Os03g0263800

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Revision as of 12:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0263800| Description = Zinc finger, RING-type domain containing protein| Version = NM_001056172.1 GI:115452072 GeneID:4332337| Length = 286...")
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Gene Name

Os03g0263800

Description

Zinc finger, RING-type domain containing protein

Version

NM_001056172.1 GI:115452072 GeneID:4332337

Length

2867 bp

Definition

Oryza sativa Japonica Group Os03g0263800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8724261..8727127

Sequence Coding Region

8724359..8724459,8724549..8724646,8724761..8725059,8726485..8727015

Expression

GEO Profiles:Os03g0263800

Genome Context

<gbrowseImage1> name=NC_008396:8724261..8727127 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8724261..8727127 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttcttctcccatcaccacctccagcagccgcatcctcaggctccgccgccgccgccgccgcagcagcagcagcaaccggtgcccccttccttcaggaacgcgctgccggtgccggtagatgggcagatcccggcgcctcttcccttcttcaacccgccgccggccttccaggaccagcccgcgcagccaccactggtggacgcgatggggcttacggccgcggcggggctagggtggaggcagcctagggagcaggagctgctaggagagaactcccagatgtcgtccatcgatttcctgcagacgggctccgcggtgtccactgggctggcgctctctctggaggacagacgccatggcggtggcagcggcgctggggctgggaactcctccggcgattcgccgttgctcctgctcccgatgttggatgatgacatctctcgcgaggttcagcggctcgatgcagatatggaccgcttcatcaaggcccagagtgagcggcttaggcagtccatattggagaaagttcaggcaaagcaatttgaggcgctggcctctgttgaggataagatacttagaaaaatacgggataaagaggcagaagtggagaacattaacaaaaggaactctgaacttgaggaccagattaaacagttggcagtggaagttggtgcgtggcagcaaagggccaagtacaatgagagcatgataaacgcactgaagtacaacttggaacaggtatgtgcccatcaaagcaaggatttcaaagaaggttgtggtgatagcgaggtggatgacacggcatcctgttgcaatggtggtgccgccaatttgcaactaatgccgaaggagaacagacactccaaagatttgaccgcatgtagagtctgcaagtcaagcgaggcttgcatgctattgttgccttgtcggcatctttgcctttgcaaggagtgcgaaagcaagctgagcttctgcccgctatgccagtcttcgaaaatacttggcatggagatatatatgtag</cdnaseq>

Protein Sequence

<aaseq>MAFFSHHHLQQPHPQAPPPPPPQQQQQPVPPSFRNALPVPVDGQ IPAPLPFFNPPPAFQDQPAQPPLVDAMGLTAAAGLGWRQPREQELLGENSQMSSIDFL QTGSAVSTGLALSLEDRRHGGGSGAGAGNSSGDSPLLLLPMLDDDISREVQRLDADMD RFIKAQSERLRQSILEKVQAKQFEALASVEDKILRKIRDKEAEVENINKRNSELEDQI KQLAVEVGAWQQRAKYNESMINALKYNLEQVCAHQSKDFKEGCGDSEVDDTASCCNGG AANLQLMPKENRHSKDLTACRVCKSSEACMLLLPCRHLCLCKECESKLSFCPLCQSSK ILGMEIYM</aaseq>

