Os03g0272300

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Revision as of 12:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0272300| Description = Zinc finger, RING-type domain containing protein| Version = NM_001056231.1 GI:115452190 GeneID:4332396| Length = 358...")
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Gene Name

Os03g0272300

Description

Zinc finger, RING-type domain containing protein

Version

NM_001056231.1 GI:115452190 GeneID:4332396

Length

3582 bp

Definition

Oryza sativa Japonica Group Os03g0272300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9183459..9187040

Sequence Coding Region

9184249..9184296,9184389..9184617,9184706..9184841,9185005..9185053,9185680..9185805
,9186560..9186673

Expression

GEO Profiles:Os03g0272300

Genome Context

<gbrowseImage1> name=NC_008396:9183459..9187040 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9183459..9187040 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgttcatggtactgaactcacaccagatgtctccgaactttttggtttggctggttttgggtgtgttcctaatggccaccagcctaaggatgtacgccacatgccagcagctccaagcgcaggcgcaagctcacgctgcagctgccaacggcttccttggacacactgagctgcgggtgcatgtcccgccgaccatagctctcgccacacgaggccgtttgcagagccttaggctccaacttgcgctacttgaccgcgagttcgatgatttagattatgatgcccttagggccttggatgcagacaatagccctcatgctccttcgatgagtgaagaagaaataaatgctcttcctgtattcaaatacaaggttcaggcacatcagggaagtgcctctttccgaaaaagtgatggaccatctcaaccatctgtttcttctactgaatctggcaatgagaaaaagcaggatcgtttcaaggctgatgcaactgacaacaccctggaggatgagttgacatgcagtgtttgcttagaacaagtcgttgtgggtgatctattgagaagcctaccatgcctgcaccagtttcatgcaaactgcatcgatccatggttgcgccaacagggaacatgcccagtttgcaagcaccgtgtaagcgatgggtggcatggtgaagcagatgcttctaacatggtataa</cdnaseq>

Protein Sequence

<aaseq>MLFMVLNSHQMSPNFLVWLVLGVFLMATSLRMYATCQQLQAQAQ AHAAAANGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDREFDDLDYDALRALDA DNSPHAPSMSEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSSTESGNEKKQDRF KADATDNTLEDELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKHR VSDGWHGEADASNMV</aaseq>

