Os03g0269900

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Revision as of 12:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0269900| Description = Protein of unknown function DUF604 family protein| Version = NM_001056216.1 GI:115452160 GeneID:4332381| Length = 48...")
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Gene Name

Os03g0269900

Description

Protein of unknown function DUF604 family protein

Version

NM_001056216.1 GI:115452160 GeneID:4332381

Length

4835 bp

Definition

Oryza sativa Japonica Group Os03g0269900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9062292..9067126

Sequence Coding Region

9062411..9063304,9065962..9066549,9066646..9066747

Expression

GEO Profiles:Os03g0269900

Genome Context

<gbrowseImage1> name=NC_008396:9062292..9067126 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9062292..9067126 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcacaaatggaaggtcgtggagggcggcgccggtgccggtgccggcggcggcgggggagatcagcgccggcggtgcgtgacggcgtcgttgtccatgctgatcgcggccaccctggcgtttcttgcctacgtcgccttcttcccgtatgacggcgcgggcgggctgtaccggtggtggagatgcgagggttgcggcgacgcggcgggcgggttcgccttcgacgaggcggccatggcgcaaggacctacggctggtggcgcccgccgccgctcgccgacgacgctgtcgcacatcgtgttcggcgtcggcgcctcggcgcggacgtgggacaagcggcgcgggtacgcggagctgtggtggcgccccggggagatgcgcggccacgtctggctcgacgagcagccggtggggccctggccggcggcgacgtgcccgccgtaccgcgtctcggcggacgcgtcccggttcggggaccgggcgtcggcgtcccggatggccaggatcgtggcggactcgttcttagccgtcacggcggagatggcgaacggcaccaccgattctcccgaggcgcggtggtttgtgatgggtgacgacgacacggtgttcttcccggacaacctggtggccgtgctgaacaagtacgaccacgaggagatgtactacgtcggggcgccgtcggagagcgtggagcaggacgtgatgcactcgtacggcatggcgttcggcggcggcgggttcgccgtcagctacccggccgccgccgagctcgccaaggccatcgacggttgcctcgaacgatacaggctgttctacggcagcgatcagcgcgtgcaagcctgcctcagcgagctcggcgtccctctcacccgcgagcccggattccaccaggtggacgtccgcggcgacgcgtacgggatgctggccgcccacccgctggcgccgctggtgtcgctccaccacctcgaccacatcgagcccatcagccccggggggcagcatggcagcccgctggacgcggcgcggcggctggtgcgcgcgtcgcggctcgaccaggcgcggtcgctgcagcaggcgttctgctaccagcgcgggccgcgctacacctggtccgtgtcggtgtcgtggggttacacggtgcagctgtacccgtgggccgtggcgcctcacgagctggaggtgccgctccggacgttcaagacgtggcggtcgtgggccgatggcccgttcgtcttcaacacgcggccgctgagccgcgacgacgcgtgcgcccagcgggccgtcttcttcctcagcgccgcccggaacgatacgtcctcccgcggccgcggccgcagccgagccaccatgacggagtacaccaggcgcgttgcgaagccgggggccaaggaatgtgaccggcccagcttcctcgcggcgtccacggtccacacggtcagggtcttcgccccaaagatgagcccaaacgagtggacacgggccccacggcggcattgctgcagcacgaagaggacgaggtttggcactgagctggaggtgcggatacgatactgcggccgaggagagctcaccacgccgtag</cdnaseq>

Protein Sequence

<aaseq>MQHKWKVVEGGAGAGAGGGGGDQRRRCVTASLSMLIAATLAFLA YVAFFPYDGAGGLYRWWRCEGCGDAAGGFAFDEAAMAQGPTAGGARRRSPTTLSHIVF GVGASARTWDKRRGYAELWWRPGEMRGHVWLDEQPVGPWPAATCPPYRVSADASRFGD RASASRMARIVADSFLAVTAEMANGTTDSPEARWFVMGDDDTVFFPDNLVAVLNKYDH EEMYYVGAPSESVEQDVMHSYGMAFGGGGFAVSYPAAAELAKAIDGCLERYRLFYGSD QRVQACLSELGVPLTREPGFHQVDVRGDAYGMLAAHPLAPLVSLHHLDHIEPISPGGQ HGSPLDAARRLVRASRLDQARSLQQAFCYQRGPRYTWSVSVSWGYTVQLYPWAVAPHE LEVPLRTFKTWRSWADGPFVFNTRPLSRDDACAQRAVFFLSAARNDTSSRGRGRSRAT MTEYTRRVAKPGAKECDRPSFLAASTVHTVRVFAPKMSPNEWTRAPRRHCCSTKRTRF GTELEVRIRYCGRGELTTP</aaseq>