Gene Sequence

<dnaseqindica>99..199#289..386#501..799#2225..2755#aactgtagaccccgtctcgccttctctctcctctcttccctctaccttccctttcccctctctccctccttcccccgacttcctccccgtcctcggccatggcgttcttctcccatcaccacctccagcagccgcatcctcaggctccgccgccgccgccgccgcagcagcagcagcaaccggtgcccccttccttcaggtacgcgatctcaattccattctctgcgcgttcgtgcgtacgaattttcgcgctaaaaattccccgccggattccgcgcttcatggcaggaacgcgctgccggtgccggtagatgggcagatcccggcgcctcttcccttcttcaacccgccgccggccttccaggaccagcccgcgcagccaccacgtgagtttccattttctccccacccaccgcgaagaaccctcgtcctcttcgcctggttgaaattccgcttcgattggcgctgatagcatagggcttttgccccgtactgtgtagtggtggacgcgatggggcttacggccgcggcggggctagggtggaggcagcctagggagcaggagctgctaggagagaactcccagatgtcgtccatcgatttcctgcagacgggctccgcggtgtccactgggctggcgctctctctggaggacagacgccatggcggtggcagcggcgctggggctgggaactcctccggcgattcgccgttgctcctgctcccgatgttggatgatgacatctctcgcgaggttcagcggctcgatgcagatatggaccgcttcatcaaggcccaggtcaggcactcgtaaacctttttcgttgtgggattagctaatacgaaaaatgaactaatgatgttattactttaccagcatgtgttacttgtatgaggtattcatgatcattttgttagggaaaactagtgaagcgtcactgtttcaggccatatagtttttgcaggtgaagggcacacacagatagtttcttttctttgctaatgttagaggtttccgcctttgctaattgctattgacaccatgctgatcgttatgagcgtatctctacatgagcagaccatcttttttcaaggaattccttcagtactccacctgaagaaaaccatgtaaattttaacaaaaaggtgaacattaggctatgtttggtttacaacccagataccactctagatgggcctatgcaggcctagcaactctattggactaaaaccctttctttaaccaaaatgatcatcctgaagttactgtctttgaaccctcaagtgttacatattatacttggtggtacagctaacccatcagtatacacatgggactgctatgtgactcctgaatcctgataagccacggtgttagacaaaatggaacgaaaagatagaatttctggtatcctttgtcttagttaatgtgatctgcctgctacattattgtaggcactgttgcttaaagacaaaactgcaatgcattttcagttgatgaaataattaaccagaaggttctatccgtgtaccacctgtgttcttagttccttttgtcttctgttgattggataaatttcagttgtctattcttgatttgcttccatcaattgaacttttaaacaattgctttacctgcaaaatggacctgatcttcaatgttggtcggatcattcatttaacctttggacactaaacagtattatttaatgtacgttgggtttcttagcccatgccacatacatttacggtaagctagtgaattcagctaatttctaggcaccaggaatgtatatctggcttaacatgttttaataatcaaagtggggagaaagggaaaaagggcatgggcaatattatatataaagcaaaaagggagaactttgatcatgtgcttcagctgagctgtcagccttctttttggtgacgacttgatataagttactattgacttccggattatatgatatctgtctacattcttttattccacgtaaatggtgctggtgatatgaacccccatccttattcctcaaaagaaatcagaagaagcaaaggagttagtgaactgtgataagaaaaagatacacttggcagtatgttcccaaataggactatgcattggatggatggtttgtttaaatacagttacaattagtgatgtaacttatgtttaatatttcacaatattttggtgtgctaactaaatttgtcaaattggcagagtgagcggcttaggcagtccatattggagaaagttcaggcaaagcaatttgaggcgctggcctctgttgaggataagatacttagaaaaatacgggataaagaggcagaagtggagaacattaacaaaaggaactctgaacttgaggaccagattaaacagttggcagtggaagttggtgcgtggcagcaaagggccaagtacaatgagagcatgataaacgcactgaagtacaacttggaacaggtatgtgcccatcaaagcaaggatttcaaagaaggttgtggtgatagcgaggtggatgacacggcatcctgttgcaatggtggtgccgccaatttgcaactaatgccgaaggagaacagacactccaaagatttgaccgcatgtagagtctgcaagtcaagcgaggcttgcatgctattgttgccttgtcggcatctttgcctttgcaaggagtgcgaaagcaagctgagcttctgcccgctatgccagtcttcgaaaatacttggcatggagatatatatgtagaatagaatttatgtattactcgagtatcgtcccagatactgctgtgtttatacaacagtctattgttaaactgtaccactagtatggaccaacatgagatgccactggatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0263800, RefSeq:Os03g0263800