Os03g0276500

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Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0276500| Description = Similar to Heat shock protein 70| Version = NM_001056247.1 GI:115452222 GeneID:4332413| Length = 2910 bp| Definitio...")
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Gene Name

Os03g0276500

Description

Similar to Heat shock protein 70

Version

NM_001056247.1 GI:115452222 GeneID:4332413

Length

2910 bp

Definition

Oryza sativa Japonica Group Os03g0276500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9420829..9423738

Sequence Coding Region

9420936..9421149,9421807..9423545

Expression

GEO Profiles:Os03g0276500

Genome Context

<gbrowseImage1> name=NC_008396:9420829..9423738 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9420829..9423738 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcaagggagacgggccggcgatcggcatcgacctcgggacgacctactcgtgcgtcggcgtgtggcagcacgaccgcgtcgagatcatcgccaacgaccaggggaaccgcaccacgccgtcgtatgtcgcgttcaccgactccgagaggctcatcggcgacgccgccaagaaccaggtcgccatgaaccccatcaacaccgtcttcgatgcgaagcgtctcatcggccggcgtttctctgacacgtcggtgcagagcgacgcgaagctgtggccgttcaaggtgctacccggccccggcgacaagccgatgatcggcgtgcagtacaagggagaggagaagcagttctccgccgaggagatctcgtccatggtgctcaacaagatgaaggagacggccgaggcctatctcggaagcaccgtcaagaacgccgtcgtcaccgtcccggcctacttcaacgactcccagcgccaggccaccaaggacgccggcgtcatctccggcctcaacgtcatgcgcatcatcaacgagcccaccgccgccgccatcgcctacggcctcgacaagaagtcgagcagcgtcggcgagaagaacgtgctcatctttgacctcggcggcggcacattcgatgtctccctcctcaccatcgaggagggcatcttcgaggtgaaggccaccgccggtgacacccaccttggaggcgaggacttcgacaaccggatggtgaaccacttcgtgcaggaattcaagaggaagaacaagaaggacatcacgggcaacccgagggcgctcaggcgtctgaggacggcgtgcgagagggcgaagaggacgctgtcctccaccgcccagaccaccatcgagatcgactccctctacgagggcatcgacttctacaccaccatcacccgcgccaggttcgaggagctcaacatggacctcttccgcaagtgcatggagcccgtggagaagtgcctccgcgacgccaagatggacaagagcaccgtccacgacgtcgtgctcgtcggaggctccacccgtatcccccgcgtgcagcagctgctccaggacttcttcaacgggaaggagctctgcaagagcatcaaccccgacgaggccgtcgcgtacggcgccgccgtgcaggccgccatcctcaccggcgagggcaacgagaaggtccaggacctgctcctcctcgacgtcacgccgctgtctcagggcctcgagacggccggaggcgtcatgaccgtgctgatccccaggaacaccaccatccccaccaagaaggagcaggtcttctccacctactccgacaaccagcccggcgtgctcatccaggtgtacgagggtgagaggacgcggaccaaggacaacaacctgctcggcaagttcgagctctccggcattccgccggcgcccaggggtgtcccccagatcaccgtgtgcttcgacattgacgcgaacggcatcctgaacgtctcggcggaggacaagaccaccgggcagaagaacaagatcaccatcaccaacgacaagggccgtctgagcaaggaggatatcgagaagatggtgcaggaggcggagaagtacaaggcggaggacgaggagcacaagaagaaggtcgacgccaagaactcgctcgagaactacgcctacaacatgcggaacaccatcaaggacgacaagatcgcgtccaagctgccggaggccgacaagaagaagatcgaggacgccatcgacggtgccatcagctggctcgacagcaaccagctcgccgaggccgaggagttcgaggacaagatgaaggagctggagggcgtctgcaaccccatcatcgccaagatgtaccagggcgccggagctgacatggccggaggcatggacgaggatgctccggcggccgccggcggaagcagcggaccagggcccaagatcgaggaagtcgactaa</cdnaseq>

Protein Sequence

<aaseq>MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSY VAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGPG DKPMIGVQYKGEEKQFSAEEISSMVLNKMKETAEAYLGSTVKNAVVTVPAYFNDSQRQ ATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSVGEKNVLIFDLGGGTFDVSLLTI EEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERA KRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDK STVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGNE KVQDLLLLDVTPLSQGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYE GERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKIT ITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKKKVDAKNSLENYAYNMRNTIKDDKIAS KLPEADKKKIEDAIDGAISWLDSNQLAEAEEFEDKMKELEGVCNPIIAKMYQGAGADM AGGMDEDAPAAAGGSSGPGPKIEEVD</aaseq>

