Os03g0268100

From RiceWiki
Revision as of 12:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0268100| Description = Conserved hypothetical protein| Version = NM_001056205.1 GI:115452138 GeneID:4332370| Length = 3229 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0268100

Description

Conserved hypothetical protein

Version

NM_001056205.1 GI:115452138 GeneID:4332370

Length

3229 bp

Definition

Oryza sativa Japonica Group Os03g0268100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8942907..8946135

Sequence Coding Region

8943064..8943139,8943227..8943336,8943444..8943614,8943713..8943817,8943897..8943986
,8944274..8944314,8944488..8944656,8944748..8944900,8944963..8945031
,8945117..8945194,8945302..8945355,8945438..8945512,8945631..8945653
,8945736..8945823,8945952..8945987

Expression

GEO Profiles:Os03g0268100

Genome Context

<gbrowseImage1> name=NC_008396:8942907..8946135 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8942907..8946135 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagccaatcacgcctcgcgggggcgccgcaccctggaggagatccggcagaagagagccgccgagaggatgcagcagcagcacaacccggccgccgcggcgtcccttgtcgacccttacgggaacccaggagccggagctgagcttcttggtcgagttagagaacttgaaaatgggaacatagcattggagagggaaaaccaaatgctgttatccaagattgctgagaaggaagtcgagaaggattccctcgttaaccgcttgaacgaccttgagcggaatatagtaccctccttgaaaaaggctgtgaatgacatttctttggagaaagatgccgcagctgttgctaaggaggatgctctcgcacaactaaggagcatgaagaaacgactgaaggaggcagaagaggagcaatacagggcagaagaggactctgcatcattgagagcacagttaaataccctgcagcagcaagtaatgagcaactcttatactggatttccagttggtgtatcaaatgagcacattcttgctatggaaaaggaggtagaaaatttgcaggctcagctgaagcaagaatcattgctaaggcagcaggagcaacagaaactttctgaagagtccctattaaggcaacaagagcaacaaaagctaactggagaacagtctcatgctgcttccttggttgcggaaaagaaagagttggaagaaaaaattgctgccttgacgaagaaagcatcagatgaagcttctgaatttgctgcacgcaaggcattttcaatggaagatagggaaaaacttgaaagccaattgcatgatatggctttgatggttgagaggctagagggcagccgccaaaagttgttaatggagattgattctcaatcatcagaaatagaaaagctgtttgaggagaactcagccttgtctacttcataccaagaagctgtagctgttacaatgcaatgggaaaaccaggtaaaagattgtctcaagcaaaatgaagagctacgctctcacttagagaagttaagacttgagcaagctactctattgaaaacaagtaataccactatccagccagatgggcagaacgagaccagcatttcattcccgccagagtttgtaactgagaatctctccctaaaggatcagctcatcaaagaacagagcagatccgaggggttgtcggcagaaataatgaaactttcagctgaactcagaaaagcggtgcaagcgcagaataacctcgcacgcctatatagacctgtgttaagaggcatagagagcaacttaatgaaaatgaaacaagaaacatatgcaacgatccagtaa</cdnaseq>

Protein Sequence

<aaseq>MEANHASRGRRTLEEIRQKRAAERMQQQHNPAAAASLVDPYGNP GAGAELLGRVRELENGNIALERENQMLLSKIAEKEVEKDSLVNRLNDLERNIVPSLKK AVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLRAQLNTLQQQV MSNSYTGFPVGVSNEHILAMEKEVENLQAQLKQESLLRQQEQQKLSEESLLRQQEQQK LTGEQSHAASLVAEKKELEEKIAALTKKASDEASEFAARKAFSMEDREKLESQLHDMA LMVERLEGSRQKLLMEIDSQSSEIEKLFEENSALSTSYQEAVAVTMQWENQVKDCLKQ NEELRSHLEKLRLEQATLLKTSNTTIQPDGQNETSISFPPEFVTENLSLKDQLIKEQS RSEGLSAEIMKLSAELRKAVQAQNNLARLYRPVLRGIESNLMKMKQETYATIQ</aaseq>

