Os03g0268000

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Revision as of 12:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0268000| Description = Similar to Protein phosphatase 1, catalytic gsmms subunit| Version = NM_001056204.1 GI:115452136 GeneID:4332369| Len...")
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Gene Name

Os03g0268000

Description

Similar to Protein phosphatase 1, catalytic gsmms subunit

Version

NM_001056204.1 GI:115452136 GeneID:4332369

Length

5470 bp

Definition

Oryza sativa Japonica Group Os03g0268000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8934866..8940335

Sequence Coding Region

8934993..8935212,8937591..8938150,8938236..8938424

Expression

GEO Profiles:Os03g0268000

Genome Context

<gbrowseImage1> name=NC_008396:8934866..8940335 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8934866..8940335 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcaccgggggcgggagggcagggcggcggcgggatggacgccgtcctcctcgacgatatcatccgccgcctgctcgaggtgcggacggcgcgcccggggaagcaggtgcagctctccgagtcggagatccgccagctctgcactgtatcccgagaaatcttcctcagccagcccaatctcctcgagctcgaggcgcccatcaagatctgcggtgacatccatggtcagtacagtgaccttctaaggctttttgagtatggtggttttcccccagaagccaattatctattcttaggtgattatgttgatcgaggcaaacaaagtttggaaacaatatgcctcctccttgcatacaaaatcaagtacccggagaatttttttcttctcagaggcaatcatgagtgtgcatcaataaacaggatatatggattttatgatgaatgcaaacgccgatttaatgtgcgtctatggaaggtcttcactgattgttttaactgtctccctgtggctgcgctaattgatgataaaatattatgcatgcatggtggcctctctcctgatctgacacatttagatgagataaagagcttgccccgtcctactgatgtaccggatacaggtctgctatgcgacctactttggtcagatccaggaaaagacgttcaaggttggggcatgaatgataggggggtctcatacacttttggtgctgacaaagtttcagaattcctggaaaaacatgaccttgatcttatttgccgggcacatcaggttgttgaggatggatatgagttctttgccgacagacaacttgtcaccatattctcagctccaaactattgtggtgaatttgataatgcaggtgcaatgatgagtgttgatgaaactttgatgtgttcttttcaaattcttaaacctgctgagagaaaaggcaaatttatggcatcaaacaaaatgtga</cdnaseq>

Protein Sequence

<aaseq>MAAAPGAGGQGGGGMDAVLLDDIIRRLLEVRTARPGKQVQLSES EIRQLCTVSREIFLSQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLG DYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLW KVFTDCFNCLPVAALIDDKILCMHGGLSPDLTHLDEIKSLPRPTDVPDTGLLCDLLWS DPGKDVQGWGMNDRGVSYTFGADKVSEFLEKHDLDLICRAHQVVEDGYEFFADRQLVT IFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAERKGKFMASNKM</aaseq>

