Os03g0273200

From RiceWiki
Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0273200| Description = Similar to Laccase (EC 1.10.3.2)| Version = NM_001056234.1 GI:115452196 GeneID:4332400| Length = 2708 bp| Definitio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0273200

Description

Similar to Laccase (EC 1.10.3.2)

Version

NM_001056234.1 GI:115452196 GeneID:4332400

Length

2708 bp

Definition

Oryza sativa Japonica Group Os03g0273200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9218282..9220989

Sequence Coding Region

9218664..9218794,9218884..9219852,9219936..9220064,9220180..9220424,9220543..9220694
,9220793..9220903

Expression

GEO Profiles:Os03g0273200

Genome Context

<gbrowseImage1> name=NC_008396:9218282..9220989 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9218282..9220989 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagcacgctgcctcgcattgcttctcctctatggcacgttgctgctgctgttgctgctgccacagctgccgctcgccggcgcggcgacgagatactacaccttcaatgtgaagcttcagaatgtgacacggctgtgcaacacccgggcaatcccgacggtgaacggcaagttccccgggccgaaaatagtcaccagggagggagaccgcgtcgtcgtcaaggtggtcaacaatatcaaggacaacattaccatccactggcacggggtgaggcagatgcggacggggtggtcggacgggccggcgtacgtgacgcagtgcccgatccagacggggcagagctacgtgtacaacttcaccatcaacgggcagaggggcaccctgttctggcacgcgcacgtctcctggctgcgatccacgctgtacggccccatcatcatcctccccaaggccggcctcccgttgcccttcaccgagccgcacaaggacgtgcccatcatcttcggagagtggtttaacgcggaccctgaggcgatcgtcgcgcaggcgcttcagaccggcggtgggcccaacgtctccgacgcctacaccatcaacgggcttcccggcccattgtacaactgctcaagcaaagacacgtttaggctcaaggtgcagcccggaaagatgtacctgctccggctgatcaacgctgcgctcaacgacgagctcttcttctcggtggccaaccacacgctcaccgtcgtcgacgtggacgcctcctacgtcaagccgttcgacacggacgtggtcctcatcacgccggggcagaccaccaacgtgctgctccgcgccaagccgacggccgaggccgccggcgccacgcacctcatgatggcgcgcccctacgccacgggccgccccggcacctacgacaacaccaccgttgccgccgtcctggagtacgcgccaccggggcacatcaagagcctcccgctcctccgcccgtcgctgccggcgctcaacgacacggccttcgccgccggcttcgccgccaagctccgcagcctggcctgcccggactacccgtccaacgtgccgcgccgcgtcgacaagcccttcttcttcgccgtggggctcggcaccaccccgtgcccgggcagcaacaaccagacgtgccagggccccaccaacaccaccaagttcacggcgtccatcaacaacgtctccttcgacatgcccaccaccgcgctcctgcaggcgcactacaccggccagtccgccggcgtgtacaccgccgacttccccgcctcgccgctggagccgttcaactacacgggcacgccgcccaacaacaccaacgtgtcgaacgggaccagggtggtggtgctgccgtacaacgcgagcgtggaggtggtgctgcaggacaccagcatcctgggcgccgagagccacccgctgcacctccacggcttcgacttcttcgtcgtcgggcagggcaccggcaactacgacccgtccaagcacccggcggagttcaacctggtcgacccggtgcagaggaacaccgtcggcgtgccggccggcggctgggtcgccatcaggttcttcgcggataaccctggtgtctggttcatgcattgccacctggaggttcacacaacctgggggttgaagatggcatgggtggtcaacgacggcccgttgcctgagcagaagctgatgcctccgccgtccgatcttcccatgtgctag</cdnaseq>

Protein Sequence

<aaseq>MGARCLALLLLYGTLLLLLLLPQLPLAGAATRYYTFNVKLQNVT RLCNTRAIPTVNGKFPGPKIVTREGDRVVVKVVNNIKDNITIHWHGVRQMRTGWSDGP AYVTQCPIQTGQSYVYNFTINGQRGTLFWHAHVSWLRSTLYGPIIILPKAGLPLPFTE PHKDVPIIFGEWFNADPEAIVAQALQTGGGPNVSDAYTINGLPGPLYNCSSKDTFRLK VQPGKMYLLRLINAALNDELFFSVANHTLTVVDVDASYVKPFDTDVVLITPGQTTNVL LRAKPTAEAAGATHLMMARPYATGRPGTYDNTTVAAVLEYAPPGHIKSLPLLRPSLPA LNDTAFAAGFAAKLRSLACPDYPSNVPRRVDKPFFFAVGLGTTPCPGSNNQTCQGPTN TTKFTASINNVSFDMPTTALLQAHYTGQSAGVYTADFPASPLEPFNYTGTPPNNTNVS NGTRVVVLPYNASVEVVLQDTSILGAESHPLHLHGFDFFVVGQGTGNYDPSKHPAEFN LVDPVQRNTVGVPAGGWVAIRFFADNPGVWFMHCHLEVHTTWGLKMAWVVNDGPLPEQ KLMPPPSDLPMC</aaseq>

