Os03g0264800

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Revision as of 12:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0264800| Description = AAA ATPase domain containing protein| Version = NM_001056179.2 GI:297600701 GeneID:4332344| Length = 7670 bp| Defin...")
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Gene Name

Os03g0264800

Description

AAA ATPase domain containing protein

Version

NM_001056179.2 GI:297600701 GeneID:4332344

Length

7670 bp

Definition

Oryza sativa Japonica Group Os03g0264800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8771024..8778693

Sequence Coding Region

8771024..8771077,8771563..8771668,8771771..8772012,8772829..8773020,8773391..8773544
,8773613..8773700,8773776..8773854,8773963..8774044,8774121..8774218
,8774423..8774491,8774570..8774668,8775429..8775594,8775707..8775751
,8775841..8775902,8775980..8776087,8776274..8776324,8776398..8776499
,8776917..8777003,8777115..8777378,8777532..8777669,8777892..8777953
,8778072..8778404,8778498..8778693

Expression

GEO Profiles:Os03g0264800

Genome Context

<gbrowseImage1> name=NC_008396:8771024..8778693 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8771024..8778693 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcggacatggatatgccagatccggaggagctcgagtggatggagagccacgggctcctcccggaggaggaagaggagtacgcctacttcgacgaccccgaggacgaggggttcctccctgccgccgccggagcggaccagccgcggcgttccccgcaggagaccaccgctgccccctcgaaacctgcagatgaagtgtcggaaggcaatttgaagcggcctccccctccgcctccgccggagcagggggaggagaggagcaagcggaggaatgtggatcgtgaggattccggggatggggacgaggactggctgcggtactcgccgcctcctgttgttgaagttgtcgccgagaagacaatctcgcggttcgcgtcggacatccggggggactgtatgtctgtcaccgcgcccaatggtgagagggtttatgcgaaggttgcaacagacgggttggatgggggaggaatcgggggaactagacaaaggactcgcatttccaaaccaaatttcaattacaaggggcttctctcagaatcctttcattcgctgacaagtcgtgctgagcaagaggctctagcaaaggcattgcaggagagtgcagaaacacaaaatcttgagagttgcccagtgactccgctagttacagagcaactttgggtggaaaaatactcaccaaattctttcacagagctgttaagtgatgaacacacaaacagggaggtacttctgtggctaaaacagtgggactcctgtgtgtttggatcccacgttcgtgctacaggtgatgatgttttgtctgccttacgccgacattcttctgctattcaaaagaattcaagtaacagaaatttcttctccaagagtaagggaggtcctggtatgagtcaagacaacatgctccaaaatgcacatggtagcaactcagaggatttgacaagctcctttaacaagaggcccacgactgataatgcaccagaacaaaaggtgttactactatgtggtccacctgggcttggcaagacaacacttgcccatgttgcagctaaacattgtggctaccatgttgtggagataaatgcgagtgatgatcgttctgcttcatccattgaaccgaaaattcttgatgtcattcagatgaactcaatcatgtctgattcgaaacccaagtgtctggtaattgatgaaattgatggagcacttggtgatggcaaaggtgcagtcgagatcaatgctgaaaagaacaacagttctaacagcagcactagtgctgaagatactcaagtacgaaagtcctcaaagaaaggtcacaaaataccaaaactgatgagacctgtaatttgtatatgcaatgatctttatgctccagctctgagacaacttcgccaagtagctaaggttcatatgtttgttcagccaacgattagtcgtgttgtcaacaggctcaagtacatttgcaaaaaggaacggttcaagacaagtccaattgccctttctgcattagcagagtatactggtatggtttcttttgctccattcaccatcgtgagatcaagtgcatacactgtagttactagtaacctaagtaactgcaagcaggaaaatcagagaagactaattgaacaaagcctccctgcagaatgtgacatccggtcatgcctgaacacacttcaatttttgaacaagaaaagagaggcattaaacatttcaggattcgattcacaagttattggacggaaggacatgtcaaaaagcataattgatgtatggaagcaggttctgcaaaagaaaaaactcaagaggattgaaaaggttgatagtaattttagcagaggcaaggacatcgattctctcttctcactcatttctaaccgtggtgactatgatgttactatggatggaattcacgagaactttctgaaacttaattatcatgacccgatgttgcaaaagacggtgaaatgtctcgatatacttggagtttcagattctttgatgcaatatgtttatcggactcagcagatgtcacttcatgtatatcagcctcctgttgccataactataagccaactggttgctcaagttgagaaaccaaatattgaatggccaaaatctttgcagaggtgccgaacaatgcttttggaaaagaaggataaactgaagacctggcaaaaccaaatgtcaccgctaatttctaggcacctgtcagtagaatcttttgtggaggacattgcttctcccttcttacatattatttctccatcgagcttgagacctgtggcactgaatttgctgtcagagagagaaaaggatgaacttgtgcagctagttgataccatggtttcttactcaattacatacagaaacacaaagttagagcctcaagaaaggataagtggatctatggtgtctcctgatgttccttcactttctcttgatcctgcaatcaatgatattataaacttcaaggtagagaagcaaaagatcatgaaagatagtgctggcaaattgttgaaccaagccaatgaaggagataagagaaatgaagtttccgtaagtgagaaaaaatctgcattggtttctaccaagagtacctccaagagcaacccgactacacttaagatgcaattaagctcagcatctagtatgagtggtaaagatcctgcacctgcaaagaagcactccaaccacggaattaatttctttgataggtttagaaaagagagaccagtggatgcaaaagctcgaaatgacgcagggcaacaagtagctacaactctaagagactcgcgtccactgatcttcaaatacaatgagggcttcacaaatgctgtaaaaagaccagtgaaagttcgagatcttctgctctag</cdnaseq>