Gene Sequence

<dnaseqindica>108..321#979..2717#aaatcgatctctctcctgccatcttcagatcgcatcgattttctccttttcgagtttttttccccttcgcttgagagctttcgacgagagcgagggagagggagatcatggccggcaagggagacgggccggcgatcggcatcgacctcgggacgacctactcgtgcgtcggcgtgtggcagcacgaccgcgtcgagatcatcgccaacgaccaggggaaccgcaccacgccgtcgtatgtcgcgttcaccgactccgagaggctcatcggcgacgccgccaagaaccaggtcgccatgaaccccatcaacaccgtcttcggtaagtagatcgatctgctccccgcctcggcatgttcgattttctatttgtagacttgtgtaaaaaatgttagttgaacatcgctatggatccaccgttttttttctatcaagaactagtagatagatctacttggctggtcgattgaatttcaatatctagctgttgtagttgatcatcgacatgaacccatcggcagctttattaattactagatcgacctactctgctcggctttattaagttgtttgttagtagttgatcatcgccgcactgtctctattaaatactactaaatcgatctgctcggctcggccaattaaatattcaatttttttcgcgctaagttgttagttgaccatcgccatgaaactcatcaacgtaccagatcaatctgcttggctcggccagttaattattataaatttttagtgctaagttgttacttgatcatcgtcctgaacccatcaacacagatagatctgcttggttcggtcagttaaattttaaatttagtgttacttaataagttgttagtgaaaccatcaaggtagatcgacctgctctgctcggttttgtcagttaaaacttaaaatttcaattttcagtgcaaagttattgatcaatgatctgaaacactcgatcgcttgtttgcagatgcgaagcgtctcatcggccggcgtttctctgacacgtcggtgcagagcgacgcgaagctgtggccgttcaaggtgctacccggccccggcgacaagccgatgatcggcgtgcagtacaagggagaggagaagcagttctccgccgaggagatctcgtccatggtgctcaacaagatgaaggagacggccgaggcctatctcggaagcaccgtcaagaacgccgtcgtcaccgtcccggcctacttcaacgactcccagcgccaggccaccaaggacgccggcgtcatctccggcctcaacgtcatgcgcatcatcaacgagcccaccgccgccgccatcgcctacggcctcgacaagaagtcgagcagcgtcggcgagaagaacgtgctcatctttgacctcggcggcggcacattcgatgtctccctcctcaccatcgaggagggcatcttcgaggtgaaggccaccgccggtgacacccaccttggaggcgaggacttcgacaaccggatggtgaaccacttcgtgcaggaattcaagaggaagaacaagaaggacatcacgggcaacccgagggcgctcaggcgtctgaggacggcgtgcgagagggcgaagaggacgctgtcctccaccgcccagaccaccatcgagatcgactccctctacgagggcatcgacttctacaccaccatcacccgcgccaggttcgaggagctcaacatggacctcttccgcaagtgcatggagcccgtggagaagtgcctccgcgacgccaagatggacaagagcaccgtccacgacgtcgtgctcgtcggaggctccacccgtatcccccgcgtgcagcagctgctccaggacttcttcaacgggaaggagctctgcaagagcatcaaccccgacgaggccgtcgcgtacggcgccgccgtgcaggccgccatcctcaccggcgagggcaacgagaaggtccaggacctgctcctcctcgacgtcacgccgctgtctcagggcctcgagacggccggaggcgtcatgaccgtgctgatccccaggaacaccaccatccccaccaagaaggagcaggtcttctccacctactccgacaaccagcccggcgtgctcatccaggtgtacgagggtgagaggacgcggaccaaggacaacaacctgctcggcaagttcgagctctccggcattccgccggcgcccaggggtgtcccccagatcaccgtgtgcttcgacattgacgcgaacggcatcctgaacgtctcggcggaggacaagaccaccgggcagaagaacaagatcaccatcaccaacgacaagggccgtctgagcaaggaggatatcgagaagatggtgcaggaggcggagaagtacaaggcggaggacgaggagcacaagaagaaggtcgacgccaagaactcgctcgagaactacgcctacaacatgcggaacaccatcaaggacgacaagatcgcgtccaagctgccggaggccgacaagaagaagatcgaggacgccatcgacggtgccatcagctggctcgacagcaaccagctcgccgaggccgaggagttcgaggacaagatgaaggagctggagggcgtctgcaaccccatcatcgccaagatgtaccagggcgccggagctgacatggccggaggcatggacgaggatgctccggcggccgccggcggaagcagcggaccagggcccaagatcgaggaagtcgactaaatgatcgatcttttatcgcttttagttatacctgcaataatttgtcgttcgttttacaccgaattcttgagtgctcctgcaacttttttggtacgggctttcattatggccccggttttgctttacttgttaaagtttggattattatggttttattaatatagtattgagtagcaatttataccattgctct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0276500, RefSeq:Os03g0276500