Os03g0276800

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Revision as of 12:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0276800| Description = Heat shock protein Hsp70 family protein| Version = NM_001056250.1 GI:115452228 GeneID:4332416| Length = 4700 bp| De...")
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Gene Name

Os03g0276800

Description

Heat shock protein Hsp70 family protein

Version

NM_001056250.1 GI:115452228 GeneID:4332416

Length

4700 bp

Definition

Oryza sativa Japonica Group Os03g0276800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9428556..9433255

Sequence Coding Region

9428683..9430142,9432990..9433212

Expression

GEO Profiles:Os03g0276800

Genome Context

<gbrowseImage1> name=NC_008396:9428556..9433255 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9428556..9433255 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtttctgccgggcgacgacgacgggccggcggtcggcatcgacctcgggacgacgtactcgtgcgtggccgtgtggcggcgcggccgcgtggaggtgatccccaacgaccagggcaacctcaccacgccgtcctgcgtcgccttcaccgacacctggcgcctcatcggcgacgccgccttgaaccaggccgccatgaatcccctcaacaccatcttcgatgcgaagcgattgatcggccggcgattcagcgacgtgtccgtgcagggagatatcaagctatggcctttcaaggtcacctccggcaaggacgaccggccgatgatcgtggtgcagtacaggggcgaggagaaggagttctccgccgaggagatctccgccatggtgctcttcaagatgaaggagaccgccgaggcctacctcgacaagacggtcgagaaggccgtcatcaccgtgccggtctacttcaacgactcccagcgccaggccaccatggacgccggcgccgtcgccggcctcgacgtcctgcgcatcatcaacgagcccaccgccgccgccgtcgcctacggcctcgacaaggtggtcggcagcagcgacaagaagaagagagtgctgatatttgacctcggcggcggcaccctggacgtgtccgtcctcaacatcgaccccggggtggacatcgacataggcatcttcgaggtgaaggccaccgccggcgacacccacctcggcggcgaggatttcaatggcaggatggtgaagcacctggttcgggagttcctgaggaagtacaagaggccggagatcaggggcgaccagagggcgctccggcggctgaggacggcgtgcgagaaggcgaagaggatgctgtcctccacggcgcagaccaccatcgagatcgactcgctccacggcggcgtcgacttccacgcgaccgtcacacgggccaagttcgaggagctcaacatggacctcttcctcgagtgcatggacaccgtcaagcagtgcctccgcgacgccgggacggacaagggcaccgtcgacgacgtcgtgctcgtcggaggctccacccgcatccccaaggtgcggagcctgctccaggacctgttcgacggcaaggcgctctgcaggagcatcaaccccgacgaggccgtcgcgcacggcgccgccgtcaaggccgccctcctcaacggcgacgccaacgagaaggaccttcgcgacgtggtccttctcgacgtcacgccgctgtcgctcgggatagaggtattcggtggcgggatgtcggtgttgatcccgaggaacaccaccatccccgtaagcaggcagaaaatgtacactacccactacgacaacgagaccgccgtgctcatcaacgtgaacgagggcgaaggccgaagaaccaaggataacaacccgctcggcaagtttgttctcaccggcatcccaccggcgccgaggggcgtgccccagatcaacgtcaccttcagcattgattataacggcatcatgaacgtgtccgcggaggacaagacgacgggacgcagcaacagcatcaccatcaagagcgacaaggggaggctgagcaaggaggagatcgagaggatggtgaagaaggccgagaagtacaaggccgaggatgaggaggagatgaagaaagctgaaggctatgtggcaccctaa</cdnaseq>