Gene Sequence

<dnaseqindica>2997..3072#2800..2909#2522..2692#2319..2423#2150..2239#1822..1862#1480..1648#1236..1388#1105..1173#942..1019#781..834#624..698#483..505#313..400#149..184#tttgggtttcttccccttctcttctccgggcatcacaggatcgaggcgataccggaggagcccccgccatcggccatcctccttcgcgtcgcgcctccggatcccgagcttccagaaagccgaccggttcgtcggccggtcgccggagatggaagccaatcacgcctcgcgggggcgccgcaccgtatgcctctcctctcctctccctcctgcttctctgtgacgcgaggcgtttcagatccgcgtctcgtttgtatctgggatttgaggctcaaatttgtgttggggtttgtgtgcgcgtttgtctggcagctggaggagatccggcagaagagagccgccgagaggatgcagcagcagcacaacccggccgccgcggcgtcccttgtcgacccttacggttggtccatccctctcttcccctggaacagttcgtagttcagtgctaatcttgtgggcttaatggcgattgttttctgtagggaacccaggagccggagctgaggtttgcccccctttcctttgtgtcgaatagttcggatgaacattgatcgtggcaagtacgtatccaaattctcatgttgtttctagactataactaaggcttttggtatgaatggtagcttcttggtcgagttagagaacttgaaaatgggaacatagcattggagagggaaaaccaaatgctgttatccaaggtattttctctgcagttcagtattgttgtggtacagttacctgaaggatgaagtagtattaacaaagcatagcttcgtctagattgctgagaaggaagtcgagaaggattccctcgttaaccgcttgaacgaccttgtgagtttcatattgtgcattttaatttggtacttgtgttgcagtttgatgcatatggcttacattttgcacgcgttttactttggggattaattcgctgtttgcaggagcggaatatagtaccctccttgaaaaaggctgtgaatgacatttctttggagaaagatgccgcagctgttgctaaggtacttgactgtcttcgtgtttatggtattcacgattctgatatgtctaatccccattatcacttctacctggtatgctaagtaggaggatgctctcgcacaactaaggagcatgaagaaacgactgaaggaggcagaagaggagcaatacagggtattttgaaaaattgtgcatccttagtcatatcattagtgtgctaatcttatgatttacaggcagaagaggactctgcatcattgagagcacagttaaataccctgcagcagcaagtaatgagcaactcttatactggatttccagttggtgtatcaaatgagcacattcttgctatggaaaaggaggtagaaaatttgcaggctcagctgaaggtaggtcattttgtcttgcttcagtgttatgcttgtccttattattgattattctatctaagcaaactaacatataaaatggttaatgcagcaagaatcattgctaaggcagcaggagcaacagaaactttctgaagagtccctattaaggcaacaagagcaacaaaagctaactggagaacagtctcatgctgcttccttggttgcggaaaagaaagagttggaagaaaaaattgctgccttgacgaagaaagcatcaggtgcatatgaaacatattttgtagcttcatatagggtactctatctctagtaaacgtgccattcagcatagtcttttacttccacatttgtcatgctgctctgctttccgttccttcagatattccatattttactggtaaactgcatgaaataagtttcccctaccatgcagatgaagcttctgaatttgctgcacgcaaggcattttcaatggtaatgtatcgaacaaacttcaagttttttgtttttccatgagttaagattttgccaaggtaaatacttcatgtgttagtccatagttatcaaggactcaaaagtaaaactgagatgagatcttgcattacaacaggctaggtggacacctgtaagcctgaatgcccttgtcttaattcaaaattttcaggggtgattagaaacttgtaatgctaagtgttcgccgtaatcttcttgctgggctcgaatcaatcttaaactgtactggccattttttaattatgcaggaagatagggaaaaacttgaaagccaattgcatgatatggctttgatggttgagaggctagagggcagccgccaaaagttgttaatggaggtgtttgatgctgccttccttttctttgaacaaaataagttcccaatgagctggctaagttttggattgtgtttgacagattgattctcaatcatcagaaatagaaaagctgtttgaggagaactcagccttgtctacttcataccaagaagctgtagctgttacaatgcaatgggaaaaccaggtgtgctgttatcagtcatttcatgcatggagagacaaacatttatcatttatggatgataccagcatcttgcgtgttcaattaatcacaatttccaggtaaaagattgtctcaagcaaaatgaagagctacgctctcacttagagaagttaagacttgagcaagctactctattgaaaacaagtaataccactatccagccagatgggcagaacgagaccagcatttcattcccgccagagtttgtaactgagaatctctccctaaaggttgattgctggagctgtcgagaatattttcttgtctataccatgactagtcaaatctatttattgtcatgtcattggtttacaactgcatatttcattgtctacaggatcagctcatcaaagaacagagcagatccgaggggttgtcggcagaaataatgaaactttcagctgaactcagaaaagcggtgcaagcgcagaataacctcgcacgcctgtaagtatactattattgtttgtccgattctgcattttattttcccctctgtttggtgaaatttaactgttgccatcacttatgcagatatagacctgtgttaagaggcatagagagcaacttaatgaaaatgaaacaagaaacatatgcaacgatccagtaattttggatgaccgattattttccccccttacctgcctacacacaaaaggcagagcttacagcaagtaacgatcatttgtagagttacaatcaactatagtcaacattgttgtacgtgtacattcggttcactgttgtattatattggaaatgggggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0268100, RefSeq:Os03g0268100