Os03g0268400

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Revision as of 12:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0268400| Description = Similar to Mannose-1-phosphate guanyltransferase (EC 2.7.7.13) (ATP-mannose-1- phosphate guanylyltransferase) (GDP-man...")
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Gene Name

Os03g0268400

Description

Similar to Mannose-1-phosphate guanyltransferase (EC 2.7.7.13) (ATP-mannose-1- phosphate guanylyltransferase) (GDP-mannose pyrophosphorylase) (NDP- hexose pyrophosphorylase)

Version

NM_001056208.1 GI:115452144 GeneID:4332373

Length

3489 bp

Definition

Oryza sativa Japonica Group Os03g0268400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8959965..8963453

Sequence Coding Region

8960167..8960838,8960924..8961163,8961268..8961330,8962065..8962175

Expression

GEO Profiles:Os03g0268400

Genome Context

<gbrowseImage1> name=NC_008396:8959965..8963453 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8959965..8963453 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggcgctcattctcgtgggaggcttcggcactcgcctgcggccgctgactctcagcgtgccaaagccgctcgtcgatttcgggaacaagcccatgatcctgcatcagatcgaagctctgaaagaagttggagttacagaagttgttctggccatcaattaccagcccgaggtcatgcttaactttctcaaggacttcgagagcaagcttggtatcaagatcacctgctcgcaggagacagagccactcggaaccgccgggccgctggccctggcacgcgacaagctcgctgacggctccggcgaccctttcttcgtcctcaacagcgacgtgatcagcgagtacccattcgccgagctcatccagttccacaagtcccatggcggcgaggccacgatcatggtcaccaaggttgacgagccttccaagtacggcgtggtggtcatggaggatgagaccgacaaggtggagcgcttcgtggagaagcccaaggtgttcgtcggcaacaagatcaacgccggcatctacctgctcaacccgtcggtgctggaccgcatcgagctgaagcccacgtccatcgagaaggaggtgttcccgcgcatcgccgcggacaatggcctgttcgccatggtcctgcctgggttctggatggacatcgggcagccgagggactacatcaccgggctgaggctgtacctcgactcgcttaggaagaaggcgcccgccaagctcgcgtcgggcgcgcacgtcctgggcaacgtgctcgtccacgagaccgccgtcatcggcgagggttgcctgatcgggccggacgtcgccgttggccccgggtgcgtggtggaggccggggtgaggctgtcccggtgcacggtgatgcgcggcgcccgcgtcaagaagcacgcgtgcatctccagcagcatcatcgggtggcactccaccgtcggcatgtgggcgcgcgtcgagaacatgaccatcctcggcgaggacgtgcacgtctgcgacgaggtctacagcaacggcggcgtggtgctcccgcacaaggagatcaagtccagcatcctcaagcccgagattgtcatgtga</cdnaseq>

Protein Sequence

<aaseq>MKALILVGGFGTRLRPLTLSVPKPLVDFGNKPMILHQIEALKEV GVTEVVLAINYQPEVMLNFLKDFESKLGIKITCSQETEPLGTAGPLALARDKLADGSG DPFFVLNSDVISEYPFAELIQFHKSHGGEATIMVTKVDEPSKYGVVVMEDETDKVERF VEKPKVFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPRIAADNGLFAMVLPGFWM DIGQPRDYITGLRLYLDSLRKKAPAKLASGAHVLGNVLVHETAVIGEGCLIGPDVAVG PGCVVEAGVRLSRCTVMRGARVKKHACISSSIIGWHSTVGMWARVENMTILGEDVHVC DEVYSNGGVVLPHKEIKSSILKPEIVM</aaseq>