Gene Sequence

<dnaseqindica>128..347#2726..3285#3371..3559#ctctctctctctcctcctcggccgcgtaaaacacctcccaccgcctcctccaccccctcctcctccccccgcagagccgaaaccctaactccgccgatctctccaggtgcccaaggggagggaggggatggcggcggcaccgggggcgggagggcagggcggcggcgggatggacgccgtcctcctcgacgatatcatccgccgcctgctcgaggtgcggacggcgcgcccggggaagcaggtgcagctctccgagtcggagatccgccagctctgcactgtatcccgagaaatcttcctcagccagcccaatctcctcgagctcgaggcgcccatcaagatctgcggtacgtgctcgcccccccccccccccccccaaaccctctcccgccgtcgtgtagatctgctttggccgcgcggccgaaagctggtgtattgtgggggagactgcttctctgtgtcgcggccttgaacaaggctagcatcaatctgtctctcttggaaagtatggtcaagggcgttatctattttttttgcaacttttttctcgattgtagttctcgtgaggtagatttttattgaacaggttgtttcgtgaacattttcaaaacgagcacattcacaagggctgagtgagatttcctttaattctgactgtgttatttcaaattttattagttcgcttgatattttaattttcggtattgttcgtgtgcacagcagcttctattgtctagcgccatctgattctactagataattaaacctatctgtcctgacaactgttcgtccatagatgatttgtaacaacatctagttaggcacggcagagtgtagatagggtcatgttgaattgttttctcctgatgacactgattaatgatgaaacgtcaaccactttgtacatgccaatttgaaaatgacttcaagtttgttgacttgattttctgtggtcagtgagttaatagtaaatgtgggcagctgtaaccacttccaggtttgcagccgtattgaaattcccaaccatgaattcgtaattctgcagtagtttccttagcaatacgatctactgagcatttgctcattgagaacaccagttggtagactatttatttgctactttcatgtattgttagtatttttatcctctgctgttgaattgctggcattgcatcatattcggtgaaacattgtaatcatgaaaatgagattatctatattagcggtagcactaatcatcccgtaagctagtgcctccttttccgttcccagcaaccatcctgtttttttttctgttcctgtccctccacttcggcatcccctctcccgtgatcccgtcttttatctgaataaaaagttactatcctggtatcccctgccgccctcctgctttttaagtccgtccacttctgcatctctctctggtccgagtaaaataattacaactttgagatttattcttttttttataaaaaatactgtatgtcatctgagtaaaaaaatacttctataagttcaattaaaaaacccactccctattaaggtggatcagtggtaaaagaaattatacacattcgtcttgtctttgcgtttaggttcattagtgatgttgtgattagtaacatatttactccgatcttccggacaacaaaaaaaagacgagtaaatcttacaccgacggctaacctcaccatagtagtgtccttggctgcagatctcccaggaggggccagtttcctccctgctcctcccgctgacggagatggaggagcttggcgaggtcggtgaagtagggaagcacgagaggagcagatagcacggattgcgttgattgcgcagatctgtcgccgatggcctcgtccttgacccaacctccaccttgggctttgcttgcgttggaacctctgcctcgcttccaatctgtagcacactgccacagtcgccatcgatttgcagttgatctccgccgtggaggcaccgcttgccaaggggtggggatatggttatggtgcgctagtaaactcactatgtcccaaaatatagcaagttttagctatgaatctggacaaccacttgtccaaattcatagctaagagttgttatattttgggatggaggtagtagcggaatggaacggataagtgggagagcatggtgtggcatagtgtgtgacgagggtattggaggcacgctacatgagctaaatagggtgctaatgctctgtgcaataattctcctaaattagagtgaatttcataaactgcaattaatttatcaaaaccattgctttgctacaactttagatgggtatttcacacaatagcaaacgatttatcacaaaaccgcacctttagcccccctttgtgtgtatgacaggtgcgactaaaacttgccaggcaaataaaattgcagttttctgataaaatcgtacgctattgttgcaattctctgaagtgtctagataaagttgcagtaaattgataattttgacaaaatagttgcagttatctgaaatttactcttttatattatctactacagcacctgtttgtgttgtattcatctaaaaaaagggttgtgtttattggagtccaaaataatgttgagctcatttctacttagcgccttcttggggagtttcaatctgtagtgagcctgtaaatttgtagctggtggctctaaggtgtgtatttaacttttttttcacttgtcatttggtatccaggtgacatccatggtcagtacagtgaccttctaaggctttttgagtatggtggttttcccccagaagccaattatctattcttaggtgattatgttgatcgaggcaaacaaagtttggaaacaatatgcctcctccttgcatacaaaatcaagtacccggagaatttttttcttctcagaggcaatcatgagtgtgcatcaataaacaggatatatggattttatgatgaatgcaaacgccgatttaatgtgcgtctatggaaggtcttcactgattgttttaactgtctccctgtggctgcgctaattgatgataaaatattatgcatgcatggtggcctctctcctgatctgacacatttagatgagataaagagcttgccccgtcctactgatgtaccggatacaggtctgctatgcgacctactttggtcagatccaggaaaagacgttcaaggttggggcatgaatgataggggggtctcatacacttttggtgctgacaaagtttcagaattcctggaaaaacatgaccttgatcttatttgccgggcacatcaggtacaattttaatgcaacatcttttcctttcagtattttttttggtcaactgaggtgatcatatttatatttcatgtgatgtcaggttgttgaggatggatatgagttctttgccgacagacaacttgtcaccatattctcagctccaaactattgtggtgaatttgataatgcaggtgcaatgatgagtgttgatgaaactttgatgtgttcttttcaaattcttaaacctgctgagagaaaaggcaaatttatggcatcaaacaaaatgtgaaatggtgaagcccatttcgctcatagcgactctgaggtcagttgcattaccttgttccataagtttgccatatagtttgtgtggcttgaaaatgtaacatgtttactgtgtgctgcatttaactattcacttgaaaagttttaaaatgtatggtgtatttgctctatgtttgatgtagtaatgtgtatcataacttacaactaaattttattttataagtatgttaagttgttcttagtttttcttatagtttgttgtatgtgttggccttgatatttctctccggagtaaaattggctctaccttataggccatacctgtatcagaattttatcccagtagcatatggtacacaaaaaaaaagctacctgtccatggagagtaaaagaattgattaggtgctttgttctccattgctgatgttatgcaggtaggaatacaaaatagatccctagtcgcctccgcgcaaatctattttgtatgtattacactagttgagtagtcattatcttttgagtagtcgttagtactcccttcagtcgcaaaaacatataatgtattattcatgattatactttgttttggaaaattgctagcagaaaattacttgttctacactaagcaatataatagtattgctagtgtttttccaccaataacattttccagaataaaatccttcaattgtattgtgcacaatcttgtggagtactccctctgtcccataaaaaaccaacctagtaccggatgtgacacatcctattactacgaatctggacatatgtcgtactagaatatgtcacatccggtcctagattcattttttatgggatggagggagtaagcagaaagactatgctggtcgccttgttgacaatcgccataccaggtcaagttcatagtgcctactttgagttacaaattgtaaccttggaatttcattaggttattggtttggttcaccagcaggtgttatgcactcagtgaatatgaatagaataatttaggagcccttcagacgatacagttgttaatttatggttttttattaaaaaaacactattttttgtccttttgatataattattgattgaaataatcttatctgggcctgtaactgtgagttgtgacatcatagttggaaacataatttggcaatataatgtgtggagagaaacaactgcaaatcgggcccaccaccaattttgggagaatatttcacatatacaaccataactcatttgcaagagcctagctcatcatgtaagtaggctggtgcagtcgtacggcaaatgttctgcttgtgttaggcagataatcaaccatcacaaatgttctgctcgtgttagtcagatatgatactgcaaacatcattttatggtttcagctggttggcgcttaattatgatcatgtctactgtaggctgtcctgtggatgcatctagacatcaacgtgcaggcgttaggcttgaagcaacattgggctaattctaccggagaagccaaataatatcatatctaacagttggtctggaaggttactcttcatggcaagtgccaattttttttccattttctgttatgatgcgtgaaactatcttgtagatgtagatatattgattatggaaggatgaagttgccaattgacctgaggcggtttccttctgcagccaggaaaaatctgaatatggagtttctgtttggtagtttcactatttaaaagcacatgtatcacttgtatggaggtaacaactttacttatgcaagcccgtgttttctgttgcttgtaagcaaaattggatgagtttttatcttgttttctatagcgtgctaatattgccaatggcaacaatttgcgaactgcaattctagaatgtactggatgattgaacctttaagcatttgcgaact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0268000, RefSeq:Os03g0268000