Os03g0271200

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Revision as of 12:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0271200| Description = Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein)| Version = NM_001...")
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Gene Name

Os03g0271200

Description

Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein)

Version

NM_001056224.1 GI:115452176 GeneID:4332389

Length

5560 bp

Definition

Oryza sativa Japonica Group Os03g0271200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9119055..9124614

Sequence Coding Region

9119163..9120347,9120768..9120989,9121105..9121212,9122165..9122359,9122462..9122710
,9123082..9123336,9123868..9124107

Expression

GEO Profiles:Os03g0271200

Genome Context

<gbrowseImage1> name=NC_008396:9119055..9124614 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9119055..9124614 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcacctcccagagcctcttcttctccccgctggccgccggcccatcccggagagtccgggggcggggccgctccacctccgtgtcagccgccgcctccgcctcgtcgcacaactcgcagccccacggccacccccaacaacccctcgccgtcgcgtcgtccagctccaaatccgaatctaagggctcgaaaaccttcgccctcgcctccgccatcactgccgccgcctctggtgcattccttctcgcgtcatctggtggcgggttcgggggcggcgccgggggtcctctcggcggtggaggcggtggatggggcgccggaggaggaggaggtggtggtggtggtggcggcggcggcgggttctggtcgcggatcttctccggcggcgcggcgcacgcggatgagaagtcgtcgggggattgggacccgcacgggctcccggcaaacatcaacgtgccgatgacgaagctgagcgggctgaagaggtacaagatctccgagctcaagttcttcgaccgcgccgcgggagggggaggcgcgttcacggggcccgaggattccttcttcgagatggtgacgctgcagcccggcggcgtgtacaccaagtcgcagcttctgaaggagctcgagacgctcgtgtcctgtggcatgttcgagagggtcgacctcgaggggaaggccaagcccgatggcacccttggcctcaccgtgtcttttgtcgagagcgtgtggagcgctgctaagcagttcaagtgcatcaatgtggggctaatgtcgcagtcgggccaggttgacttcgaccaggacatgacagagagggagaagatggattacctccggaagcaggagcgtgattaccagcagcgtgttcgtggtgccaagccgtgcatattgccagataacgtgcgtggggaggtgctaggaatgatgaagaagcaggagaaggtgagcgctaggctcctgcagaggatcagggaccatgtccagaaatggtaccacaatgaggggttcgtctgcgcccaggtggtgaactttggaaacctaaacaccagtgaggttgtttgcgaggtggtcgagggggatataaccaaagtggagtaccagttccaggataagcttggaaattttgttgaggggaatacccaaattcctatcatagacagggagctcccacagcagcttcgacctggccatatctttaacattggagcagggaagcaagctctgaagaatataaattcacttgctttattctccaatatagaggtgaatccacgccctgatgaaacaaaagaagggggcattgtggttgaaatcaagcttaaagaattagaaccgaagtcagctgaagtaagtacagagtggagcatcgtacctggacgtgaaggccgaccaactctggcatccattcaacctggaggaactgtgtcatttgagcaccggaacatctatggtctaaacagatccattgttggttctgttacatccagcaacctgctcaaccctcaggatgatctctcattcaagcttgagtatgttcatccttatctggatggtgtggatgaccgtaataaaaaccgcaccttcaaaactagctgcttcaataccaggaaattgagtcctgtctttgttgctggccccaatatggatgaagctccacctgtttgggttgacagagttggattcaaagccaacataacagagagcttcacacgtcagagcaaattcacatatggccttgtggtagaggagattacaacgcgtgatgaaaccaacagcatctgcactcatggttctcgagcaatgcctagtggtggcctgagtatggatggacctcccacaaccctcagtggtactggcatagatcggatggcttttctgcaagcaaatataactagagacaatacagaatttgtaaatggtgcagttattggcgacagatgtattttccagttggatcaaggtcttggcattggaagcaaaaacccattcttcaaccgtcaccaacttactttgacaaagtttgttaatttaaacaagcaggagaaaggtgctggcaagccacttccagctgttttggttcttcatggtcattatgcaggttgtgtaggagatctgccaagctatgatgcatttacacttggaggaccttactcagttaggggctatggtatgggtgaactgggtgcttccaggaatgttcttgaggttgcgagtgagttgcgtattcctgtgaggaacacatatgtgtatggatttgttgaacatggcactgaccttggcagttccaaggatgtgaaagggaaccccacagagttcttccgacgggttggtcatgggtcatcatatggtcttggcgtcaagcttggcttggtaaggggagagtacatcgtagatcacaatgctggtactggaacagttttcttcagatttggcgagagattttga</cdnaseq>

