Os03g0260100

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0260100| Description = Conserved hypothetical protein| Version = NM_001186427.1 GI:297721984 GeneID:9268957| Length = 4546 bp| Definition ...")
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Gene Name

Os03g0260100

Description

Conserved hypothetical protein

Version

NM_001186427.1 GI:297721984 GeneID:9268957

Length

4546 bp

Definition

Oryza sativa Japonica Group Os03g0260100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8488024..8492569

Sequence Coding Region

8489913..8489921,8490869..8491110,8492239..8492509

Expression

GEO Profiles:Os03g0260100

Genome Context

<gbrowseImage1> name=NC_008396:8488024..8492569 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8488024..8492569 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgcacctccgctccccgctggtgcttctgctgctgctcgccctccaccggctgtgtgccccgtggctggtggtcgccgacgacggcgcctcggtggcgaggtcggccttctccatggacggcgacgtggcgtgggtggtgcaggtaagcgacctccacatcagcgcctaccaccccgaccgcgccgacgacctcgcgagcatcctcggccccgccctgcgcgccatccgcccccacctgctcctcgtcaccggcgacatcacagatgcaaagaataggagaaaaactacgtcaagacaagatgagagggaatggattacatacaaaaaagctattgatgcaattgttggaataggtggtattgataagagcaggatatttgatattagaggtaatcatgatacatatggagttccctataggggaggaaaattggatttcttctcaacttacagtgtgaactcacagcttgaccgattaagcaccatcagtagcattttgcttcaggtactgtag</cdnaseq>

Protein Sequence

<aaseq>MASHLRSPLVLLLLLALHRLCAPWLVVADDGASVARSAFSMDGD VAWVVQVSDLHISAYHPDRADDLASILGPALRAIRPHLLLVTGDITDAKNRRKTTSRQ DEREWITYKKAIDAIVGIGGIDKSRIFDIRGNHDTYGVPYRGGKLDFFSTYSVNSQLD RLSTISSILLQVL</aaseq>