Gene Sequence

<dnaseqindica>791..838#931..1159#1248..1383#1547..1595#2222..2347#3102..3215#actgctcgctctcgttttccccatccgcaccggctgctcctcgtcgcgccgacgcctccgcgcgccagcgaatcgccgcctcgagaggcccctcgtcgccgatcaggtgagtgcccctcctcgagagtcacgctcgttactcgattccgcggctgtttcaagatcaggcaggccctagaatctgggcgaaggttctcttgacttctggtagccttcgggggtttatctgggcgtttcccgcgttgaggcgtcatggacatgggagccgtgggggattttctaggtagggttttggttggggcgtcgctttcctcatattttgtcggtggctttgctgggcttcaggggcgtggcctcgtcgagtttttttgttcctcggaggggcggcaaggaggcggatttggagcaattcgtaagactagtggtggtggtggtggtggtggctggttggcgccatgagcttcgtgttccgggggagcagaggtgacatcgaggccggaggcttcccggggttcgccccggagcgccgcgccatggtgagcgtttctgcttaaatgtaggttttggcatcctaaagtagatctttttttgttatgaatttctgactcccatctgtgtgggggggcttgtatgcagcggattcatgcgggtggtcggccggtgaacagcaacctggcttttcttgtcactggtaatgtgggcatgccctttgtactaccgatattattaagctgtaaaaaatatcgattttctagttaatgcgatctattattctttttgggcagttcttatgttgttcatggtactgaactcacaccagatgtctccgaactttttggtaagttatcaattgatggtatgtattatgcttatatagcttgatggagaaatttcatgatttgtcgggttgcgcggaattgtctcttgtaggtttggctggttttgggtgtgttcctaatggccaccagcctaaggatgtacgccacatgccagcagctccaagcgcaggcgcaagctcacgctgcagctgccaacggcttccttggacacactgagctgcgggtgcatgtcccgccgaccatagctctcgccacacgaggccgtttgcagagccttaggctccaacttgcgctacttgaccgcgagttcgatgatttaggtgatacactttattcacttaggttaattcatatactgcttcttactctcctgcaagcattacattgtagctgatgttttgcttgcagattatgatgcccttagggccttggatgcagacaatagccctcatgctccttcgatgagtgaagaagaaataaatgctcttcctgtattcaaatacaaggttcaggcacatcagggaagtgcctctttccgaaaaaggtaagatgtattatccttttggctacattttttagctggcatagcaaacgcatgataagtctacaactgccttccatctctgataagtaaccaaccatataattccgaatttgtctactttgtatgggatgtaactaaccatttaattcttttgattctatagtgatggaccatctcaaccatctgtttcttctactgaatctggcaatgaggtaataaataaatactgacatgattatgaagaggttattctttgaatggcatctactgttattgtttgcataggcatgttgacatcctggcatgactaagataggagcatagaatgtgccatctatgtgttctttagcttgtattgatggaaatcattgagcgttactccctccgtcaacaaatataaaggattctaggtggtttagcagaatttaaggtcgaggtgaaattacttcgatgctgctagcagttttcttgattgggaaatatcacgcctagcggtgcaaccatcagtgagcaataaatacagtggttggatggatttggatagtagtactacaaaatctcttatatttgtggacatattttgaaccccaaaatccattatatttgtggaaagagtacttggttactttgcggttatttcatattgtggtggtatttcttagaattaaaatgcttttttgatgttcactatagtcaaccgtggtagctccataacaatcacaaagttgatgcttacacttttatttgtctattactcagcatgcctagaattacaatcagctgtgctgtttggtctggattatccttgttctagtgacttgttttttttgctgtgtagaaaaagcaggatcgtttcaaggctgatgcaactgacaacaccctggaggatgagttgacatgcagtgtttgcttagaacaagtcgttgtgggtgatctattgagaagcctaccatgcctgcaccaggtaatcattatactagaattatcttttttttagacatgtatactagaatcatcttgagcttgttttctttgtatgacagcaatagcaggctttatttcctagttatatctgctgtgctatgatcatggtgcctgttagcgtgttatatagtaactgtcctgacattttgttaaccaaatcccaaaacatgctaggaaaccactatatttgatgccatttgcaatttatgtgtgtttagtgaaaaagcaaagggaaaacttttgcatcatttcctatagctatcgtgtttcggaaaggaattgtttctttttccagtatgctaaatgctaagtatcttactctctcctgtttctgtaaggtgtggttcgagtgtttgactgtgatggtctttgatgttgaaccttggccactacacaaaatacgtgatctgtgcttggtttggctgcttaatcttgtattcaaatttgtaccggtctgagttccaaatatgtcatatatgctcacaatttttagtaaaatttaaatttgaatgaccatagccacatcaatgacaactatatactgtgttttgttatgttcgagttttcatagtgatacgatttatcctatatgagtgaaactatcatacactggctttttgctgttgtctttcaagtttttagctttccatcgaaggattgacattggtgctattagttttttgtgtcatgaggtgggactgcaaggtttacttactttcccacttgttttgcagtttcatgcaaactgcatcgatccatggttgcgccaacagggaacatgcccagtttgcaagcaccgtgtaagcgatgggtggcatggtgaagcagatgcttctaacatggtataagctgctgggagtggccagcaggtcttaagctaaaactactgacttaacccacggaatgaggattagctgtttagtcttgaggagtgtttttgtacataaaaaaacgttcacttctctgtgatgtttatgcatcaaaaggttgtgatatttttggttgacctgtaccctgttcagtatgaactcacatacaatcctttttactctgtttccgtggggaaattggcgtattatgggtgtttaaggctgaagatcagtagaggatttaagatccaagagtagtggtctggtctctattagtcttaagtaaaaatgatcttaactgttagtattatcacaagtaaaaaggagaaactgatttatgagttct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0272300, RefSeq:Os03g0272300