Protein Sequence

<aaseq>MALTSQSLFFSPLAAGPSRRVRGRGRSTSVSAAASASSHNSQPH GHPQQPLAVASSSSKSESKGSKTFALASAITAAASGAFLLASSGGGFGGGAGGPLGGG GGGWGAGGGGGGGGGGGGGGFWSRIFSGGAAHADEKSSGDWDPHGLPANINVPMTKLS GLKRYKISELKFFDRAAGGGGAFTGPEDSFFEMVTLQPGGVYTKSQLLKELETLVSCG MFERVDLEGKAKPDGTLGLTVSFVESVWSAAKQFKCINVGLMSQSGQVDFDQDMTERE KMDYLRKQERDYQQRVRGAKPCILPDNVRGEVLGMMKKQEKVSARLLQRIRDHVQKWY HNEGFVCAQVVNFGNLNTSEVVCEVVEGDITKVEYQFQDKLGNFVEGNTQIPIIDREL PQQLRPGHIFNIGAGKQALKNINSLALFSNIEVNPRPDETKEGGIVVEIKLKELEPKS AEVSTEWSIVPGREGRPTLASIQPGGTVSFEHRNIYGLNRSIVGSVTSSNLLNPQDDL SFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRKLSPVFVAGPNMDEAPPVWVDRVGFKA NITESFTRQSKFTYGLVVEEITTRDETNSICTHGSRAMPSGGLSMDGPPTTLSGTGID RMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNK QEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVA SELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVKLGLVRGEY IVDHNAGTGTVFFRFGERF</aaseq>