Protein Sequence

<aaseq>MEADMDMPDPEELEWMESHGLLPEEEEEYAYFDDPEDEGFLPAA AGADQPRRSPQETTAAPSKPADEVSEGNLKRPPPPPPPEQGEERSKRRNVDREDSGDG DEDWLRYSPPPVVEVVAEKTISRFASDIRGDCMSVTAPNGERVYAKVATDGLDGGGIG GTRQRTRISKPNFNYKGLLSESFHSLTSRAEQEALAKALQESAETQNLESCPVTPLVT EQLWVEKYSPNSFTELLSDEHTNREVLLWLKQWDSCVFGSHVRATGDDVLSALRRHSS AIQKNSSNRNFFSKSKGGPGMSQDNMLQNAHGSNSEDLTSSFNKRPTTDNAPEQKVLL LCGPPGLGKTTLAHVAAKHCGYHVVEINASDDRSASSIEPKILDVIQMNSIMSDSKPK CLVIDEIDGALGDGKGAVEINAEKNNSSNSSTSAEDTQVRKSSKKGHKIPKLMRPVIC ICNDLYAPALRQLRQVAKVHMFVQPTISRVVNRLKYICKKERFKTSPIALSALAEYTG MVSFAPFTIVRSSAYTVVTSNLSNCKQENQRRLIEQSLPAECDIRSCLNTLQFLNKKR EALNISGFDSQVIGRKDMSKSIIDVWKQVLQKKKLKRIEKVDSNFSRGKDIDSLFSLI SNRGDYDVTMDGIHENFLKLNYHDPMLQKTVKCLDILGVSDSLMQYVYRTQQMSLHVY QPPVAITISQLVAQVEKPNIEWPKSLQRCRTMLLEKKDKLKTWQNQMSPLISRHLSVE SFVEDIASPFLHIISPSSLRPVALNLLSEREKDELVQLVDTMVSYSITYRNTKLEPQE RISGSMVSPDVPSLSLDPAINDIINFKVEKQKIMKDSAGKLLNQANEGDKRNEVSVSE KKSALVSTKSTSKSNPTTLKMQLSSASSMSGKDPAPAKKHSNHGINFFDRFRKERPVD AKARNDAGQQVATTLRDSRPLIFKYNEGFTNAVKRPVKVRDLLL</aaseq>