Gene Sequence

<dnaseqindica>2649..2657#1460..1701#61..331#gacgcggcggcgtagagattccccgccgcgccggatcccgaacccgttcaccgcccagcgatggcctcgcacctccgctccccgctggtgcttctgctgctgctcgccctccaccggctgtgtgccccgtggctggtggtcgccgacgacggcgcctcggtggcgaggtcggccttctccatggacggcgacgtggcgtgggtggtgcaggtaagcgacctccacatcagcgcctaccaccccgaccgcgccgacgacctcgcgagcatcctcggccccgccctgcgcgccatccgcccccacctgctcctcgtcaccggcgacatcacaggtgagcggcgagcccccttctcatgtatcgtcaaatttgattaaaaaaaagtcacgaattgttccttcatgcatccattttgtacagttgtttggtaaggagcatggcaactgccgagaaatagaccgtatctactctggttttgacatattgcaagtgatcggtgttgagtggtattgttatatgtgggaaatagcagtatataaactcgattagctatgctgtgaacgtagaatcaacttccgtataagctgtgaactcgattagctatgtgggaaattatgctcacagcatgagctttttgttacagttgtgctgttaaatgcgcatgtacttctgaactaatcccatctagtacatgatggcactgactacgaaggaatatcatgttctgttaatgagaatctgcagaaaattctgattcatttccatgtagcgtaggcaggttgaatttgtatttgtggttgccaagtattgcctaaaaagatcaaatgatacagtaactcagagtccatggctccatgccatgaaacttgagaatagcttcattagttaatgcaaggtaaagcatacaacttacaaactaccataaggttagtagatcatttttctaataaactcagctagcgtaacatccataaacatattctggaaatatcctggagttattggcctaacattcatttcaactatttgcatgaagaatatgactctgaatttgttgtataaaccattaaattctccaatatcgtatctaatggcgacatacatgaaagctgctttgttacaacaaatggagataaatcccaaatcacttgaaaacattactaactgtattttttatatttggaaaatatttatttgtatgtggaaggtcaaatattggaaagttgatttggtagtaaatttggataacttcaattttcgtcccttgctataatgcatttccttttttcaccttgagtgtacatgttaatttgttagacagaaagcccttgctagaataataaggaaatgaaacaagcacatatatggttgatgcaattgaatgtatatgttgttcttgtagttttatatattcctatgactgtataataatttccagttttttcgtgggatgttaacaagatgcaaagaataggagaaaaactacgtcaagacaagatgagagggaatggattacatacaaaaaagctattgatgcaattgttggaataggtggtattgataagagcaggatatttgatattagaggtaatcatgatacatatggagttccctataggggaggaaaattggatttcttctcaacttacagtgtgaactcacagcttgaccgattaagcaccatcagtagcattttgcttcaggtactccttatcttcttgtctgatctccttgttaggcacaattaattttgttcatagtcgtttatcatgacttattattcgtcatgcgcataatccagtgtacagttatctttcaattaatccagttctatattctgcttctttgaagatgtaaagcatactataacatatttgctgtcagagcttcagttgaacattgacctgcactttataccgctgattactgtgcacagaattaatgctcctctgccttgattattgaacgtcctctttggttagctggtagaacaatatctattggtccataataaatattactctcgtgtgatactgggcatgtagtactacaaatacatcatgcttcaatatcatactgatgatacttgaagcagaaatgtacgataagcttgaacatagcactaaaccatcttactcaatggagaacagctcttgctaactagacttgaccatcaattataatttactaataattgcatttatatgtaacaataatgatgtagtgtgctatactgatgtcaatgcaccttcagactcgcttaatgtacactcaatagcaggacagatgaaggtggctatacattcagcacttaaaccataactggcctgtgtcaacctacaatggtagttaaatttactaaactataactctatttatctttggcagctattacgaatcaaattatgtcttatctgtgccttataatttccgtaacccactttgtctctagcacttatatagatttctaatggtgtcataacagtactagaggagatttttttttttatgttgggctatctgtgcataacacattgtctatgttggattatctgtgcataatacattgtcaaaattcttgtaccatttatatgccacgcatctctgctaattctgcttacaatgctgggcctgaattttatcctaaaaggtactgtagggacgcaggaattatctcttccttggcatagatgatacaatgagtattggcattcgatatccagctaatttatttggccatcctactgataagaggatagacgctgttaattcagaacttcaatactggtccaatcattccaatgttccaataacaaaagtagtttttggacattaccctatgtcattcactacttcatctcaaaaaggacaacgttatgaaagtatatttgcaaagcagtcaatttcagcatacctatgtggccatctgcacgcgaaaattagtaagcagctttggcggtttcatgaaatgagtgcaacaacacaagagcagaaatcaagctattgggaatgggaacttggagactggaaagagtcaagactgatgaggattttagcaattgatggaggtgcaatctctttcatagaccacacactaaaacaggcatttcaaacttccatcttgatcacatacccaacagattcaagaagtatgaatacattggaatcaatgaattggtcaacgagaaatgatataaatgttcttgttttctctaatcaggtgatccgcaatgtgagtgcaagagtttttgactctcataatgagtttaagatagttgaagaaataccactgcagcttgttgccacaccatctgttcacaaacctttgttccatgcggaatggaatgctgaaaactacaaaagtccatcccctactcgctactggctgcaagtttttgctcaggattctcagggtgggaagacatcaagcgagcgacgaccattttcagttgagggtaaagtgcaaattcaatcacgtccatgtctgaactacttgatttttgaagtccaatgggaagacatgtatcaagttcttctgtggagtaattttgccttcataattgtactattgtttgctcccaaattgctgtatcattttatgaagaaaagtttgacataccaaagatggaccgtgtcagttatgctatcccctatccagccgaggaaagcttacttttggttggtctggtttctaatggagggtgcaaggagtagacccatctggttttctttgctcatatatgttatttggcttattgaaatgccatggttttggggtcatgcgacatctgagaaaggagaaattgctcaaatgtacttatccggatggagcatcccatctcttggtgaagacttgacctggaacaaatcgagcaacccagatgtgctggttattacactgcctttcctatacctggtggttgtcccagttgtagttgtaatatatagtttgtttgcagagaaggctgttgcttgtttgcggcacagcagaagaacagaaaacacggtcaacccaacaaattcaaaccctgagtcaggatatctactgccaagtgcttcagtgtctttagcgaacctctcagacaagaaaattctctcaatggtaatgaaattctgtggcggctggacaaggagggtgctcctattgttgtgctgtatcattgcggtgatacatttgaaggtgcgtacctatctaaaacaccatctgcagactgtaccatcaatttcatgtcttaaatgttgaattgcatatcttgcagctttcctcaaggctaatgtcagcttatggagccaaaccagtagccttttctcctccagtaacgtggatgccgttgttattattaagtgctactgcctattgtacaatgcccaacacatattagtgctgtcagctatttttgaagcacgagtatattagataagggcgtgaaaggtactgtccttttgttgtacttgaacgtggtgtgaatcgtttatcaccaacaaaaagctttgtacaattactcgatgtttcagttaataaagtgtcaatttcatttcatggacggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0260100, RefSeq:Os03g0260100