Os03g0269000

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Revision as of 12:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0269000| Description = Short chain alcohol dehydrogenase-like| Version = NM_001056211.1 GI:115452150 GeneID:4332376| Length = 2624 bp| Def...")
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Gene Name

Os03g0269000

Description

Short chain alcohol dehydrogenase-like

Version

NM_001056211.1 GI:115452150 GeneID:4332376

Length

2624 bp

Definition

Oryza sativa Japonica Group Os03g0269000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8995952..8998575

Sequence Coding Region

8996236..8996272,8996993..8997071,8997147..8997363,8998070..8998277,8998394..8998494

Expression

GEO Profiles:Os03g0269000

Genome Context

<gbrowseImage1> name=NC_008396:8995952..8998575 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8995952..8998575 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcggctgcggagacctcggcgaaggtgggggcgccgagaagatggtctcttcaagggaagacggcgctcgtcaccggcggcacccgcggaatcgggcgtgcggtggtggaggagctggcggcgctgggggccaccgtgcacacatgctcccggaaggaggaggagctgagcgagcgcctcaaggagtgggaggcccggggattccgcgtcaccacctccgtctgcgatctctcggttcgggaccagcgtgagcgcctcctccgccaagtcgctgacctcttcggcggcaagctcgatatcctcgtaaacaatgtggggacaaacataaggaagccaaccactgaattttctgccgaggaatactcttttatgatggcgactaatcttgaatctgcgtatcatctgtgccaactttcgcatcctcttctgaaagcatctgggtcagggagcattgttttcatatcatcagtctgtggattggtagctgtatttagtggttctctctatgctatgacaaaaggtgcaatcaaccaattaaccaagaacctagcatgcgaatgggcgagagacaacatacgatccaactctattgccccgtgcttttggcaaataaggactttgaaggtgctgtggtga</cdnaseq>

Protein Sequence

<aaseq>MAAAAETSAKVGAPRRWSLQGKTALVTGGTRGIGRAVVEELAAL GATVHTCSRKEEELSERLKEWEARGFRVTTSVCDLSVRDQRERLLRQVADLFGGKLDI LVNNVGTNIRKPTTEFSAEEYSFMMATNLESAYHLCQLSHPLLKASGSGSIVFISSVC GLVAVFSGSLYAMTKGAINQLTKNLACEWARDNIRSNSIAPCFWQIRTLKVLW</aaseq>

Gene Sequence

<dnaseqindica>2304..2340#1505..1583#1213..1429#299..506#82..182#gcgtcgtacatcgtcgtctgctgtgttgcgaaacagaagataaagcgaaagggaccaaaccgaccggcgggaggttcggagatggccgcggctgcggagacctcggcgaaggtgggggcgccgagaagatggtctcttcaagggaagacggcgctcgtcaccggcggcacccgcggaatcgggtactctccgctaactcttctctctctctctctctctctctctcttcagtagcaacaccgcgagcgtgcgagattccccgatggttgaggctgtgtgccatccgtgtgatgggcaggcgtgcggtggtggaggagctggcggcgctgggggccaccgtgcacacatgctcccggaaggaggaggagctgagcgagcgcctcaaggagtgggaggcccggggattccgcgtcaccacctccgtctgcgatctctcggttcgggaccagcgtgagcgcctcctccgccaagtcgctgacctcttcggcggcaagctcgatatcctcgtgagacgactaagtcactccccttctctcgtctctcctttattaccccttttatcgtttctatattgcaattgagttgcatgttcgcctcaaagttcgtccctaaaacccctcgtactattccccatccaaacaaagaatgctggtatagataactcaaagggcaaatagagctgaagataaaagagcccttcagaagtttagaaagatttttttttttttgcggggaagtatagaaagattttgacctgcttggttgcgcaatgtgatcttcataagagctgttttctcgcaatccgatctcaaatgtgcacacacaatatatgatggttgtaacttggttgtatttagagcccaacaaactggcctgttggagatagaacacatgttcgaatggccgaaaaattgtgttattacgcttctaaaatgcaatgtcagcaacaagggttaccgagtagaaatgcaaattttcagttttatatggtactaacgctccacatagttgaattaacatctttgattggtatgggattttacagactgatcgtgcaggttttgtttgcttgatttgcatgccatgtacatcttctcatagatgtgttttattgtgcctttcctttttataattttgatttgattacgctatctgatcattcaatatctgaacgttccttttgatttatcctgaattcatttggtcgtctaggtaaacaatgtggggacaaacataaggaagccaaccactgaattttctgccgaggaatactcttttatgatggcgactaatcttgaatctgcgtatcatctgtgccaactttcgcatcctcttctgaaagcatctgggtcagggagcattgttttcatatcatcagtctgtggattggtagctgtatttagtggttctctctatgctatgacaaaaggtaactgttttagctcaccagtgaatgtgcattcaatttcttgagcttttctaaacagttattggtattgtttaggtgcaatcaaccaattaaccaagaacctagcatgcgaatgggcgagagacaacatacgatccaactctattgccccgtggtatatcaggacttcacttaccgaaggagtaaagcttttgcttatcaaccatcctgatttatcatgtttggatacttgtcattttaagtcagaacatgtagtcaagtattcaactaattgtcaggatacggtattcaggctacatacaactgtacttgcatcaaggttgccatcttcttgtttctgaacctgactaagctatatttattttaccaatttgtctatacaaagtgtcaccagatttcacaagctttgggttggaaaaatgtccaaccgaaactagctcagcctcacttgtttttttttccacctttcttttctgtttgacttcagtttcatcttgaggctgatttaaaattaattatagccttcttaacctgctgatcaagtttttttcattcatgttcatttgtaattggatagcatagaagcacatcataaatatgattgtgcattttttactctatgcccatgattacctcaaaatgtgacagcgcacaccctacttctcttattccttagtcccaaatttgcctcttatactgttaatatattccacgatataaaaaggttgtagcacagctacaggtgtaagtgtcctgagtactgcacgctgaactcttcttttactccagcttatctatttatcctttgtttgcggggtgctagaaaatggaatgtctggtccctgaactcttgccctcttattgttttatgcagcttttggcaaataaggactttgaaggtgctgtggtgagccgaactccacttaggcgtgttggagaacctgaagaagtatcatcgctggttgcttttctttgcatgcctggttccagttacattactggccagacgatctcggttgatggaggtatgaccattaatggactctatccaagttaagattaatggactatcaagaagacggtatgttcctgctgtccagaaacggccatatatgttgttcttgggctttgcaagcagagcgaatattgtgtaaactgacatcaccatgaatatatatttcttgtgcgtttgaag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0269000, RefSeq:Os03g0269000