Os03g0275500

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Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0275500| Description = Epsin, N-terminal domain containing protein| Version = NM_001056243.1 GI:115452214 GeneID:4332409| Length = 2803 bp|...")
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Gene Name

Os03g0275500

Description

Epsin, N-terminal domain containing protein

Version

NM_001056243.1 GI:115452214 GeneID:4332409

Length

2803 bp

Definition

Oryza sativa Japonica Group Os03g0275500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9364487..9367289

Sequence Coding Region

9364636..9366591

Expression

GEO Profiles:Os03g0275500

Genome Context

<gbrowseImage1> name=NC_008396:9364487..9367289 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9364487..9367289 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgagcacgatccggaaggcgctgggggcggtgaaggaccagaccagcatcggtctggccaaggtcaccagcaacatcgcgccggagctcgacgtgctcatcgtcaaggctaccagccacgacgacgagccggccgaggagcgacacatccgcgagatcctccacctcacctccggctcccgcgcccacgtcgccgccgccgtcgcgggatgctcccggaggctgtcccgcacccgcgactacgtcgtcgcgctcaagtcgctcatgctcgtgcaccgccttctcgccgacggcgacccttccttccaccgcgagctcctgcacgccacgcgcaggggcactcgcctcctcaacctctccgacttccgcgacgaggctcactccggttcatgggaccactctgccttcgtccgtacctatgcgctgtacctcgaccagcgccttgagttcttcctccatgagcgcaagcaaggctccggctccaacgccagttccagtgcaaatggcccgtcaccgcgtgaccgctggggatcacctgacccatatggtcgccggtcaccctcatactcctcaccccctggaaacggaaatgggtatggatatggtggttatgatgattaccgtgagaggaacggcaacaacaacactgatgacaagaagccgccgaccccagtgagagacatgaagccagaacgggtccttgcccgtatgcaccacctgcaacagctgctcgacaggttccttgcttgccgccccacaggtggtgccaagcacagcaggatggtgctggtcgcgctgtatcagattgtgagagagagcttccagctctatgctgatatatgtgaggtgctcgcagtgctgctggataggttctttgacatggagtatgccgagtgcgtgaaggcatttgaggcatatgccagcgccgcaaagcagattgacgagctttgtgcattctatggctggtgtaaggaaactggggtcgctaggtcatcagagtacccagaggtgcagcgtgttaccgataagttgctggagacattggaggaatttatgagggaccgagcaaagcggcccaagagcccacctcgggagcctgagcctgaacctgtaaaggaggaagagcctgagccagatatgaatgaaatcaaggcactgccagcaccagaagactacaaggagcctgaacctgagaaggtggaggaggaagtaaagccagagcccccaccgcaaccccagggtgatttagtggatcttagagaagaaactgtgactgcagatgagcaaggtaaccggcttgctctggccctcttccaagggccacctgcagctggtggaagcaatggctcatgggaggccttcccctcaaatggtggcaatgaggtgacttctgcatggcagaatcctgcagctgagcctgggaaggctgactgggaacttgcccttgtggagacagcgagcaatctgtccaagcagaaggccacaatgacaggtggtatggatccattgctactgaatggtatgtatgatcagggtgccgtgcgccagcatgtcaatgcacaagtgacaactgggagtgccagcagcgttgctctacctccggctggacagaaaacacaagtgctggctctgccagcaccagatggttcaatgcagaatgttggtggagacccgtttgcggcgtcccttagcttcccaccaccgtcctatgttcagatggcagagatggagaagaagcagcagttcttgactcaggaacagatgatgtggcagcagtaccagagggatggcatgcagggccagtcaagcttggccaagctcgatcgggcttacaacaatggcttcgcccccaacccagccatgccttatgggatgcctgcagcatataacacgaaccccatgccaatggcttacactgcaaatactgggtactactaccccacttactga</cdnaseq>

Protein Sequence

<aaseq>MSSSTIRKALGAVKDQTSIGLAKVTSNIAPELDVLIVKATSHDD EPAEERHIREILHLTSGSRAHVAAAVAGCSRRLSRTRDYVVALKSLMLVHRLLADGDP SFHRELLHATRRGTRLLNLSDFRDEAHSGSWDHSAFVRTYALYLDQRLEFFLHERKQG SGSNASSSANGPSPRDRWGSPDPYGRRSPSYSSPPGNGNGYGYGGYDDYRERNGNNNT DDKKPPTPVRDMKPERVLARMHHLQQLLDRFLACRPTGGAKHSRMVLVALYQIVRESF QLYADICEVLAVLLDRFFDMEYAECVKAFEAYASAAKQIDELCAFYGWCKETGVARSS EYPEVQRVTDKLLETLEEFMRDRAKRPKSPPREPEPEPVKEEEPEPDMNEIKALPAPE DYKEPEPEKVEEEVKPEPPPQPQGDLVDLREETVTADEQGNRLALALFQGPPAAGGSN GSWEAFPSNGGNEVTSAWQNPAAEPGKADWELALVETASNLSKQKATMTGGMDPLLLN GMYDQGAVRQHVNAQVTTGSASSVALPPAGQKTQVLALPAPDGSMQNVGGDPFAASLS FPPPSYVQMAEMEKKQQFLTQEQMMWQQYQRDGMQGQSSLAKLDRAYNNGFAPNPAMP YGMPAAYNTNPMPMAYTANTGYYYPTY</aaseq>