Gene Sequence

<dnaseqindica>120..1013#3671..4258#4355..4456#aggcaccaccatctcgcatcatttgttttttctccctggaaagagcggccatctcgccctgcgttgcgagatccccgtgaaccgtcgcggccgggcggtggtaatcgtggcaaggacggatgcagcacaaatggaaggtcgtggagggcggcgccggtgccggtgccggcggcggcgggggagatcagcgccggcggtgcgtgacggcgtcgttgtccatgctgatcgcggccaccctggcgtttcttgcctacgtcgccttcttcccgtatgacggcgcgggcgggctgtaccggtggtggagatgcgagggttgcggcgacgcggcgggcgggttcgccttcgacgaggcggccatggcgcaaggacctacggctggtggcgcccgccgccgctcgccgacgacgctgtcgcacatcgtgttcggcgtcggcgcctcggcgcggacgtgggacaagcggcgcgggtacgcggagctgtggtggcgccccggggagatgcgcggccacgtctggctcgacgagcagccggtggggccctggccggcggcgacgtgcccgccgtaccgcgtctcggcggacgcgtcccggttcggggaccgggcgtcggcgtcccggatggccaggatcgtggcggactcgttcttagccgtcacggcggagatggcgaacggcaccaccgattctcccgaggcgcggtggtttgtgatgggtgacgacgacacggtgttcttcccggacaacctggtggccgtgctgaacaagtacgaccacgaggagatgtactacgtcggggcgccgtcggagagcgtggagcaggacgtgatgcactcgtacggcatggcgttcggcggcggcgggttcgccgtcagctacccggccgccgccgagctcgccaaggccatcgacggttgcctcgaacgatacaggctgttctacggcagcgatcagcgcgtgcaagcctgcctcagcgagctcggcgtccctctcacccgcgagcccggattccaccaggtgaatatccatccgcactccaattattttttccattttactaccaaacattactctgatcctaacacagccctaacaatcctcgaaaatgtttcctttaatcgtccaacctcccaggaatcgggaaaaggtaattccaaattatatcatgttcttatttccatgcaaactttagcttagctgatcacagtgcggttgcaattggcaattactcccagaccgatttctcggcaacaactgccaaaatcaaaaacttttttgcagttgcaattgtcaattactcccagaccatttctctagccaaaaataaaaactttttgactaacttttcaccgcttctccaagcaaaatcctccacacagaagaggcgaaatagaaaggtctgtatccaatcgtgatcgttaggattttcacactttagaatctttggctcctgcactttctagaaattactactcaacacccctgctggctgtaggcaaatgcacaatgccatccgcgggatgcccttgttccggctaaagttgccggacagcgtggaggcacacggaccaaaaggcctagctcgtcctgggagcgacaccgctctctgcccccatgtgatcgcgggtatctcgcaggacaagcgtctacatgccacagggggactgaccctagctaacaaccgtggtgcccgcccgtcgctttccatttttccgggcaccaccacccccatcggcacatccactcattcccctttcatccaccccgacatacacggcggcgtgaaaaacaaatgaggagatcaggcgacgaggcggacatcgccctgagtttagtagatatccgccatgccggttggtagcggtagagccatatcatatttgttacgtactgcagggtggatggtcccgggggtctagttatgttagtttggattgcagcgccaaaaataatcccgtggggcggagtggcgatctcgcctttgggccgtaggtatcgccgtttttttcgctgcttgccctatttcgttgtcgtgggcgtatgcactactgctatgtggcgtggctgcacgattagtggctggaagccaaagcttaagcttggttaatgaggcattgatgactgacgttgatggttgtagtattgtaaagaaaaaaataacatcggtcgcgcccggggcggtggaccagtgatatactatagcttttccggtgagtcgccaacacggcagttggttggcgcgacgtcgtgaccccgcggcgccaggtgcctcgctgtccttttcccggtgacgaagcggcccagcctaggtgtcacgagatgtggagattagcgctgtagtttaggtgtggcagcggcctacggaaacgatttcaagttttggaacgggtgagggtcattagagcacccgcaatggtaaagtaacgtgctctctataaaacattacaactcagcaatatactagattaatagtaaactacctcaatagtatgtctatatggatatctatagctctttaatccattgcctcgtttttctgtatagactatctacaggttagtagatagctttgctctctcttcatttaatctctttcaagtaggaaaatatgctgatatggatatcttgtagagagcctataaataaccattgcgggtgcccttacattaccgttggtaaccgcgtggttatcagacttatcacggggtacggtaatagaaaaatcacgataatctccttaaatttaaataaattttaaaaaatatttttttataaattttgtaagtacggtttttcacgattattgtacggtaactgtgcttaccgtcaggatgctgtaacctcggttccggcggtttggaaaccatggtgagggttactacttcttgttcctggtcgccgcagtagtaacggacctagagatagtggtagcggacgcatacaaatgtagtagtggaaaactcactggaatatatctccatctctcgttctctcgttggaattgagcaggggcagtggcagtactacggctcaactttcgtgggtagttctaccgtgcttgacatgccgtgcggtcagcgagggaaagaaaccttttccctcacgtcgaaccggccgcttttcttttcaccttttttgaacccatgcctcttggggacacatgtccaccaaccagatctgagaattctttgcttttgggctagtttagttcccaaaaattttccccttcacctatcacatcgaatctttggacacatgcatggagcattaaatgtggacaaaaagaaaaaccaattgcacagtttagctataaatcgcgagacgaatcttttgagcctaattagaccatgattagccataagtgctacagtaacccacatgtgctaatgacggcttaagtagactcaaaagattcgtctcgcggtttccaggcgagttctgaaattagttttttcattcgtgtccaaaaaccccttccgacatccggtcaaacgtctgatgtgacacccaaaaaatttcttttccccaactaaacacagcctttgtggcgtgtcgtaacaaggtcgccatttgtcactttctgccctctgtcttcttgtcgtcctcaccatcgttcaccatctggcatcgagaatcttcttactaacaactgtggccgcaacaacgactgacaggtggacgtccgcggcgacgcgtacgggatgctggccgcccacccgctggcgccgctggtgtcgctccaccacctcgaccacatcgagcccatcagccccggggggcagcatggcagcccgctggacgcggcgcggcggctggtgcgcgcgtcgcggctcgaccaggcgcggtcgctgcagcaggcgttctgctaccagcgcgggccgcgctacacctggtccgtgtcggtgtcgtggggttacacggtgcagctgtacccgtgggccgtggcgcctcacgagctggaggtgccgctccggacgttcaagacgtggcggtcgtgggccgatggcccgttcgtcttcaacacgcggccgctgagccgcgacgacgcgtgcgcccagcgggccgtcttcttcctcagcgccgcccggaacgatacgtcctcccgcggccgcggccgcagccgagccaccatgacggagtacaccaggcgcgttgcgaagccgggggccaaggaatgtgaccggcccagcttcctcgcggcgtccacggtccacacggtcagggtcttcgccccaaagatgagcccaaacgagtggacacgggtaagaacaactggctaaactgctgttctgatgaattcctgatgcattctggctctcccatgggcatgcttatgtgcgttttatctgttgttgcaggccccacggcggcattgctgcagcacgaagaggacgaggtttggcactgagctggaggtgcggatacgatactgcggccgaggagagctcaccacgccgtagctctctgccgatgatcccgccgcagttttgccaacagcacggagggctagatgccaagattttagtagcggctagtgccatgacaccgaactgactgaagaggacggcagggtgaaacaccgtatttcactgcggatttttggacagattctggtttgtcttcgttgtgcacgtacaagtgattatacggctcgtcaggccgcagacacatgctgacatgcatacgcatgattgcataccccgggtacacagtaatccgtttggctcgagcgctctttttctgtaaagagctgtaaagggagtggtgatcagacttaacgatttcgacatgtaaagcgtagtaggactagtttgaaaggatggtcttttcactgttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0269900, RefSeq:Os03g0269900