Protein Sequence

<aaseq>MGFLPGDDDGPAVGIDLGTTYSCVAVWRRGRVEVIPNDQGNLTT PSCVAFTDTWRLIGDAALNQAAMNPLNTIFDAKRLIGRRFSDVSVQGDIKLWPFKVTS GKDDRPMIVVQYRGEEKEFSAEEISAMVLFKMKETAEAYLDKTVEKAVITVPVYFNDS QRQATMDAGAVAGLDVLRIINEPTAAAVAYGLDKVVGSSDKKKRVLIFDLGGGTLDVS VLNIDPGVDIDIGIFEVKATAGDTHLGGEDFNGRMVKHLVREFLRKYKRPEIRGDQRA LRRLRTACEKAKRMLSSTAQTTIEIDSLHGGVDFHATVTRAKFEELNMDLFLECMDTV KQCLRDAGTDKGTVDDVVLVGGSTRIPKVRSLLQDLFDGKALCRSINPDEAVAHGAAV KAALLNGDANEKDLRDVVLLDVTPLSLGIEVFGGGMSVLIPRNTTIPVSRQKMYTTHY DNETAVLINVNEGEGRRTKDNNPLGKFVLTGIPPAPRGVPQINVTFSIDYNGIMNVSA EDKTTGRSNSITIKSDKGRLSKEEIERMVKKAEKYKAEDEEEMKKAEGYVAP</aaseq>