Gene Sequence

<dnaseqindica>2616..3287#2291..2530#2124..2186#1279..1389#gacgcggccgacgctgtcttcttcctcgtcatcaatcatcttcccccctctctctctctctctctttctctgacttcttctttctcaattcccgccaccccggcacgcccgctctcctctgctcggcgcaagttcttcggctgcctcaaggtgcgtacaccacgcccgagtctctgctctgttttttacttgctatgcatctctgttcgtagcttatcgatgtcgagtcaccatgacacctgttccgtgctcgtgccgttagagttagcaatgggaatatgggatgcgaatggcaattccgttggtagagatcgagaaaggcgagatctttcttgccgcggcgcgcgcaggcagcgcccacagacaagagctagcagagcggcagagaaggccagcacccagatctgcaatgggtggtagccccaccgctcattcctttctccttaatttcgctcccctccttcgttttttttttccctttttctcgtccttctctcgcgtgtcccggtcggagggtgggggcgtgccggcgcggcgcggcgtgggtgctcgatggccgcgaccactccgtcatctctatctcgtctctcctcatcatggatccagccatggagaagaaccccacaaaagtcatacaggagagatagatagagtcgtctcttcgtgctggctcgagatctattattggctagcaggttggtttttcggtgggaagcagagtggttcaatacaagcggacaacgacgcgttcatcggcaaggttaggtggatggatagattaggaggcgggccgccatatctctcctgacgcctgcaatttgccgtcttcctcgttacctacccgatcaagagagatcatcattccctctccatctcccctctttttccgcacggggtttggagagatcagccgatcaggtcgccgatccttatcccaatgccgtctttcagtccgatttctactgtatacgcacgcgtatcgcgttcttgctacctgtactttcagaattctgccgcttctgcagcggctgcagcggcgcagatgccatgacatgggtgctgtcctgggacacatcacacatggcatctgcgtactagacagggcggatgggtcttggagttcaggggcatgtcccgactcccgcactgtggcctccgtgatcacgcgggcattaagcgggttctggattagatcagatcagatcgtctcatcgttcttatgctgcttgctgcatttttcgcagggtgaggaggagctgagttagcagggctgcgaccatgaaggcgctcattctcgtgggaggcttcggcactcgcctgcggccgctgactctcagcgtgccaaagccgctcgtcgatttcgggaacaagcccatgatcctgcatcaggtcagcacaaatactccaatctttttatctcacaatacagtcttttcagttcgtcaggcatgacaatagagtagttatggagaacttatttggggaaatggtaatgcaagatgaaaaatgtcagtttgttccattacccgagttggggataagatgtagacagttgatgttattggcctcacactctagtcatgtctcttatgatggatcgatccatatgagttgattcctcacaacagtagcatctatttgcatcactgaatttgttcattctagtcataaatagttgtgacaaattgatattacatccgtcccaaaataagtgcagtcgtagggaaccgtgtccgacgtttgaccgttcgtcttatttgaaaaatttataaaaaaattgaaaaaaaatagtcacacataaagtattattcatgttttatcatctaataacaataaaaatattaatcttaaaatttttttaaataagatgaatggtcaaaagttgaacatgaacagtgcaaaactgcacttattttaggacggagggagtagtaaacaattagtactccattttcctatcgaagtgaactaatattcgaccttttccatgtcccaatcaaagatctgattcagactggtatttagtcgttcttttcagaagaaaaaggacttgttgctacttgcactgatacatcatttctcgatgcatctttggactgattttacaatgcactgctcaccagatcgaagctctgaaagaagttggagttacagaagttgttctggccatcaattaccagcccgaggtaaactgacatatcatggcacatggggcgctgttgaacatcgtgcttctgtcggttgctgagatcttactgatgcacactgttttactttgccaaaatcataggtcatgcttaactttctcaaggacttcgagagcaagcttggtatcaagatcacctgctcgcaggagacagagccactcggaaccgccgggccgctggccctggcacgcgacaagctcgctgacggctccggcgaccctttcttcgtcctcaacagcgacgtgatcagcgagtacccattcgccgagctcatccagttccacaagtcccatggcggcgaggccacgatcatggtcaccaaggtatcacgagacaccgaagaatctggcattcgtggaaaaagtgtcagaccatcagtgcactgagaaatgttgctgcttgatgcaggttgacgagccttccaagtacggcgtggtggtcatggaggatgagaccgacaaggtggagcgcttcgtggagaagcccaaggtgttcgtcggcaacaagatcaacgccggcatctacctgctcaacccgtcggtgctggaccgcatcgagctgaagcccacgtccatcgagaaggaggtgttcccgcgcatcgccgcggacaatggcctgttcgccatggtcctgcctgggttctggatggacatcgggcagccgagggactacatcaccgggctgaggctgtacctcgactcgcttaggaagaaggcgcccgccaagctcgcgtcgggcgcgcacgtcctgggcaacgtgctcgtccacgagaccgccgtcatcggcgagggttgcctgatcgggccggacgtcgccgttggccccgggtgcgtggtggaggccggggtgaggctgtcccggtgcacggtgatgcgcggcgcccgcgtcaagaagcacgcgtgcatctccagcagcatcatcgggtggcactccaccgtcggcatgtgggcgcgcgtcgagaacatgaccatcctcggcgaggacgtgcacgtctgcgacgaggtctacagcaacggcggcgtggtgctcccgcacaaggagatcaagtccagcatcctcaagcccgagattgtcatgtgacaaggcgaggcgaggcgaaggattaatctgcgcgtctttcgtttacatggtggtgacgatgctaagtgcgtcggaagaagggggccattatgtgcttgatatgtttgttgtttgatttgttcctgaactgtctctgaaactggaagtgtaacatgttgtcccaagtagtatgtgtcatcaggctatatggttgaatgagtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0268400, RefSeq:Os03g0268400