Gene Sequence

<dnaseqindica>109..1293#1714..1935#2051..2158#3111..3305#3408..3656#4028..4282#4814..5053#agggctagacgagaaaagcccccccatccgcctcctcctcctcccccaaattcctctgcttcccccggcggcaagaccgaagcctcgccaccatccgcggcggccgcaatggcgctcacctcccagagcctcttcttctccccgctggccgccggcccatcccggagagtccgggggcggggccgctccacctccgtgtcagccgccgcctccgcctcgtcgcacaactcgcagccccacggccacccccaacaacccctcgccgtcgcgtcgtccagctccaaatccgaatctaagggctcgaaaaccttcgccctcgcctccgccatcactgccgccgcctctggtgcattccttctcgcgtcatctggtggcgggttcgggggcggcgccgggggtcctctcggcggtggaggcggtggatggggcgccggaggaggaggaggtggtggtggtggtggcggcggcggcgggttctggtcgcggatcttctccggcggcgcggcgcacgcggatgagaagtcgtcgggggattgggacccgcacgggctcccggcaaacatcaacgtgccgatgacgaagctgagcgggctgaagaggtacaagatctccgagctcaagttcttcgaccgcgccgcgggagggggaggcgcgttcacggggcccgaggattccttcttcgagatggtgacgctgcagcccggcggcgtgtacaccaagtcgcagcttctgaaggagctcgagacgctcgtgtcctgtggcatgttcgagagggtcgacctcgaggggaaggccaagcccgatggcacccttggcctcaccgtgtcttttgtcgagagcgtgtggagcgctgctaagcagttcaagtgcatcaatgtggggctaatgtcgcagtcgggccaggttgacttcgaccaggacatgacagagagggagaagatggattacctccggaagcaggagcgtgattaccagcagcgtgttcgtggtgccaagccgtgcatattgccagataacgtgcgtggggaggtgctaggaatgatgaagaagcaggagaaggtgagcgctaggctcctgcagaggatcagggaccatgtccagaaatggtaccacaatgaggggttcgtctgcgcccaggtggtgaactttggaaacctaaacaccagtgaggttgtttgcgaggtggtcgagggggatataaccaaagtggagtaccagttccaggataagcttggaaattttgttgaggggaatacccaaattcctatcatagacagggagctcccacagcaggtataccaaataccgctagctgctatagttaatacgagaatataattttgttcccatctttgaattttcttagtgattcatataactagatcatgtgtttaggaaggtataagcgataatttgaataccctgccacatagtgattactttggattctggttgtagcacggaattcttttagtgccactatacaattttatcgccatgttgattctagaaaagcagtagcatgtacccctttcatgacatgtgggatgattttgtgccatgaaaaagcctgaagttaaacgtttactacatacttcttgccactgttagtgattagttgcagatatgtgggtcttgaagaaaaaagtatatttcttattctgaatgtgatatattagtgttttcagtaacttgtacctctgtatcctgcagcttcgacctggccatatctttaacattggagcagggaagcaagctctgaagaatataaattcacttgctttattctccaatatagaggtgaatccacgccctgatgaaacaaaagaagggggcattgtggttgaaatcaagcttaaagaattagaaccgaagtcagctgaagtaagtacagagtggagcatcgtacctggacgtgaaggccgaccaactctggtaatttacctactgtggagccaacattttattcttctctaatctttattttaacaacaccgttccaatccatccctaccaacacgtatgacgtatctgatggcaattattttaggcatccattcaacctggaggaactgtgtcatttgagcaccggaacatctatggtctaaacagatccattgttggttctgttacatccagcaacctgctcaaccctcaggtcagttcgtgattaatgttctcttcacttggttatctttttttttctttttgttactgttagataaacataatttttgtaggtttagacaagtgttatggtgttatcagttgtaagagggacaatattggttcgtgctggtttgattacttcatatgaaaacttgaatgtctacttttgaaaccgtctacataacctcctcaaataactgtttttaattgacaaccatgtcttgcatcaaatgttgaacttggaaattttctgttctaatcaaccttcatgtaactgtggtcattaattgctacttctccgttccaaaatataacttcctagagttaattttgtcccaaatatagatgctacctagtacttgtaaagggtgagtttttccactaaaataccccttctacccattctacccctttgctttattatagcctcaacctaacctatagctgacccatcccaagaaggcaaccaagtctttttacccctctccttcatacccgtgctgaaggctatattttgggatggtgggagtaccttactacaaccccttccacattataagacattttcggtttgcttaagtcaaactttttcaagtttgaccaagtgtatagaaaaaaaaaacatagcaacatctacaacaccaaattatagtttcattaaatccaccattcaatatatttgcatagtatatttgacttgtgttgaaaatcttgctacacttctttacaaactcgatcaaatttaggacaaacccgaaacgtcttatagtatggaacagagggagtactgtatgtttgtgagcatcattttgaaacattgacttgtttcattcctggtgattattctatgtgtattttagatgatctagcaatctagtgtatgccttatagtacttatgatttctgatattccatatgtgtatgcctttttgggttttcaggatgatctctcattcaagcttgagtatgttcatccttatctggatggtgtggatgaccgtaataaaaaccgcaccttcaaaactagctgcttcaataccaggaaattgagtcctgtctttgttgctggccccaatatggatgaagctccacctgtttgggttgacagagttggattcaaagccaacataacagaggtttgcacagatttatatgatcttttgcatcttttattatgcattagctgccttctccaataatcatctataataacatgaggaaactgctcttggtttcagagcttcacacgtcagagcaaattcacatatggccttgtggtagaggagattacaacgcgtgatgaaaccaacagcatctgcactcatggttctcgagcaatgcctagtggtggcctgagtatggatggacctcccacaaccctcagtggtactggcatagatcggatggcttttctgcaagcaaatataactagagacaatacagaatttgtaaatggtgcagttattggcgacagatgtattttccaggtatgctctgtgcccttgtgattccaggaatacatactaaaccttcagttattggcaagtagttaggaataatattcagtcatacacttagttgtgtggaattttggaaaagatcaactaccgaggcagacctttggtactattgatatgtcagtttgatactttcatacattgcataaaatgagggttcaatgttcggaaaatattcagacacagtttagtgacaacttgtgatattaacccttttggtcatagaattcaactatttctgccaatatttcaattgctttgtaaatcgtttctgtatgtttgtgcaaattagtgtttaatgtaaatcctttgatatgttttttttttttggctggctgcagttggatcaaggtcttggcattggaagcaaaaacccattcttcaaccgtcaccaacttactttgacaaagtttgttaatttaaacaagcaggagaaaggtgctggcaagccacttccagctgttttggttcttcatggtcattatgcaggttgtgtaggagatctgccaagctatgatgcatttacacttggaggaccttactcagttaggggctatggtatgggtgaactgggtgcttccaggaatgttcttgaggtgagtgttattagggaatttgcaatatattatgatacccctactttccttcttagttagaagagtaaacttcataaaactatagatactttgacaaaaccatcacaaaactacagatttaacacagaatttctcatagaattatagatttaacacaatttcttatagaactacagatttaagatggagtgtcaaaaaataaatattaagtagcaaatatttcacaaaactacaggtttagtgtcaatttaatcacaaaactacaacgtttacagctctaagataacggtagtgctagggattcaaactctagaatctatagttttgtgataacttcaatattaaatctgtagttttgtgataaatttgttgctaaatttgtagttttgtgatacaatgtcttaaatttactctattttagaattataaaacaaagaactactagatataattgatgccagtaccatggctacttgcaacatatagtgatccttgctttgttggtgacttatgtatcttttaatcctgcaggttgcgagtgagttgcgtattcctgtgaggaacacatatgtgtatggatttgttgaacatggcactgaccttggcagttccaaggatgtgaaagggaaccccacagagttcttccgacgggttggtcatgggtcatcatatggtcttggcgtcaagcttggcttggtaaggggagagtacatcgtagatcacaatgctggtactggaacagttttcttcagatttggcgagagattttgaaaacagttcagtcaaccaccagtggataatagatcattgaggtgggctgtttagctcatttgcaggcatagaatcctgaagcacctatgcatgttgtgtgaaccgttgatgtttctggattcaacttgaataggaacttctgttcccgctgaaataatgaagcaatgttgcttccatccaaagtgagaagttagctttcaggattagtattgtgtaggaagcaagatttgatcgcagtctggtgcttctttgacagaagtacttgctcctgtcattttcagtgctagagtttttttgttttgttcttttgctttggttagataaagtgttctagcagttttgtcccatattcgggctataaattttagttgaactatggtaagttggtaactactcctatctgttgctgcattttgtcggctcagagcttcacctgtttatctgaatcttttggcaccgctgaattcaaaccttggacctatcatactggtgtcaagcgtttcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0271200, RefSeq:Os03g0271200