Gene Sequence

<dnaseqindica>3114..4573#44..266#agcgatcacccaagcaacttctcggctctctccctcggagaagatggggtttctgccgggcgacgacgacgggccggcggtcggcatcgacctcgggacgacgtactcgtgcgtggccgtgtggcggcgcggccgcgtggaggtgatccccaacgaccagggcaacctcaccacgccgtcctgcgtcgccttcaccgacacctggcgcctcatcggcgacgccgccttgaaccaggccgccatgaatcccctcaacaccatcttcggtgagaactcgaactcccttatttgccataatgccatccatcccagtaccaaacgctagtaactactgtaactagtaagtacttgtttagcactattccttttaatttgtagaacaaacatagaaaagtttagactcaatcctatataaaaaaaagtcctataaaatttttgaaatcatattcattctttgaatctatctatctatctatctattctattatattattaaaacagctttgaaagaatgcaccacgtccgctgtggaggctagaaattcccacattaatcggggaaaaagaaaaaatctacaccgttagatcataacatatctagactacaagggttgagatttaatcacaatatatgtaaaagcttgactctttgattctgtttttatgaatcggacacgtgaaagagcgtggagttagattttgatgtgtgctacgcagcagcctttgaaatcaaaatcaaattaggaaacttaatttactgacaggagacaaacacgtcatgtctgcatagctaaattagaaataataaatatgcacaactgacacgtcctgtacaaaatcatatgtaggggagataaaacaactgggcatccgaactccttcaaccacatttaagttttgctctatcgcataatctttagagacggtatgttttttagaaaaaataaattctactccctccatctacttttgatagtcatattttcaaatctgaaaattctatttttgataggcatatttcaattcaacaacctatcatcttaatgactttctcggatttgatgcatgactctccattcttccacacaagattggctacttgagcatcgtgaaatgtaaatattaatgaatcgcttgtttacgaggaatgactagtagcatgtttaaatggatgataagtagaattacttatcattggtctgtgtgccaagatgaaatatgactatcaaaagtagatggagggagcaagtaacaagattcccaatagctttctctatatttagggtccatatgttatagctcatactccgagaatggggcagagctgagaagcgggcggaaatcaccatattaattaaaaaagtgaagtatttaaaggatctagattttaatggtgcatattgattgatataattatatacaaataaaatattctatctattatcttaataaagtaatgtaaaaaaagtctctaagtttgctctcgagacttacaaattctcagattaaaaaaaatctaaatagtttgatcatggtcatgcctataaagaagtagagtggtgacggttgatgggaattctaaaaattaaaaacaaaccaaatagaatcccaatgaggattaagaggagggacgacagatagaccgttaagcagtatggttatagcagttggttggacttatagaaagtaaaaaataaacctaatgataatcatgtacaatttttaaaatatcaaaaacaataaggagaggaggcaccaggcgagccgtagatgagtacattggcaaagccattgacggtttggcagaacttctagaaagtaaaagctgaaccaacacgataattatgttcgttttttaaaaccctaatgataataaagagatgaggcagtgggtgccccatagagaagtacagtggcggtgtttaacaggactttaaaaattatggaagagttcatgcaggaatacaatttataaataaaaaatgctagaatgaaaaatatggaattttcaaaaaaaaaaagaggacaatctagaatacaacaatgacaaacgataataaaaatgagaagcaacatgcctataaagtagtagagatgatggttgatgggacatctagaaattataaacaaaactccaaatagaatcccaattaagattaagaggaggaacacagacatgtcgttaagtagaacgttcacaatggttgagaggaggcagcgggcgagccataaaagagtacgatttggcaggacttctagaaagtaaaaaaacaaaccccaatgataatcatgtataatctttaaaatatcaataataacaaagaggggaagcaacggacgaaccatagaagagtacattggcaaagccgctgaaggtttggcgggacttctagataattatgttcgatttttaaaatctcaatgttaataaagagaggaggcaataaacgggctgtagaggagtacagtggcatcgtttgacgggacttctagataattatgttcgacttttaaaatctcaatgttaataaagagaggaggcagtggacgaaccgtagagcatagaggagtacagtagcagtgtttgacgagacttctaaatattgtaaaaatgaaacctaacaagccaacaaactctaaaaactataaggtataatttttaagttttcaaggagaataaatagaaacaatggtagatcgagcaagcaaataacggagatatgccaaaggagtgagtggtagcgactggcgtgacttttataaactataaaagtagaaacaccgggatgataaggttcagtccaaagtcttaagataacgagataactatttgacaaattttaagtaaaatcatatgtaaaaaatagataattttgtatggatgctagccgcgcaattgcgcgggccacccagctagttcctatataatggataatcttatagatattttagaagaaaattagcgagagctccatcctcatgaaaaaactagtcgtgtttttttttctatttaaacaattattcttgtatttttaacgagttttgcaatcttctatttcgtacttgtgatttttgtaaaaatgttgtgtttttgaatcgattgatttcttgtagatgcgaagcgattgatcggccggcgattcagcgacgtgtccgtgcagggagatatcaagctatggcctttcaaggtcacctccggcaaggacgaccggccgatgatcgtggtgcagtacaggggcgaggagaaggagttctccgccgaggagatctccgccatggtgctcttcaagatgaaggagaccgccgaggcctacctcgacaagacggtcgagaaggccgtcatcaccgtgccggtctacttcaacgactcccagcgccaggccaccatggacgccggcgccgtcgccggcctcgacgtcctgcgcatcatcaacgagcccaccgccgccgccgtcgcctacggcctcgacaaggtggtcggcagcagcgacaagaagaagagagtgctgatatttgacctcggcggcggcaccctggacgtgtccgtcctcaacatcgaccccggggtggacatcgacataggcatcttcgaggtgaaggccaccgccggcgacacccacctcggcggcgaggatttcaatggcaggatggtgaagcacctggttcgggagttcctgaggaagtacaagaggccggagatcaggggcgaccagagggcgctccggcggctgaggacggcgtgcgagaaggcgaagaggatgctgtcctccacggcgcagaccaccatcgagatcgactcgctccacggcggcgtcgacttccacgcgaccgtcacacgggccaagttcgaggagctcaacatggacctcttcctcgagtgcatggacaccgtcaagcagtgcctccgcgacgccgggacggacaagggcaccgtcgacgacgtcgtgctcgtcggaggctccacccgcatccccaaggtgcggagcctgctccaggacctgttcgacggcaaggcgctctgcaggagcatcaaccccgacgaggccgtcgcgcacggcgccgccgtcaaggccgccctcctcaacggcgacgccaacgagaaggaccttcgcgacgtggtccttctcgacgtcacgccgctgtcgctcgggatagaggtattcggtggcgggatgtcggtgttgatcccgaggaacaccaccatccccgtaagcaggcagaaaatgtacactacccactacgacaacgagaccgccgtgctcatcaacgtgaacgagggcgaaggccgaagaaccaaggataacaacccgctcggcaagtttgttctcaccggcatcccaccggcgccgaggggcgtgccccagatcaacgtcaccttcagcattgattataacggcatcatgaacgtgtccgcggaggacaagacgacgggacgcagcaacagcatcaccatcaagagcgacaaggggaggctgagcaaggaggagatcgagaggatggtgaagaaggccgagaagtacaaggccgaggatgaggaggagatgaagaaagctgaaggctatgtggcaccctaaagagaactatatttcttctgcgtcttctgatcatgcacgggcatatgtatggccctaacatgtgccttgtttatgctggaagttggaaccatggcttagttggtgatatggtgggagcatattattg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0276800, RefSeq:Os03g0276800