Gene Sequence

<dnaseqindica>699..2654#ggaccgcagtttcagacgagccccagagctcccggtctcccaccccaagaggccggagacagagctgagagagagagagagagagagagagaggggaggggagggcgtgtgctcgcgcgccaccgcccggatctcgagctcccggatctaccgcaaaggtaaatctttcgcttggatcgatctcgctcgctagatccgtgcctttttcacgatgaagccggagggcgccggctgccgctttggctgggagagagtagcttcggcttagctacggtttgctgctgctatagatgctgatgataagctaagagtcgactagtagtattaattaatatctctatctagctattcatttcatcggtgttgggtggattccgcgggtgagatctcgcctcccgactccgcggatctcatgctcggtaggtactccgatgggttttgaggatagaaggttgcggaatttcagggatccgcgtttggttttgagcaaatcccgcgctggttttgccctgtttgcgcgagaacagacaacaaacagggcgaagttatctccgattctcatgtgggtgtttgttctgttcagatctaaaccgagcaagaggcggcggctgctgctgctgcggccgcggttgttggtggtttgttggtgaggaggaggaggaggaggaggaggaggaggaggcgcgggcgacggcgagatgtcgtcgagcacgatccggaaggcgctgggggcggtgaaggaccagaccagcatcggtctggccaaggtcaccagcaacatcgcgccggagctcgacgtgctcatcgtcaaggctaccagccacgacgacgagccggccgaggagcgacacatccgcgagatcctccacctcacctccggctcccgcgcccacgtcgccgccgccgtcgcgggatgctcccggaggctgtcccgcacccgcgactacgtcgtcgcgctcaagtcgctcatgctcgtgcaccgccttctcgccgacggcgacccttccttccaccgcgagctcctgcacgccacgcgcaggggcactcgcctcctcaacctctccgacttccgcgacgaggctcactccggttcatgggaccactctgccttcgtccgtacctatgcgctgtacctcgaccagcgccttgagttcttcctccatgagcgcaagcaaggctccggctccaacgccagttccagtgcaaatggcccgtcaccgcgtgaccgctggggatcacctgacccatatggtcgccggtcaccctcatactcctcaccccctggaaacggaaatgggtatggatatggtggttatgatgattaccgtgagaggaacggcaacaacaacactgatgacaagaagccgccgaccccagtgagagacatgaagccagaacgggtccttgcccgtatgcaccacctgcaacagctgctcgacaggttccttgcttgccgccccacaggtggtgccaagcacagcaggatggtgctggtcgcgctgtatcagattgtgagagagagcttccagctctatgctgatatatgtgaggtgctcgcagtgctgctggataggttctttgacatggagtatgccgagtgcgtgaaggcatttgaggcatatgccagcgccgcaaagcagattgacgagctttgtgcattctatggctggtgtaaggaaactggggtcgctaggtcatcagagtacccagaggtgcagcgtgttaccgataagttgctggagacattggaggaatttatgagggaccgagcaaagcggcccaagagcccacctcgggagcctgagcctgaacctgtaaaggaggaagagcctgagccagatatgaatgaaatcaaggcactgccagcaccagaagactacaaggagcctgaacctgagaaggtggaggaggaagtaaagccagagcccccaccgcaaccccagggtgatttagtggatcttagagaagaaactgtgactgcagatgagcaaggtaaccggcttgctctggccctcttccaagggccacctgcagctggtggaagcaatggctcatgggaggccttcccctcaaatggtggcaatgaggtgacttctgcatggcagaatcctgcagctgagcctgggaaggctgactgggaacttgcccttgtggagacagcgagcaatctgtccaagcagaaggccacaatgacaggtggtatggatccattgctactgaatggtatgtatgatcagggtgccgtgcgccagcatgtcaatgcacaagtgacaactgggagtgccagcagcgttgctctacctccggctggacagaaaacacaagtgctggctctgccagcaccagatggttcaatgcagaatgttggtggagacccgtttgcggcgtcccttagcttcccaccaccgtcctatgttcagatggcagagatggagaagaagcagcagttcttgactcaggaacagatgatgtggcagcagtaccagagggatggcatgcagggccagtcaagcttggccaagctcgatcgggcttacaacaatggcttcgcccccaacccagccatgccttatgggatgcctgcagcatataacacgaaccccatgccaatggcttacactgcaaatactgggtactactaccccacttactgagttattctttgttcatccttacagttgctgtgaattttgttctgtatcgtgatctcatagccttggggttgtccagtatcagttgttgttcccctgcctctggatcaaaccttttggtctcttatatgtaattctatttgtttggaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0275500, RefSeq:Os03g0275500