Gene Sequence

<dnaseqindica>7617..7670#7026..7131#6682..6923#5674..5865#5150..5303#4994..5081#4840..4918#4650..4731#4476..4573#4203..4271#4026..4124#3100..3265#2943..2987#2792..2853#2607..2714#2370..2420#2195..2296#1691..1777#1316..1579#1025..1162#741..802#290..622#1..196#atggaggcggacatggatatgccagatccggaggagctcgagtggatggagagccacgggctcctcccggaggaggaagaggagtacgcctacttcgacgaccccgaggacgaggggttcctccctgccgccgccggagcggaccagccgcggcgttccccgcaggagaccaccgctgccccctcgaaacctgcaggtgcgtgcacagtctccctcacggtagatggtaacctagtctcgagagtattttgtttcgactgctgatgcggttggccaaatgtgtgtgaagatgaagtgtcggaaggcaatttgaagcggcctccccctccgcctccgccggagcagggggaggagaggagcaagcggaggaatgtggatcgtgaggattccggggatggggacgaggactggctgcggtactcgccgcctcctgttgttgaagttgtcgccgagaagacaatctcgcggttcgcgtcggacatccggggggactgtatgtctgtcaccgcgcccaatggtgagagggtttatgcgaaggttgcaacagacgggttggatgggggaggaatcgggggaactagacaaaggactcgcatttccaaaccaaatttcaattacaagggtcagttactaagtgtacttctattttgcgctttcaaatatctcctgagaaccaacatgcactcgactaatatttttgatagcccattatattgctttcgccttttgtccttctgcagggcttctctcagaatcctttcattcgctgacaagtcgtgctgagcaagaggctctagcaaaggtatatgtgtatatgagattattgacaatagttttttttttaaaaaagtgaagtactctttaagtaatgataattaacattattttatactgaatagatggtacaaatggtttcttttttaccataacattttttcatccgctcaagaccatgttgattgcagtaggtcataagctaaatgcagtatatcttactgatccatattttgcaatggttatgaaggcattgcaggagagtgcagaaacacaaaatcttgagagttgcccagtgactccgctagttacagagcaactttgggtggaaaaatactcaccaaattctttcacagagctgttaagtgatgaacacacaaacagggaggtaaatgtctattcaactctcttaaaatatatacttataaataaggcctttactgcaataatctccttccgccatagagattttgctatttggtgtcaggtttccagtgtgtgcttgagtttctcttgacatgtacggatgcatgccattcaggtacttctgtggctaaaacagtgggactcctgtgtgtttggatcccacgttcgtgctacaggtgatgatgttttgtctgccttacgccgacattcttctgctattcaaaagaattcaagtaacagaaatttcttctccaagagtaagggaggtcctggtatgagtcaagacaacatgctccaaaatgcacatggtagcaactcagaggatttgacaagctcctttaacaagaggcccacgactgataatgcaccagaacaaaaggtggcttagtagcattgttttgtatgtctttagtgatatgtttgaccgcaggatatatttctaccaagaagttgctggctagtgcaattagataacatttcgatgttgcaggtgttactactatgtggtccacctgggcttggcaagacaacacttgcccatgttgcagctaaacattgtggctaccatgttgtggaggtctgattatgtgatttcatgtcctttgtgtagttctttttggttcttcaacatagtgttgtataatctgttatgtttgactgtttggtcatatataacgaggagtatacaccccttttatctggtactgcatcaaacatatctgttgatatccttccaagttgtctactgttctgtacataccatctagtcacgaattgatttcttccgtttcatattattttggtacattttataagctggaaaactgggaccattgcaatttttattagaaaataatgatatgctcttagcagaatttctctgacctcatcacctcttgttagttatggtttattggctaattgagtattagaatgttgggccctttatctttggttaaaaatttatacactacttacatcatactacatgcagataaatgcgagtgatgatcgttctgcttcatccattgaaccgaaaattcttgatgtcattcagatgaactcaatcatgtctgattcgaaacccaagtgtctggtgagttgaatcatgctgtcagataaataaattacctccactgtatcctatagacctctgctgtcttgtgtaggtaattgatgaaattgatggagcacttggtgatggcaaaggtgcagtcgaggttattttaaagatggtagcacctaatccacactttcaacaacatgatgttttgctaccttttcttactttccctctcttcttgttttttttatggttctgcattatgctagtgataaatgctgcatcaattctagcttaattcatatgttactgtagttcattgataattgactcttttgtgcagatcaatgctgaaaagaacaacagttctaacagcagcactagtgctgaagatactcaagtacgaaagtcctcaaagaaaggtcacaaaataccaaaactgatgagacctgtaagcaatctagccattccttgccataattttagcgccttaacattatgattaaataataatgcatttatttacaggtaatttgtatatgcaatgatctttatgctccagctctgagacaacttcgccaagtagctaagtaataattcttgtgtggtttttactgtaattctgtgccgttgttaaatcatctaagcatttcttacaaggacttgcttaaatttacagggttcatatgtttgttcagccaacgattagtcgtgttgtcaacaggtacttatgtaaaaatactcttgttacatctcactacaccaaacttttttttatgtagccacaatatattatggtccatgttgttaatgaccatgtctttgttgggtcttaggctcaagtacatttgcaaaaaggaacggttcaagacaagtccaattgccctttctgcattagcagagtatactggtatggtttcttttgctccattcaccatcgtgagatcaagtgcatacactgtagttactagtaacctaagtaactgcaagcaggaaaatcaggttccacaaagtgtgtcagcatgtagatcctttagttatatacattttaattgatttcaatacataatataggaaaaccaaataaaaataccaggacagttgtgttatatttcatatgctaaattttgttatgtaggagaagattgatctatacatagcccagtctatgcctagttttattttactgaatatggtaacaccaatctagtattagttgtgttgagggtaacatgtatataatgcagtaacgtgctactatagcagcagggcactttatacctatgcatagtccttgtgatgaaactaattattatgtatcaatgagccatgcactgtaggtgctttgttcgccataaatctaggtagttttgtaaaataagtacaggtttacaaaaacagttaggtctctataaatataagaagaagtgcacaagtatcattcaaaaacttgcattgaatgtgcactaatccactgcaggcctactaaagctgatcttgactctgggttgctgtaagattttcttttgaagtaatgttgtaagcaattgcacattccatcattcatcaatataaagcatgcataatcttaatttaacttttaatctttgatatgacaagtggcaaccaattattttacctatttgttgccatgcatttttttcgcttgtattatttatttctcaatggacggatagggaaatggaaagcaacagcaccaatctaaatttgttgttcatgatatgtgtgtttgtttccatagagaagactaattgaacaaagcctccctgcagaatgtgacatccggtcatgcctgaacacacttcaatttttgaacaagaaaagagaggcattaaacattgtaagtgaatagattgaaacactcaccctttatttaatggataattgccttttctcaacaaaatgtgttatggagcagtcaggattcgattcacaagttattggacggaaggacatgtcaaaaagcataattgatgtatggaagcaggtctgatcttcttcctgtaactcctcttttccctgtatactttcaattctacaaggaattattgcgtcgttcaaaagtttcagcaatgatgtttaattaagtgctgaacataattcacaactcaaattacacttgcacttaaaaaccagcaacaaattgatcaccgcatcatttgttagtttaattagtttagttgcttcataggttctgcaaaagaaaaaactcaagaggattgaaaaggttgatagtaattttagcagaggcaaggacatcgattctctcttctcactcatttctaaccggtaagttttctgcggttgatttcatgctttgtttcttagaattgcttcactttttcacatcacatcatgtgtacagtggtgactatgatgttactatggatggaattcacgagaactttctgaaacttaattatcatgacccgatgttgcaaaagacggtatgtgcatgaaatcctgattctagttatattacaggagttttattttttattttctgcttctgtaaatatatccgtgaacttgtctaactccaaaagaccttacaggtgaaatgtctcgatatacttggagtttcagattctttgatgcaatatgtttatcggactcagcagatgtcacttcatggtagcatccaattttttattgtatttgtttgtataaatacttgactaacttacatagtttgactctgtacttcagtatatcagcctcctgttgccataactataagccaactggttgctcaagttgagaaaccaaatattgaatggccaaaatctttgcagaggtaattcttgcgcattgatagagctatcagctatccattagcaggattaatgtggatatatttttcaggtgccgaacaatgcttttggaaaagaaggataaactgaagacctggcaaaaccaaatgtcaccgctaatttctaggcacctgtcagtagaatcttttgtggaggacattgcttctcccttcttacatattatttctccatcgagcttgagacctgtaagttcttacttaggtgtgctaatcattgatatggaccttccctgtttgcacatagtaatttttctgtttaatttcacttgagttgtaagatcaagaattaaaataaaggatggcatagtaaaatgtctatgccattaacccaaaacatcctgcaatacccccacaaatgaaggatggagtgaatacccttgccaatttaacaaagcgactaaccactaaaaatgagttagatcttagtttggaactgatgagttgtaagaggttttgcaagaaagtagcactgcaactttctattactactagtatttttgtacatattatcatctcttttaggttgctgaatgctgacattataagatttgttcaggtggcactgaatttgctgtcagagagagaaaaggatgaacttgtgcagctagttgataccatggtttcttactcaattacatacagaaacacaaagttagagcctcaagaaaggataagtggatctatggtgtctcctgatgttccttcactttctcttgatcctgcaatcaatgatattataaacttcaaggttctttttgaaacttctgtcctattttaccctaccgtgctcttctcactgtaaatgacagagcttctcatgttagggatatcaatctgagcatattggtctctctttggccatgaaacaagtcttggtgcatgaggtcagtggcatttctaacttctatgagtggattcctttatttatttctcatgcttagtgcttgctaccttcacaacacctaatttgctttaagtaggagtaacttctaagttctaacctatttgcaggctaaaaatcattgcttctatgcaacacttatctgatagccatctgttacgtacttataattgcttggcaaactatattgaacctggaagtattagcatctcgtgctggtggtaataagctattgaacaaagtgattttaactatacaactttgaattgtacttttctgcaaaagttctaagggccagagctgttgaaatgaaagttacttgccatagtaggataaccatgtcccagcagtagcactggttttgacttctgaattttacaagcacttaaatagcattaacttgtacttggagctttagaacgtgtggatgcagcagaaatcttcttttgtatctatatagattacttccttttcattggaaggctgagcttaagtatcagttctatatttcacttccatgtgtttgctacttgaacttttactattatagttttaatttttattctcaatacagatatctattgccagaagcctttcatattgggaaatttcctattaaaagaagattttattctctgaccaatgtatgttgttgcttttcaggtagagaagcaaaagatcatgaaagatagtgctggcaaattgttgaaccaagccaatgaaggagataagagaaatgaagtttccgtaagtgagaaaaaatctgcattggtttctaccaagagtacctccaagagcaacccgactacacttaagatgcaattaagctcagcatctagtatgagtggtaaagatcctgcacctgcaaagaagcactccaaccacggaattaatttctttgataggtaatttaatactgataatttcattagacatcaagatgcaattattattgcaagacggtgataataaaggcttttttttcctcgttaacacaaaaaatacaggtttagaaaagagagaccagtggatgcaaaagctcgaaatgacgcagggcaacaagtagctacaactctaagagactcgcgtccactgatcttcaaatacaatgaggtttgctccttgagttattcatcatgatgccacaatttggatctatctttaactatctttgtgcgctcattactataaggaatacattggaaacccacatgacctgcacttagtagtgccaaataaacagtaactataaactgctattgtcacatttcctgttattactgaagttcattacgttatcttacttacattgctgttaaatctatatacttacagcactagacaatcatttgattctcgaagtgagtatttttacttgctcagagccccagttatgaacagatcctgctcgattttgtctcagaattaacacgtggttctttttctaatggggacataatgttgcgcataatgctgtggcgtttgagttattcctctgtattccctttttatttctgtccacttccactcaattgtcgttagagtttggactcgtgtttcttgggcaatgtcactaagaagttttttttcatttacagggcttcacaaatgctgtaaaaagaccagtgaaagttcgagatcttctgctctag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0264800, RefSeq:Os03g0264800