacggcacacgtatccatctctcttcgttgcctattcctgcacttgctggtgcctgatcatggggggctggctcttactgcatatttatagcctgaatcgtctgcggtctcacccaaaaacccttttgctctcaccaaaaccctctcttgctcatcgcctaatgagaagcaagtgatatacttttttttttctgttggcgaaatctgtgttggaatcattgcaaatgtccacattctgtcccagaaggaaaattgattgaaaagattaagggggtgtttgggagagaggggctaaactttagccgggacttatgttgcccctctctcccaagcaccccctaagtgtgtacaaaatgacatgacccttttgcacaagaaattcgagtctttttatgctattagaaaaatgtagtattgatcaggcggttggcctttcttacttacacattggtaatctccgaggatacatgattgcgtagtgaaagaagattactctggggggtgtagctactaaagcaagtagctgaggaagttgtggggttaaagacattgtgagaatagcacactagaacttttcgttgtggcaagttgttttttcttgtatttcctcttttttttttcctctctaatcaccgcgggtgattatgtacagttcttcctctgcttaatataaaatcagctaaggctgacttaggtttcaaaaaaaaaaaaagtagccgaggaagtgtataatgcaagacatgggtggtgttctagctccagatgtttgcaatgaagacgacacggcaggagcagagcacaacagctggaggagatgatgcctataagaagaagatagaagatgctactgatggttctttttatcatgtttagctgctgcttcctgttttacaaactactgaggctggaaaactgcttatggataactgattattctggtggtctgggaactttccttttggtcttgtagcaggttggtaagtttagtttggtggtccttttgctcttttccactttgtcagctgaaatagtgggatggcactattgcagcagctgataaagggtagaaaaaagcttttatctttatttttgagtaaagtgtacgggcggtccttaaacttgtagtggtgtgtcatctaggtccctaaactctcaaaatgcatatccaagtcctagaacttgtcatagtgtgtcatctaggtcccaaatcaccacaaccccttcaggatcctacgtggcgttgatgtggcatgccacacggaatgacgtggcatcattttgactgacaaatgggtcccgttaaaaatttttcctttttctttttttcttctctttttttccctttcttctcctttctctatgacccgagcagaagaaaggaaaaaaaaagaagaataagaagaaaacgaagaaaaataaaaagaaaagaagaaaaaaaaagaaaatggcacgtcatccatgtggcatgccacatcagcgccacgtaggatcctagaggggatgtgtcgatttgggacctagatgatacacttttacaagttctgggacctggatatgcattttgagagtttagggacctatatgagacaaccatacaagtttaaggaccgccaatgcactttactcttcattttttgccggatgaaactgtggattccgttaaacttaaatttctggtaatggaatcgggggaggggtctcctcccttgctcaaaagaaaagaaggcatagtgagataagacgtgctaaatcgtattagacaatgccctttactagcgtgtcattcaaaagaaaatgtgtataaaattgtacgacctgttattatctaggaaattggggtttgttttgtgctttatgaaaaaaaatcatgattaactgctggtgccttatcgacatgtaatggaagcttgagtgatacacagtaagataatatgttctgaggtagataatatgttctatctagtataagagaatcaaagtgggtggaattgtgcaccatctgtatctgctagatagaaaaaaaaatttaacttacattattctttcccttttcttgtctgtcatgtaagcgatatcttgtgagagggagtgcagtcgaggagaagattaccgcctgataaagctttccataattgattttaaggtgagaaattctaacttgtccaccatcaagcacctactatttttgtgctatatatttccttggagttggatctataagaagtatctttgctcataagagttaaatatcctcatgaaactgcgatgctcatttgacagaacaagcgagagaaggtggctgtggtggaatgcaggggccatgatgctgctcggttgcaaaacattgaccatttgcatgggtaactactttttgtcatggatggatttcattagaactaatgcagaatttactatctatcaacaatttctcaaataagaggattgtactgagatactgtgaatactcattttctgaggctctgtaggcacataattggattacaatgaacaccaaagcaacatactatagtagcatacttcgaataaaaccgagaaaaggataaatggctcattgtaccaattattagtgctatcttgtgtgtctttgttctctgtttttcattaaaatttctgttggatgcaacacactgtttcgctgtggcattggttctttgtggtactttttcaagcaaccaaaatgctgttaattaatgcataattgctttgggtcttactggcatgaagttggagttgtagattaatgctgtaacacctttcatattcccaaaatgctatgatgtgtgttgattgtcttatctttaatcagatatctttttgagaatgcacataaggattgcacatcttttgtaattagatgtcttgcataagttctaatgagtaaaggaagtgtgaaaaaagtaaagaggggattaagcagagtgagatctagggtctctcttggttgactccggtgaatgatggtaatggttaattatagtctgaggaaactgtggactcggtgcttttttactatcatttatttgttttatgctgagcgtgaatttttaatccaacctcaattttcctgaaggaataaatattttgtgcagttgggaagatgacattgttggtttggttgaaaagaaacatgggaatcggaaattctcgatctctttcgaatgtgagacactgaaggctgataaagctgcagatgagcacattagcaagtatatgccaaatctaagtggaatggatgccatcggtaagcacatacctatgtcttttgttgtttggggagtgcgcaagagagattcttggccttccaccatagtattttagttcctgcagaagtgttggggacttggggtttagtgtcaggttgtagagaggacatgtatatcggcaccacactagtaaaggatggatggtttaattattccgcaccaattttatcattgatccagcttacatttgagtgcaagtttccactgtgttcagtgtgcaacctgttgaaaaatttctactactaattcattctattttacactgcagtaaatatagggaaaatgagtatctctggcatcaatctggacgaggacgacgaaccaagtggagacaactaaaagcagaggcacatttgtcatggtgtggtagcagtggctggctggcccttgttctcctccctccttagcttttgaaacctcgcttttgaaacctcgaagaaggcgtgactgtgtggttaccatcaaacgccaaaattgcatccaaaaattacgtataccttggacagtcgtctgacattctcagtaatctgctaatgttaagtcaatgtggtttgtggaatcgtgggcaagatgtttcaagaattcaagtactcctaatcaagtgtttagcgtaatgtttgttgctgcatccgacaaaaaccctggagggattgtacacttcggtttggttctggtaagaagtgcagtccttgtctctgccgctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0257000, RefSeq:Os03g0257000