Gene Sequence

<dnaseqindica>2196..2326#1138..2106#926..1054#566..810#296..447#87..197#gttctagtatctatagctagctaactgttactgtacctcctcccatatatcatcttcatatttttgcagatcgataagcgagaaaaatgggagcacgctgcctcgcattgcttctcctctatggcacgttgctgctgctgttgctgctgccacagctgccgctcgccggcgcggcgacgagatactacaccttcaatgtgcgtgctgtatctgttcatggatctgaagcaagcagcatatggagtatcgtttggttatcttatcgatcgagttgtttgtctttggctgtttgcaggtgaagcttcagaatgtgacacggctgtgcaacacccgggcaatcccgacggtgaacggcaagttccccgggccgaaaatagtcaccagggagggagaccgcgtcgtcgtcaaggtggtcaacaatatcaaggacaacattaccatccactggtctgcaccctgttcttaattaaatcacttagttacatagagaaaacatatataatcatcgtagagaaatctcagttcttattactttttgtttgccattgttgtacggtgtttgcaggcacggggtgaggcagatgcggacggggtggtcggacgggccggcgtacgtgacgcagtgcccgatccagacggggcagagctacgtgtacaacttcaccatcaacgggcagaggggcaccctgttctggcacgcgcacgtctcctggctgcgatccacgctgtacggccccatcatcatcctccccaaggccggcctcccgttgcccttcaccgagccgcacaaggacgtgcccatcatcttcggtacgctttgctcctaagtcctaactaacatatgctccgttttgcaacgaaaaacacgtatttttttgcgattaatatcgtgtttgagtctatatactatactacggtggtgcaggagagtggtttaacgcggaccctgaggcgatcgtcgcgcaggcgcttcagaccggcggtgggcccaacgtctccgacgcctacaccatcaacgggcttcccggcccattgtacaactgctcaagcaaaggtgagaataggaaagcccatcttggttttgattttattttttgatgggcttttgaagtgtttgttcgtgtttgtgaggggcagacacgtttaggctcaaggtgcagcccggaaagatgtacctgctccggctgatcaacgctgcgctcaacgacgagctcttcttctcggtggccaaccacacgctcaccgtcgtcgacgtggacgcctcctacgtcaagccgttcgacacggacgtggtcctcatcacgccggggcagaccaccaacgtgctgctccgcgccaagccgacggccgaggccgccggcgccacgcacctcatgatggcgcgcccctacgccacgggccgccccggcacctacgacaacaccaccgttgccgccgtcctggagtacgcgccaccggggcacatcaagagcctcccgctcctccgcccgtcgctgccggcgctcaacgacacggccttcgccgccggcttcgccgccaagctccgcagcctggcctgcccggactacccgtccaacgtgccgcgccgcgtcgacaagcccttcttcttcgccgtggggctcggcaccaccccgtgcccgggcagcaacaaccagacgtgccagggccccaccaacaccaccaagttcacggcgtccatcaacaacgtctccttcgacatgcccaccaccgcgctcctgcaggcgcactacaccggccagtccgccggcgtgtacaccgccgacttccccgcctcgccgctggagccgttcaactacacgggcacgccgcccaacaacaccaacgtgtcgaacgggaccagggtggtggtgctgccgtacaacgcgagcgtggaggtggtgctgcaggacaccagcatcctgggcgccgagagccacccgctgcacctccacggcttcgacttcttcgtcgtcgggcagggcaccggcaactacgacccgtccaagcacccggcggagttcaacctggtcgacccggtgcagaggaacaccgtcggcgtgccggccggcggctgggtcgccatcaggttcttcgcggataaccctggtaagaattacgcggcagatcgtacatgtcgttcgacgattttgtgatcgaaaaactatttctcttatacgatgcgaatgacgtggcaggtgtctggttcatgcattgccacctggaggttcacacaacctgggggttgaagatggcatgggtggtcaacgacggcccgttgcctgagcagaagctgatgcctccgccgtccgatcttcccatgtgctagagatcgatcaatcgttgacattatttgaccaaggctgtgattcgtttattccgtttggtttgctacacataatttgtcaatggataatgccgtacgtacatacctgcaggattgaggtcttgttttccattcttccaaaggtgttgtttattcttgtaaggggtttgccattgttttttttttaaattctacaagtacttttagctcgaaagttcggccgtatatggtcaataagaatagtttgactcttacattttgacacccacgatgggctcaatctcagatgactatattacggactagtattttacaagcgcgaactatgtatgatactggactgttacaacaagaattcatataagatcatataagcttgtagtcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0273200, RefSeq:Os03g0273200